RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 CFAP70Q5T0N1 1121 aa30.27■■■□□ 2.44
TRA2A-206ENST00000482395 DLC1Q96QB1 1528 aa30.26■■■□□ 2.43
TRA2A-206ENST00000482395 DCAF11Q8TEB1 546 aa30.24■■■□□ 2.43
TRA2A-206ENST00000482395 FMN2Q9NZ56 1722 aa30.23■■■□□ 2.43
TRA2A-206ENST00000482395 WAPLQ7Z5K2 1190 aa30.23■■■□□ 2.43
TRA2A-206ENST00000482395 ADGRB1O14514 1584 aa30.23■■■□□ 2.43
TRA2A-206ENST00000482395 LRRC59Q96AG4 307 aaKnown RBP30.22■■■□□ 2.43
TRA2A-206ENST00000482395 PLEKHH1Q9ULM0 1364 aa30.2■■■□□ 2.43
TRA2A-206ENST00000482395 KDM2AQ9Y2K7 1162 aa30.18■■■□□ 2.42
TRA2A-206ENST00000482395 ORAI2Q96SN7 254 aa30.17■■■□□ 2.42
TRA2A-206ENST00000482395 RGS17Q9UGC6 210 aaPredicted RBP30.17■■■□□ 2.42
TRA2A-206ENST00000482395 LRP6O75581 1613 aa30.17■■■□□ 2.42
TRA2A-206ENST00000482395 KIAA1210Q9ULL0 1709 aa30.16■■■□□ 2.42
TRA2A-206ENST00000482395 KIF1AQ12756 1690 aa30.15■■■□□ 2.42
TRA2A-206ENST00000482395 SOS2Q07890 1332 aaPredicted RBP30.14■■■□□ 2.42
TRA2A-206ENST00000482395 ADGRB2O60241 1585 aa30.12■■■□□ 2.41
TRA2A-206ENST00000482395 DDX17Q92841 729 aaKnown RBP30.12■■■□□ 2.41
TRA2A-206ENST00000482395 NPHP3Q7Z494 1330 aa30.12■■■□□ 2.41
TRA2A-206ENST00000482395 PNPLA6Q8IY17 1366 aa30.12■■■□□ 2.41
TRA2A-206ENST00000482395 ESCO1Q5FWF5 840 aa30.11■■■□□ 2.41
TRA2A-206ENST00000482395 MEX3CQ5U5Q3 659 aaKnown RBP30.1■■■□□ 2.41
TRA2A-206ENST00000482395 PRAM1Q96QH2 718 aa30.1■■■□□ 2.41
TRA2A-206ENST00000482395 POGKQ9P215 609 aa30.09■■■□□ 2.41
TRA2A-206ENST00000482395 RGPD8O14715 1765 aaPredicted RBP30.08■■■□□ 2.41
TRA2A-206ENST00000482395 ARHGEF28Q8N1W1 1705 aaKnown RBP30.07■■■□□ 2.4
TRA2A-206ENST00000482395 COL22A1Q8NFW1 1626 aaPredicted RBP30.06■■■□□ 2.4
TRA2A-206ENST00000482395 TRAK1Q9UPV9 953 aa30.05■■■□□ 2.4
TRA2A-206ENST00000482395 PXDNQ92626 1479 aa30.05■■■□□ 2.4
TRA2A-206ENST00000482395 NUTM2FA1L443 756 aa30.02■■■□□ 2.4
TRA2A-206ENST00000482395 NUTM2BA6NNL0 878 aaPredicted RBP30.02■■■□□ 2.4
TRA2A-206ENST00000482395 NUTM2EB1AL46 878 aaPredicted RBP30.02■■■□□ 2.4
TRA2A-206ENST00000482395 ZNF772Q68DY9 489 aaPredicted RBP30.02■■■□□ 2.4
TRA2A-206ENST00000482395 POTEAQ6S8J7 498 aa30.02■■■□□ 2.4
TRA2A-206ENST00000482395 NUTM2AQ8IVF1 878 aaPredicted RBP30.02■■■□□ 2.4
TRA2A-206ENST00000482395 ANKARQ7Z5J8 1434 aa30.02■■■□□ 2.4
TRA2A-206ENST00000482395 SAFB2Q14151 953 aaKnown RBP eCLIP30.01■■■□□ 2.39
TRA2A-206ENST00000482395 EIF3AQ14152 1382 aaKnown RBP30.01■■■□□ 2.39
TRA2A-206ENST00000482395 FOXO3O43524 673 aa29.99■■■□□ 2.39
TRA2A-206ENST00000482395 USP32Q8NFA0 1604 aa29.97■■■□□ 2.39
TRA2A-206ENST00000482395 PHF8Q9UPP1 1060 aa29.94■■■□□ 2.38
TRA2A-206ENST00000482395 TULP4Q9NRJ4 1543 aa29.94■■■□□ 2.38
TRA2A-206ENST00000482395 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
TRA2A-206ENST00000482395 MARF1Q9Y4F3 1742 aaKnown RBP29.93■■■□□ 2.38
TRA2A-206ENST00000482395 ITSN1Q15811 1721 aa29.92■■■□□ 2.38
TRA2A-206ENST00000482395 MINK1Q8N4C8 1332 aaPredicted RBP29.91■■■□□ 2.38
TRA2A-206ENST00000482395 AFF2P51816 1311 aa29.9■■■□□ 2.38
TRA2A-206ENST00000482395 WASLO00401 505 aaPredicted RBP29.89■■■□□ 2.38
TRA2A-206ENST00000482395 XPCQ01831 940 aaPredicted RBP29.88■■■□□ 2.37
TRA2A-206ENST00000482395 PSME1Q06323 249 aa29.88■■■□□ 2.37
TRA2A-206ENST00000482395 L3MBTL2Q969R5 705 aa29.88■■■□□ 2.37
TRA2A-206ENST00000482395 C8orf37Q96NL8 207 aa29.88■■■□□ 2.37
TRA2A-206ENST00000482395 HIRIP3Q9BW71 556 aaPredicted RBP29.88■■■□□ 2.37
TRA2A-206ENST00000482395 KRT28Q7Z3Y7 464 aa29.87■■■□□ 2.37
TRA2A-206ENST00000482395 SPATA31A3Q5VYP0 1347 aa29.87■■■□□ 2.37
TRA2A-206ENST00000482395 TRPM1Q7Z4N2 1603 aa29.86■■■□□ 2.37
TRA2A-206ENST00000482395 SIN3AQ96ST3 1273 aa29.86■■■□□ 2.37
TRA2A-206ENST00000482395 TNS3Q68CZ2 1445 aa29.86■■■□□ 2.37
TRA2A-206ENST00000482395 SBNO1A3KN83 1393 aa29.84■■■□□ 2.37
TRA2A-206ENST00000482395 ADAMTS2O95450 1211 aa29.83■■■□□ 2.37
TRA2A-206ENST00000482395 NBPF1Q3BBV0 1214 aa29.83■■■□□ 2.37
TRA2A-206ENST00000482395 NGLY1Q96IV0 654 aa29.82■■■□□ 2.36
TRA2A-206ENST00000482395 CDK12Q9NYV4 1490 aaPredicted RBP29.81■■■□□ 2.36
TRA2A-206ENST00000482395 NEUROD1Q13562 356 aa29.81■■■□□ 2.36
TRA2A-206ENST00000482395 ATP7BP35670 1465 aa29.8■■■□□ 2.36
TRA2A-206ENST00000482395 TRPM3Q9HCF6 1732 aaPredicted RBP29.79■■■□□ 2.36
TRA2A-206ENST00000482395 ARHGEF10O15013 1369 aa29.79■■■□□ 2.36
TRA2A-206ENST00000482395 PRR36Q9H6K5 1346 aa29.79■■■□□ 2.36
TRA2A-206ENST00000482395 RXRBP28702 533 aa29.79■■■□□ 2.36
TRA2A-206ENST00000482395 PMFBP1Q8TBY8 1022 aa29.78■■■□□ 2.36
TRA2A-206ENST00000482395 TOPAZ1Q8N9V7 1692 aa29.78■■■□□ 2.36
TRA2A-206ENST00000482395 GPRASP1Q5JY77 1395 aa29.77■■■□□ 2.36
TRA2A-206ENST00000482395 QRICH2Q9H0J4 1663 aa29.77■■■□□ 2.36
TRA2A-206ENST00000482395 ABCA3Q99758 1704 aa29.76■■■□□ 2.35
TRA2A-206ENST00000482395 CENPJQ9HC77 1338 aaPredicted RBP29.75■■■□□ 2.35
TRA2A-206ENST00000482395 FNBP4Q8N3X1 1017 aaPredicted RBP29.75■■■□□ 2.35
TRA2A-206ENST00000482395 ALS2Q96Q42 1657 aa29.75■■■□□ 2.35
TRA2A-206ENST00000482395 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.74■■■□□ 2.35
TRA2A-206ENST00000482395 QTRT2Q9H974 415 aaKnown RBP29.73■■■□□ 2.35
TRA2A-206ENST00000482395 RBM6P78332 1123 aaKnown RBP29.72■■■□□ 2.35
TRA2A-206ENST00000482395 NUDT16Q96DE0 195 aaKnown RBP29.72■■■□□ 2.35
TRA2A-206ENST00000482395 CDK19Q9BWU1 502 aa29.72■■■□□ 2.35
TRA2A-206ENST00000482395 USP21Q9UK80 565 aa29.72■■■□□ 2.35
TRA2A-206ENST00000482395 NGDNQ8NEJ9 315 aaKnown RBP29.71■■■□□ 2.35
TRA2A-206ENST00000482395 ROCK2O75116 1388 aaKnown RBP29.7■■■□□ 2.35
TRA2A-206ENST00000482395 TRPC5Q9UL62 973 aaPredicted RBP29.69■■■□□ 2.34
TRA2A-206ENST00000482395 TONSLQ96HA7 1378 aa29.67■■■□□ 2.34
TRA2A-206ENST00000482395 HAP1P54257 671 aaPredicted RBP29.67■■■□□ 2.34
TRA2A-206ENST00000482395 LMOD2Q6P5Q4 547 aa29.67■■■□□ 2.34
TRA2A-206ENST00000482395 ATRNO75882 1429 aa29.66■■■□□ 2.34
TRA2A-206ENST00000482395 CCDC61Q9Y6R9 512 aa29.66■■■□□ 2.34
TRA2A-206ENST00000482395 NWD2Q9ULI1 1742 aa29.65■■■□□ 2.34
TRA2A-206ENST00000482395 POLR3AO14802 1390 aaPredicted RBP29.64■■■□□ 2.34
TRA2A-206ENST00000482395 BCL9LQ86UU0 1499 aa29.64■■■□□ 2.34
TRA2A-206ENST00000482395 SLIT2O94813 1529 aa29.64■■■□□ 2.34
TRA2A-206ENST00000482395 PLCH1Q4KWH8 1693 aa29.63■■■□□ 2.33
TRA2A-206ENST00000482395 CRYBG1Q9Y4K1 1723 aa29.62■■■□□ 2.33
TRA2A-206ENST00000482395 RGS12O14924 1447 aa29.62■■■□□ 2.33
TRA2A-206ENST00000482395 PLEKHG3A1L390 1219 aa29.61■■■□□ 2.33
TRA2A-206ENST00000482395 SRPK2P78362 688 aaKnown RBP29.6■■■□□ 2.33
TRA2A-206ENST00000482395 CABLES1Q8TDN4 633 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms