RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 QRICH2Q9H0J4 1663 aa25.24■■□□□ 1.63
CPNE1-224ENST00000483359 MINK1Q8N4C8 1332 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-224ENST00000483359 CENPJQ9HC77 1338 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-224ENST00000483359 NCOA3Q9Y6Q9 1424 aa25.23■■□□□ 1.63
CPNE1-224ENST00000483359 USP47Q96K76 1375 aa25.23■■□□□ 1.63
CPNE1-224ENST00000483359 IQSEC2Q5JU85 1478 aa25.21■■□□□ 1.63
CPNE1-224ENST00000483359 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.63
CPNE1-224ENST00000483359 CDC42BPGQ6DT37 1551 aa25.17■■□□□ 1.62
CPNE1-224ENST00000483359 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
CPNE1-224ENST00000483359 ATF3P18847 181 aa25.16■■□□□ 1.62
CPNE1-224ENST00000483359 ZEB1P37275 1124 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-224ENST00000483359 ADGRB2O60241 1585 aa25.15■■□□□ 1.62
CPNE1-224ENST00000483359 NUTM2FA1L443 756 aa25.15■■□□□ 1.62
CPNE1-224ENST00000483359 UBAP1LF5GYI3 381 aa25.14■■□□□ 1.62
CPNE1-224ENST00000483359 DCCP43146 1447 aa25.14■■□□□ 1.62
CPNE1-224ENST00000483359 CADPS2Q86UW7 1296 aa25.13■■□□□ 1.61
CPNE1-224ENST00000483359 EIF4G2P78344 907 aaKnown RBP eCLIP25.11■■□□□ 1.61
CPNE1-224ENST00000483359 FMN2Q9NZ56 1722 aa25.1■■□□□ 1.61
CPNE1-224ENST00000483359 TULP4Q9NRJ4 1543 aa25.1■■□□□ 1.61
CPNE1-224ENST00000483359 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
CPNE1-224ENST00000483359 TOM1O60784 492 aa25.09■■□□□ 1.61
CPNE1-224ENST00000483359 HSPA5P11021 654 aaKnown RBP25.09■■□□□ 1.61
CPNE1-224ENST00000483359 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
CPNE1-224ENST00000483359 MST1RQ04912 1400 aa25.09■■□□□ 1.61
CPNE1-224ENST00000483359 WASLO00401 505 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-224ENST00000483359 TESK2Q96S53 571 aa25.06■■□□□ 1.6
CPNE1-224ENST00000483359 CDK19Q9BWU1 502 aa25.06■■□□□ 1.6
CPNE1-224ENST00000483359 SLAIN2Q9P270 581 aa25.06■■□□□ 1.6
CPNE1-224ENST00000483359 SBNO2Q9Y2G9 1366 aa25.06■■□□□ 1.6
CPNE1-224ENST00000483359 SRPK2P78362 688 aaKnown RBP25.05■■□□□ 1.6
CPNE1-224ENST00000483359 C1orf167Q5SNV9 1468 aa25.04■■□□□ 1.6
CPNE1-224ENST00000483359 USP32Q8NFA0 1604 aa25.04■■□□□ 1.6
CPNE1-224ENST00000483359 RGPD8O14715 1765 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-224ENST00000483359 CABP2Q9NPB3 220 aa25.04■■□□□ 1.6
CPNE1-224ENST00000483359 EVC2Q86UK5 1308 aa25.03■■□□□ 1.6
CPNE1-224ENST00000483359 ROBO1Q9Y6N7 1651 aa25.02■■□□□ 1.6
CPNE1-224ENST00000483359 PRR36Q9H6K5 1346 aa25.01■■□□□ 1.59
CPNE1-224ENST00000483359 ATP7BP35670 1465 aa25.01■■□□□ 1.59
CPNE1-224ENST00000483359 DISP3Q9P2K9 1392 aa25■■□□□ 1.59
CPNE1-224ENST00000483359 ORAI2Q96SN7 254 aa25■■□□□ 1.59
CPNE1-224ENST00000483359 ESCO1Q5FWF5 840 aa25■■□□□ 1.59
CPNE1-224ENST00000483359 ANKARQ7Z5J8 1434 aa24.98■■□□□ 1.59
CPNE1-224ENST00000483359 TMF1P82094 1093 aa24.97■■□□□ 1.59
CPNE1-224ENST00000483359 BRINP3Q76B58 766 aa24.97■■□□□ 1.59
CPNE1-224ENST00000483359 NUDT16Q96DE0 195 aaKnown RBP24.97■■□□□ 1.59
CPNE1-224ENST00000483359 ITSN1Q15811 1721 aa24.95■■□□□ 1.58
CPNE1-224ENST00000483359 TOPAZ1Q8N9V7 1692 aa24.94■■□□□ 1.58
CPNE1-224ENST00000483359 PMFBP1Q8TBY8 1022 aa24.93■■□□□ 1.58
CPNE1-224ENST00000483359 FBXO41Q8TF61 875 aa24.93■■□□□ 1.58
CPNE1-224ENST00000483359 DDX17Q92841 729 aaKnown RBP24.92■■□□□ 1.58
CPNE1-224ENST00000483359 POLR3GLQ9BT43 218 aa24.92■■□□□ 1.58
CPNE1-224ENST00000483359 PPIP5K1Q6PFW1 1433 aa24.91■■□□□ 1.58
CPNE1-224ENST00000483359 SLC24A1O60721 1099 aa24.91■■□□□ 1.58
CPNE1-224ENST00000483359 PHF8Q9UPP1 1060 aa24.9■■□□□ 1.58
CPNE1-224ENST00000483359 CCDC61Q9Y6R9 512 aa24.9■■□□□ 1.58
CPNE1-224ENST00000483359 KIF1AQ12756 1690 aa24.9■■□□□ 1.58
CPNE1-224ENST00000483359 ATAD2Q6PL18 1390 aa24.89■■□□□ 1.58
CPNE1-224ENST00000483359 FOXO3O43524 673 aa24.88■■□□□ 1.57
CPNE1-224ENST00000483359 C11orf95C9JLR9 678 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-224ENST00000483359 CABP1Q9NZU7 370 aa24.87■■□□□ 1.57
CPNE1-224ENST00000483359 TMC1Q8TDI8 760 aa24.87■■□□□ 1.57
CPNE1-224ENST00000483359 XPCQ01831 940 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-224ENST00000483359 NHSL1Q5SYE7 1610 aa24.86■■□□□ 1.57
CPNE1-224ENST00000483359 CDCA8Q53HL2 280 aa24.85■■□□□ 1.57
CPNE1-224ENST00000483359 NGDNQ8NEJ9 315 aaKnown RBP24.84■■□□□ 1.57
CPNE1-224ENST00000483359 PHLPP1O60346 1717 aa24.84■■□□□ 1.57
CPNE1-224ENST00000483359 AHDC1Q5TGY3 1603 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-224ENST00000483359 ACEP12821 1306 aa24.82■■□□□ 1.56
CPNE1-224ENST00000483359 NPHP3Q7Z494 1330 aa24.82■■□□□ 1.56
CPNE1-224ENST00000483359 SLC12A5Q9H2X9 1139 aa24.82■■□□□ 1.56
CPNE1-224ENST00000483359 MYOM1P52179 1685 aa24.81■■□□□ 1.56
CPNE1-224ENST00000483359 HSPA1LP34931 641 aa24.81■■□□□ 1.56
CPNE1-224ENST00000483359 KIF7Q2M1P5 1343 aa24.8■■□□□ 1.56
CPNE1-224ENST00000483359 PUS7Q96PZ0 661 aaKnown RBP24.8■■□□□ 1.56
CPNE1-224ENST00000483359 PLEKHG3A1L390 1219 aa24.8■■□□□ 1.56
CPNE1-224ENST00000483359 PSME1Q06323 249 aa24.79■■□□□ 1.56
CPNE1-224ENST00000483359 COL16A1Q07092 1604 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-224ENST00000483359 POLR3AO14802 1390 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-224ENST00000483359 PXDNQ92626 1479 aa24.78■■□□□ 1.56
CPNE1-224ENST00000483359 CD163L1Q9NR16 1453 aa24.76■■□□□ 1.55
CPNE1-224ENST00000483359 KRT28Q7Z3Y7 464 aa24.76■■□□□ 1.55
CPNE1-224ENST00000483359 WASHC2AQ641Q2 1341 aa24.76■■□□□ 1.55
CPNE1-224ENST00000483359 AKAP12Q02952 1782 aa24.75■■□□□ 1.55
CPNE1-224ENST00000483359 SOS2Q07890 1332 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-224ENST00000483359 A0A1W2PP64 1363 aa24.74■■□□□ 1.55
CPNE1-224ENST00000483359 CCDC7Q96M83 1385 aa24.74■■□□□ 1.55
CPNE1-224ENST00000483359 NINLQ9Y2I6 1382 aa24.74■■□□□ 1.55
CPNE1-224ENST00000483359 ILDR1Q86SU0 546 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-224ENST00000483359 PAK3O75914 559 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-224ENST00000483359 KTN1Q86UP2 1357 aaKnown RBP24.72■■□□□ 1.55
CPNE1-224ENST00000483359 USP6P35125 1406 aa24.72■■□□□ 1.55
CPNE1-224ENST00000483359 CPSF1Q10570 1443 aaKnown RBP24.72■■□□□ 1.55
CPNE1-224ENST00000483359 TRPM3Q9HCF6 1732 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-224ENST00000483359 MON2Q7Z3U7 1717 aa24.71■■□□□ 1.55
CPNE1-224ENST00000483359 HDGFL2Q7Z4V5 671 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-224ENST00000483359 TERF2IPQ9NYB0 399 aa24.71■■□□□ 1.55
CPNE1-224ENST00000483359 LMOD2Q6P5Q4 547 aa24.7■■□□□ 1.54
CPNE1-224ENST00000483359 ANKRD36BQ8N2N9 1353 aa24.69■■□□□ 1.54
CPNE1-224ENST00000483359 NRKQ7Z2Y5 1582 aa24.68■■□□□ 1.54
CPNE1-224ENST00000483359 TNS3Q68CZ2 1445 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms