RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
EXOSC3-205ENST00000482614 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
EXOSC3-205ENST00000482614 ABCC9O60706 1549 aa33.32■■■□□ 2.92
EXOSC3-205ENST00000482614 RB1CC1Q8TDY2 1594 aa31.94■■■□□ 2.7
EXOSC3-205ENST00000482614 NACADO15069 1562 aa31.81■■■□□ 2.68
EXOSC3-205ENST00000482614 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
EXOSC3-205ENST00000482614 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
EXOSC3-205ENST00000482614 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
EXOSC3-205ENST00000482614 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
EXOSC3-205ENST00000482614 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
EXOSC3-205ENST00000482614 PABPN1Q86U42 306 aaKnown RBP eCLIP31.09■■■□□ 2.57
EXOSC3-205ENST00000482614 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.54
EXOSC3-205ENST00000482614 DNAJC5BQ9UF47 199 aa30.89■■■□□ 2.54
EXOSC3-205ENST00000482614 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
EXOSC3-205ENST00000482614 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
EXOSC3-205ENST00000482614 EIF4G1Q04637 1599 aaKnown RBP30.17■■■□□ 2.42
EXOSC3-205ENST00000482614 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.41
EXOSC3-205ENST00000482614 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
EXOSC3-205ENST00000482614 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
EXOSC3-205ENST00000482614 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
EXOSC3-205ENST00000482614 BAZ1AQ9NRL2 1556 aaPredicted RBP29.31■■■□□ 2.28
EXOSC3-205ENST00000482614 ATAD2BQ9ULI0 1458 aa29.31■■■□□ 2.28
EXOSC3-205ENST00000482614 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
EXOSC3-205ENST00000482614 HMGXB3Q12766 1538 aa29.17■■■□□ 2.26
EXOSC3-205ENST00000482614 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
EXOSC3-205ENST00000482614 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
EXOSC3-205ENST00000482614 BAZ1BQ9UIG0 1483 aaKnown RBP29.05■■■□□ 2.24
EXOSC3-205ENST00000482614 WIZO95785 1651 aa28.77■■■□□ 2.2
EXOSC3-205ENST00000482614 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
EXOSC3-205ENST00000482614 NESP48681 1621 aa28.72■■■□□ 2.19
EXOSC3-205ENST00000482614 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
EXOSC3-205ENST00000482614 LAMC3Q9Y6N6 1575 aa28.64■■■□□ 2.18
EXOSC3-205ENST00000482614 CUX2O14529 1486 aa28.59■■■□□ 2.17
EXOSC3-205ENST00000482614 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
EXOSC3-205ENST00000482614 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
EXOSC3-205ENST00000482614 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.15
EXOSC3-205ENST00000482614 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.14
EXOSC3-205ENST00000482614 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
EXOSC3-205ENST00000482614 CFTRP13569 1480 aa28.24■■■□□ 2.11
EXOSC3-205ENST00000482614 MRC2Q9UBG0 1479 aa28.18■■■□□ 2.1
EXOSC3-205ENST00000482614 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
EXOSC3-205ENST00000482614 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
EXOSC3-205ENST00000482614 DNAJC5Q9H3Z4 198 aa28.12■■■□□ 2.09
EXOSC3-205ENST00000482614 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
EXOSC3-205ENST00000482614 WDR62O43379 1518 aa28.08■■■□□ 2.09
EXOSC3-205ENST00000482614 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
EXOSC3-205ENST00000482614 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
EXOSC3-205ENST00000482614 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
EXOSC3-205ENST00000482614 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
EXOSC3-205ENST00000482614 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
EXOSC3-205ENST00000482614 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
EXOSC3-205ENST00000482614 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
EXOSC3-205ENST00000482614 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
EXOSC3-205ENST00000482614 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.98
EXOSC3-205ENST00000482614 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
EXOSC3-205ENST00000482614 OSCARQ8IYS5 282 aa27.37■■□□□ 1.97
EXOSC3-205ENST00000482614 EIF4G3O43432 1585 aaKnown RBP27.34■■□□□ 1.97
EXOSC3-205ENST00000482614 CUX1P39880 1505 aa27.31■■□□□ 1.96
EXOSC3-205ENST00000482614 SOGA1O94964 1423 aa27.31■■□□□ 1.96
EXOSC3-205ENST00000482614 FGD5Q6ZNL6 1462 aa27.28■■□□□ 1.96
EXOSC3-205ENST00000482614 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
EXOSC3-205ENST00000482614 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.962e-6■■■□□ 15.2
EXOSC3-205ENST00000482614 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
EXOSC3-205ENST00000482614 TDRD9Q8NDG6 1382 aaKnown RBP27.17■■□□□ 1.94
EXOSC3-205ENST00000482614 CHD1O14646 1710 aa27.07■■□□□ 1.92
EXOSC3-205ENST00000482614 FBLN2P98095 1184 aa27.04■■□□□ 1.92
EXOSC3-205ENST00000482614 TRIM41Q8WV44 630 aa27.04■■□□□ 1.92
EXOSC3-205ENST00000482614 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
EXOSC3-205ENST00000482614 GRIN2BQ13224 1484 aa27.02■■□□□ 1.92
EXOSC3-205ENST00000482614 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
EXOSC3-205ENST00000482614 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
EXOSC3-205ENST00000482614 TOP2BQ02880 1626 aa27.01■■□□□ 1.91
EXOSC3-205ENST00000482614 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
EXOSC3-205ENST00000482614 MAGI1Q96QZ7 1491 aaPredicted RBP26.98■■□□□ 1.91
EXOSC3-205ENST00000482614 GAPVD1Q14C86 1478 aa26.97■■□□□ 1.91
EXOSC3-205ENST00000482614 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
EXOSC3-205ENST00000482614 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
EXOSC3-205ENST00000482614 CHMP7Q8WUX9 453 aaPredicted RBP26.93■■□□□ 1.9
EXOSC3-205ENST00000482614 RIMBP3CA6NJZ7 1639 aa26.93■■□□□ 1.9
EXOSC3-205ENST00000482614 RIMBP3BA6NNM3 1639 aa26.93■■□□□ 1.9
EXOSC3-205ENST00000482614 RIMBP3Q9UFD9 1639 aa26.93■■□□□ 1.9
EXOSC3-205ENST00000482614 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
EXOSC3-205ENST00000482614 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
EXOSC3-205ENST00000482614 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
EXOSC3-205ENST00000482614 CLASP1Q7Z460 1538 aa26.76■■□□□ 1.87
EXOSC3-205ENST00000482614 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
EXOSC3-205ENST00000482614 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
EXOSC3-205ENST00000482614 ADAMTS12P58397 1594 aa26.68■■□□□ 1.86
EXOSC3-205ENST00000482614 GRIN2AQ12879 1464 aa26.66■■□□□ 1.86
EXOSC3-205ENST00000482614 FHAD1B1AJZ9 1412 aa26.65■■□□□ 1.86
EXOSC3-205ENST00000482614 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
EXOSC3-205ENST00000482614 NUP160Q12769 1436 aa26.56■■□□□ 1.84
EXOSC3-205ENST00000482614 CEP170Q5SW79 1584 aa26.53■■□□□ 1.84
EXOSC3-205ENST00000482614 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
EXOSC3-205ENST00000482614 IGF1RP08069 1367 aa26.44■■□□□ 1.82
EXOSC3-205ENST00000482614 SHROOM2Q13796 1616 aa26.39■■□□□ 1.82
EXOSC3-205ENST00000482614 CUL7Q14999 1698 aa26.38■■□□□ 1.81
EXOSC3-205ENST00000482614 ERCC6L2Q5T890 1561 aa26.35■■□□□ 1.81
EXOSC3-205ENST00000482614 JPH4Q96JJ6 628 aa26.32■■□□□ 1.8
EXOSC3-205ENST00000482614 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms