RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 SHPRHQ149N8 1683 aa22.43■■□□□ 1.18
EXOSC3-205ENST00000482614 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
EXOSC3-205ENST00000482614 RGS17Q9UGC6 210 aaPredicted RBP22.42■■□□□ 1.18
EXOSC3-205ENST00000482614 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
EXOSC3-205ENST00000482614 LRRC59Q96AG4 307 aaKnown RBP22.41■■□□□ 1.18
EXOSC3-205ENST00000482614 ORAI2Q96SN7 254 aa22.4■■□□□ 1.18
EXOSC3-205ENST00000482614 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
EXOSC3-205ENST00000482614 DDX17Q92841 729 aaKnown RBP22.39■■□□□ 1.17
EXOSC3-205ENST00000482614 PLEKHH1Q9ULM0 1364 aa22.38■■□□□ 1.17
EXOSC3-205ENST00000482614 ESCO1Q5FWF5 840 aa22.35■■□□□ 1.17
EXOSC3-205ENST00000482614 MEX3CQ5U5Q3 659 aaKnown RBP22.35■■□□□ 1.17
EXOSC3-205ENST00000482614 LRP6O75581 1613 aa22.35■■□□□ 1.17
EXOSC3-205ENST00000482614 SOS2Q07890 1332 aaPredicted RBP22.33■■□□□ 1.17
EXOSC3-205ENST00000482614 DLC1Q96QB1 1528 aa22.33■■□□□ 1.17
EXOSC3-205ENST00000482614 NUTM2BA6NNL0 878 aaPredicted RBP22.32■■□□□ 1.16
EXOSC3-205ENST00000482614 NUTM2EB1AL46 878 aaPredicted RBP22.32■■□□□ 1.16
EXOSC3-205ENST00000482614 POTEAQ6S8J7 498 aa22.32■■□□□ 1.16
EXOSC3-205ENST00000482614 NUTM2AQ8IVF1 878 aaPredicted RBP22.32■■□□□ 1.16
EXOSC3-205ENST00000482614 PRAM1Q96QH2 718 aa22.32■■□□□ 1.16
EXOSC3-205ENST00000482614 ADGRB1O14514 1584 aa22.32■■□□□ 1.16
EXOSC3-205ENST00000482614 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
EXOSC3-205ENST00000482614 PNPLA6Q8IY17 1366 aa22.31■■□□□ 1.16
EXOSC3-205ENST00000482614 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
EXOSC3-205ENST00000482614 POGKQ9P215 609 aa22.31■■□□□ 1.16
EXOSC3-205ENST00000482614 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
EXOSC3-205ENST00000482614 TRAK1Q9UPV9 953 aa22.29■■□□□ 1.16
EXOSC3-205ENST00000482614 SAFB2Q14151 953 aaKnown RBP eCLIP22.28■■□□□ 1.16
EXOSC3-205ENST00000482614 FOXO3O43524 673 aa22.26■■□□□ 1.15
EXOSC3-205ENST00000482614 ZNF772Q68DY9 489 aaPredicted RBP22.26■■□□□ 1.15
EXOSC3-205ENST00000482614 KIF1AQ12756 1690 aa22.23■■□□□ 1.15
EXOSC3-205ENST00000482614 PXDNQ92626 1479 aa22.22■■□□□ 1.15
EXOSC3-205ENST00000482614 KIAA1210Q9ULL0 1709 aa22.22■■□□□ 1.15
EXOSC3-205ENST00000482614 RGPD8O14715 1765 aaPredicted RBP22.22■■□□□ 1.15
EXOSC3-205ENST00000482614 ADGRB2O60241 1585 aa22.21■■□□□ 1.15
EXOSC3-205ENST00000482614 XPCQ01831 940 aaPredicted RBP22.2■■□□□ 1.14
EXOSC3-205ENST00000482614 PHF8Q9UPP1 1060 aa22.2■■□□□ 1.14
EXOSC3-205ENST00000482614 MINK1Q8N4C8 1332 aaPredicted RBP22.19■■□□□ 1.14
EXOSC3-205ENST00000482614 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
EXOSC3-205ENST00000482614 ANKARQ7Z5J8 1434 aa22.18■■□□□ 1.14
EXOSC3-205ENST00000482614 AFF2P51816 1311 aa22.18■■□□□ 1.14
EXOSC3-205ENST00000482614 C8orf37Q96NL8 207 aa22.18■■□□□ 1.14
EXOSC3-205ENST00000482614 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
EXOSC3-205ENST00000482614 ADAMTS2O95450 1211 aa22.17■■□□□ 1.14
EXOSC3-205ENST00000482614 KRT28Q7Z3Y7 464 aa22.17■■□□□ 1.14
EXOSC3-205ENST00000482614 HIRIP3Q9BW71 556 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-205ENST00000482614 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
EXOSC3-205ENST00000482614 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
EXOSC3-205ENST00000482614 WASLO00401 505 aaPredicted RBP22.15■■□□□ 1.14
EXOSC3-205ENST00000482614 PSME1Q06323 249 aa22.15■■□□□ 1.14
EXOSC3-205ENST00000482614 NGLY1Q96IV0 654 aa22.15■■□□□ 1.14
EXOSC3-205ENST00000482614 USP32Q8NFA0 1604 aa22.14■■□□□ 1.14
EXOSC3-205ENST00000482614 SPATA31A3Q5VYP0 1347 aa22.14■■□□□ 1.14
EXOSC3-205ENST00000482614 TRIM26Q12899 539 aaPredicted RBP22.14■■□□□ 1.13
EXOSC3-205ENST00000482614 L3MBTL2Q969R5 705 aa22.14■■□□□ 1.13
EXOSC3-205ENST00000482614 NBPF1Q3BBV0 1214 aa22.13■■□□□ 1.13
EXOSC3-205ENST00000482614 RXRBP28702 533 aa22.12■■□□□ 1.13
EXOSC3-205ENST00000482614 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
EXOSC3-205ENST00000482614 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
EXOSC3-205ENST00000482614 PMFBP1Q8TBY8 1022 aa22.11■■□□□ 1.13
EXOSC3-205ENST00000482614 PRR36Q9H6K5 1346 aa22.09■■□□□ 1.13
EXOSC3-205ENST00000482614 QTRT2Q9H974 415 aaKnown RBP22.09■■□□□ 1.13
EXOSC3-205ENST00000482614 SBNO1A3KN83 1393 aa22.09■■□□□ 1.13
EXOSC3-205ENST00000482614 TNS3Q68CZ2 1445 aa22.08■■□□□ 1.13
EXOSC3-205ENST00000482614 FNBP4Q8N3X1 1017 aaPredicted RBP22.07■■□□□ 1.12
EXOSC3-205ENST00000482614 MARF1Q9Y4F3 1742 aaKnown RBP22.06■■□□□ 1.12
EXOSC3-205ENST00000482614 USP21Q9UK80 565 aa22.06■■□□□ 1.12
EXOSC3-205ENST00000482614 CDK12Q9NYV4 1490 aaPredicted RBP22.05■■□□□ 1.12
EXOSC3-205ENST00000482614 GPRASP1Q5JY77 1395 aa22.05■■□□□ 1.12
EXOSC3-205ENST00000482614 RBM6P78332 1123 aaKnown RBP22.05■■□□□ 1.12
EXOSC3-205ENST00000482614 NUDT16Q96DE0 195 aaKnown RBP22.05■■□□□ 1.12
EXOSC3-205ENST00000482614 CDK19Q9BWU1 502 aa22.05■■□□□ 1.12
EXOSC3-205ENST00000482614 ARHGEF10O15013 1369 aa22.04■■□□□ 1.12
EXOSC3-205ENST00000482614 ITSN1Q15811 1721 aa22.04■■□□□ 1.12
EXOSC3-205ENST00000482614 NGDNQ8NEJ9 315 aaKnown RBP22.04■■□□□ 1.12
EXOSC3-205ENST00000482614 LMOD2Q6P5Q4 547 aa22.03■■□□□ 1.12
EXOSC3-205ENST00000482614 TRPC5Q9UL62 973 aaPredicted RBP22.02■■□□□ 1.12
EXOSC3-205ENST00000482614 CENPJQ9HC77 1338 aaPredicted RBP22.02■■□□□ 1.12
EXOSC3-205ENST00000482614 ATP7BP35670 1465 aa22.02■■□□□ 1.12
EXOSC3-205ENST00000482614 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.11
EXOSC3-205ENST00000482614 HAP1P54257 671 aaPredicted RBP22.01■■□□□ 1.11
EXOSC3-205ENST00000482614 TRPM3Q9HCF6 1732 aaPredicted RBP22■■□□□ 1.11
EXOSC3-205ENST00000482614 CABLES1Q8TDN4 633 aa21.98■■□□□ 1.11
EXOSC3-205ENST00000482614 CCDC61Q9Y6R9 512 aa21.98■■□□□ 1.11
EXOSC3-205ENST00000482614 ROCK2O75116 1388 aaKnown RBP21.97■■□□□ 1.11
EXOSC3-205ENST00000482614 ATRNO75882 1429 aa21.97■■□□□ 1.11
EXOSC3-205ENST00000482614 BCL9LQ86UU0 1499 aa21.96■■□□□ 1.11
EXOSC3-205ENST00000482614 ALS2Q96Q42 1657 aa21.96■■□□□ 1.11
EXOSC3-205ENST00000482614 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
EXOSC3-205ENST00000482614 PLEKHG5O94827 1062 aa21.95■■□□□ 1.1
EXOSC3-205ENST00000482614 SRPK2P78362 688 aaKnown RBP21.95■■□□□ 1.1
EXOSC3-205ENST00000482614 RGS12O14924 1447 aa21.95■■□□□ 1.1
EXOSC3-205ENST00000482614 TOPAZ1Q8N9V7 1692 aa21.95■■□□□ 1.1
EXOSC3-205ENST00000482614 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
EXOSC3-205ENST00000482614 PLEKHG3A1L390 1219 aa21.94■■□□□ 1.1
EXOSC3-205ENST00000482614 PAK3O75914 559 aaPredicted RBP21.94■■□□□ 1.1
EXOSC3-205ENST00000482614 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
EXOSC3-205ENST00000482614 SLIT2O94813 1529 aa21.94■■□□□ 1.1
EXOSC3-205ENST00000482614 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
EXOSC3-205ENST00000482614 NBPF8Q3BBV2 869 aa21.93■■□□□ 1.1
EXOSC3-205ENST00000482614 UNC5CLQ8IV45 518 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 286.7 ms