RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 PTCH1Q13635 1447 aa12.22□□□□□ -0.45
ERGIC3-214ENST00000482338 NCKAP5LQ9HCH0 1330 aa12.22□□□□□ -0.45
ERGIC3-214ENST00000482338 SAFB2Q14151 953 aaKnown RBP eCLIP12.22□□□□□ -0.45
ERGIC3-214ENST00000482338 PIK3R4Q99570 1358 aa12.21□□□□□ -0.45
ERGIC3-214ENST00000482338 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.45
ERGIC3-214ENST00000482338 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
ERGIC3-214ENST00000482338 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
ERGIC3-214ENST00000482338 USP32Q8NFA0 1604 aa12.2□□□□□ -0.46
ERGIC3-214ENST00000482338 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
ERGIC3-214ENST00000482338 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
ERGIC3-214ENST00000482338 POGKQ9P215 609 aa12.2□□□□□ -0.46
ERGIC3-214ENST00000482338 XIRP1Q702N8 1843 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-214ENST00000482338 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
ERGIC3-214ENST00000482338 HSPA2P54652 639 aa12.19□□□□□ -0.46
ERGIC3-214ENST00000482338 CDCA8Q53HL2 280 aa12.19□□□□□ -0.46
ERGIC3-214ENST00000482338 MIER1Q8N108 512 aa12.19□□□□□ -0.46
ERGIC3-214ENST00000482338 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
ERGIC3-214ENST00000482338 EVC2Q86UK5 1308 aa12.18□□□□□ -0.46
ERGIC3-214ENST00000482338 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
ERGIC3-214ENST00000482338 AMOTL2Q9Y2J4 779 aa12.18□□□□□ -0.46
ERGIC3-214ENST00000482338 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
ERGIC3-214ENST00000482338 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
ERGIC3-214ENST00000482338 CDC42BPGQ6DT37 1551 aa12.15□□□□□ -0.46
ERGIC3-214ENST00000482338 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
ERGIC3-214ENST00000482338 KCNA6P17658 529 aa12.14□□□□□ -0.47
ERGIC3-214ENST00000482338 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
ERGIC3-214ENST00000482338 ATP7BP35670 1465 aa12.14□□□□□ -0.47
ERGIC3-214ENST00000482338 ANP32CO43423 234 aa12.13□□□□□ -0.47
ERGIC3-214ENST00000482338 PUS7Q96PZ0 661 aaKnown RBP12.13□□□□□ -0.47
ERGIC3-214ENST00000482338 PANK3Q9H999 370 aa12.13□□□□□ -0.47
ERGIC3-214ENST00000482338 ATAD2Q6PL18 1390 aa12.13□□□□□ -0.47
ERGIC3-214ENST00000482338 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
ERGIC3-214ENST00000482338 SRPK2P78362 688 aaKnown RBP12.12□□□□□ -0.47
ERGIC3-214ENST00000482338 CDK19Q9BWU1 502 aa12.12□□□□□ -0.47
ERGIC3-214ENST00000482338 CD163L1Q9NR16 1453 aa12.12□□□□□ -0.47
ERGIC3-214ENST00000482338 WASLO00401 505 aaPredicted RBP12.11□□□□□ -0.47
ERGIC3-214ENST00000482338 PER1O15534 1290 aaPredicted RBP12.11□□□□□ -0.47
ERGIC3-214ENST00000482338 NINLQ9Y2I6 1382 aa12.1□□□□□ -0.47
ERGIC3-214ENST00000482338 ADGRL3Q9HAR2 1447 aa12.1□□□□□ -0.47
ERGIC3-214ENST00000482338 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
ERGIC3-214ENST00000482338 TMC1Q8TDI8 760 aa12.09□□□□□ -0.47
ERGIC3-214ENST00000482338 SLC12A5Q9H2X9 1139 aa12.09□□□□□ -0.47
ERGIC3-214ENST00000482338 PRKRIP1Q9H875 184 aaPredicted RBP12.09□□□□□ -0.47
ERGIC3-214ENST00000482338 PPIP5K1Q6PFW1 1433 aa12.09□□□□□ -0.47
ERGIC3-214ENST00000482338 A0A1W2PP64 1363 aa12.08□□□□□ -0.48
ERGIC3-214ENST00000482338 NSD3Q9BZ95 1437 aa12.08□□□□□ -0.48
ERGIC3-214ENST00000482338 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
ERGIC3-214ENST00000482338 CNGB1Q14028 1251 aaPredicted RBP12.07□□□□□ -0.48
ERGIC3-214ENST00000482338 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
ERGIC3-214ENST00000482338 RBM33Q96EV2 1170 aaKnown RBP12.06□□□□□ -0.48
ERGIC3-214ENST00000482338 CARD14Q9BXL6 1004 aa12.06□□□□□ -0.48
ERGIC3-214ENST00000482338 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
ERGIC3-214ENST00000482338 ANKARQ7Z5J8 1434 aa12.05□□□□□ -0.48
ERGIC3-214ENST00000482338 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
ERGIC3-214ENST00000482338 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
ERGIC3-214ENST00000482338 CPSF1Q10570 1443 aaKnown RBP12.04□□□□□ -0.48
ERGIC3-214ENST00000482338 KIF1AQ12756 1690 aa12.04□□□□□ -0.48
ERGIC3-214ENST00000482338 MARF1Q9Y4F3 1742 aaKnown RBP12.04□□□□□ -0.48
ERGIC3-214ENST00000482338 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
ERGIC3-214ENST00000482338 CABP1Q9NZU7 370 aa12.04□□□□□ -0.48
ERGIC3-214ENST00000482338 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
ERGIC3-214ENST00000482338 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
ERGIC3-214ENST00000482338 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
ERGIC3-214ENST00000482338 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
ERGIC3-214ENST00000482338 CC2D1BQ5T0F9 858 aaKnown RBP12.03□□□□□ -0.48
ERGIC3-214ENST00000482338 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.48
ERGIC3-214ENST00000482338 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.49
ERGIC3-214ENST00000482338 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
ERGIC3-214ENST00000482338 PIK3C2AO00443 1686 aa12.02□□□□□ -0.49
ERGIC3-214ENST00000482338 USP54Q70EL1 1684 aa12.02□□□□□ -0.49
ERGIC3-214ENST00000482338 RALBP1Q15311 655 aa12.01□□□□□ -0.49
ERGIC3-214ENST00000482338 TERF2IPQ9NYB0 399 aa12.01□□□□□ -0.49
ERGIC3-214ENST00000482338 ZNF335Q9H4Z2 1342 aaPredicted RBP12.01□□□□□ -0.49
ERGIC3-214ENST00000482338 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
ERGIC3-214ENST00000482338 NCOA3Q9Y6Q9 1424 aa12.01□□□□□ -0.49
ERGIC3-214ENST00000482338 TRPM3Q9HCF6 1732 aaPredicted RBP12□□□□□ -0.49
ERGIC3-214ENST00000482338 CCDC184Q52MB2 194 aa12□□□□□ -0.49
ERGIC3-214ENST00000482338 HDGFL2Q7Z4V5 671 aaPredicted RBP12□□□□□ -0.49
ERGIC3-214ENST00000482338 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
ERGIC3-214ENST00000482338 DCCP43146 1447 aa12□□□□□ -0.49
ERGIC3-214ENST00000482338 EDC4Q6P2E9 1401 aaKnown RBP12□□□□□ -0.49
ERGIC3-214ENST00000482338 C14orf37Q86TY3 774 aa11.99□□□□□ -0.49
ERGIC3-214ENST00000482338 CGNL1Q0VF96 1302 aa11.99□□□□□ -0.49
ERGIC3-214ENST00000482338 NSD2O96028 1365 aa11.99□□□□□ -0.49
ERGIC3-214ENST00000482338 SHPRHQ149N8 1683 aa11.99□□□□□ -0.49
ERGIC3-214ENST00000482338 USP6P35125 1406 aa11.98□□□□□ -0.49
ERGIC3-214ENST00000482338 POLR3AO14802 1390 aaPredicted RBP11.98□□□□□ -0.49
ERGIC3-214ENST00000482338 ACEP12821 1306 aa11.98□□□□□ -0.49
ERGIC3-214ENST00000482338 PLEKHG3A1L390 1219 aa11.98□□□□□ -0.49
ERGIC3-214ENST00000482338 LTBP4Q8N2S1 1624 aa11.97□□□□□ -0.49
ERGIC3-214ENST00000482338 MST1RQ04912 1400 aa11.97□□□□□ -0.49
ERGIC3-214ENST00000482338 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
ERGIC3-214ENST00000482338 BRD4O60885 1362 aaPredicted RBP11.96□□□□□ -0.49
ERGIC3-214ENST00000482338 PMFBP1Q8TBY8 1022 aa11.96□□□□□ -0.49
ERGIC3-214ENST00000482338 ALS2Q96Q42 1657 aa11.96□□□□□ -0.5
ERGIC3-214ENST00000482338 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
ERGIC3-214ENST00000482338 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
ERGIC3-214ENST00000482338 LTN1O94822 1766 aa11.95□□□□□ -0.5
ERGIC3-214ENST00000482338 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
ERGIC3-214ENST00000482338 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms