RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 LRRC59Q96AG4 307 aaKnown RBP15.63■□□□□ 0.09
DDX39B-220ENST00000482195 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
DDX39B-220ENST00000482195 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
DDX39B-220ENST00000482195 PPLO60437 1756 aa15.62■□□□□ 0.09
DDX39B-220ENST00000482195 RGS12O14924 1447 aa15.6■□□□□ 0.09
DDX39B-220ENST00000482195 PTCH1Q13635 1447 aa15.6■□□□□ 0.09
DDX39B-220ENST00000482195 C1orf167Q5SNV9 1468 aa15.6■□□□□ 0.09
DDX39B-220ENST00000482195 ADAMTS2O95450 1211 aa15.59■□□□□ 0.09
DDX39B-220ENST00000482195 NAIPQ13075 1403 aa15.59■□□□□ 0.09
DDX39B-220ENST00000482195 LAMC1P11047 1609 aa15.58■□□□□ 0.09
DDX39B-220ENST00000482195 QTRT2Q9H974 415 aaKnown RBP15.57■□□□□ 0.08
DDX39B-220ENST00000482195 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
DDX39B-220ENST00000482195 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
DDX39B-220ENST00000482195 RBM6P78332 1123 aaKnown RBP15.56■□□□□ 0.08
DDX39B-220ENST00000482195 NGLY1Q96IV0 654 aa15.56■□□□□ 0.08
DDX39B-220ENST00000482195 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
DDX39B-220ENST00000482195 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
DDX39B-220ENST00000482195 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
DDX39B-220ENST00000482195 COL22A1Q8NFW1 1626 aaPredicted RBP15.54■□□□□ 0.08
DDX39B-220ENST00000482195 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
DDX39B-220ENST00000482195 CDC42BPGQ6DT37 1551 aa15.53■□□□□ 0.08
DDX39B-220ENST00000482195 HFM1A2PYH4 1435 aa15.52■□□□□ 0.08
DDX39B-220ENST00000482195 USP21Q9UK80 565 aa15.51■□□□□ 0.07
DDX39B-220ENST00000482195 SOS2Q07890 1332 aaPredicted RBP15.5■□□□□ 0.07
DDX39B-220ENST00000482195 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
DDX39B-220ENST00000482195 PRAG1Q86YV5 1406 aa15.5■□□□□ 0.07
DDX39B-220ENST00000482195 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
DDX39B-220ENST00000482195 IFT172Q9UG01 1749 aa15.49■□□□□ 0.07
DDX39B-220ENST00000482195 ESCO1Q5FWF5 840 aa15.49■□□□□ 0.07
DDX39B-220ENST00000482195 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
DDX39B-220ENST00000482195 TRPC5Q9UL62 973 aaPredicted RBP15.48■□□□□ 0.07
DDX39B-220ENST00000482195 NPHP3Q7Z494 1330 aa15.47■□□□□ 0.07
DDX39B-220ENST00000482195 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
DDX39B-220ENST00000482195 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
DDX39B-220ENST00000482195 PXDNQ92626 1479 aa15.46■□□□□ 0.07
DDX39B-220ENST00000482195 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
DDX39B-220ENST00000482195 STK26Q9P289 416 aa15.46■□□□□ 0.07
DDX39B-220ENST00000482195 MYOM2P54296 1465 aa15.46■□□□□ 0.06
DDX39B-220ENST00000482195 ATRNO75882 1429 aa15.45■□□□□ 0.06
DDX39B-220ENST00000482195 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
DDX39B-220ENST00000482195 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
DDX39B-220ENST00000482195 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
DDX39B-220ENST00000482195 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
DDX39B-220ENST00000482195 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.43■□□□□ 0.06
DDX39B-220ENST00000482195 RGPD8O14715 1765 aaPredicted RBP15.42■□□□□ 0.06
DDX39B-220ENST00000482195 LRPPRCP42704 1394 aaKnown RBP15.42■□□□□ 0.06
DDX39B-220ENST00000482195 FOXO3O43524 673 aa15.42■□□□□ 0.06
DDX39B-220ENST00000482195 WAPLQ7Z5K2 1190 aa15.41■□□□□ 0.06
DDX39B-220ENST00000482195 FNBP4Q8N3X1 1017 aaPredicted RBP15.41■□□□□ 0.06
DDX39B-220ENST00000482195 EP400Q96L91 3159 aa15.41■□□□□ 0.06
DDX39B-220ENST00000482195 PLEKHH1Q9ULM0 1364 aa15.4■□□□□ 0.06
DDX39B-220ENST00000482195 TECPR2O15040 1411 aa15.4■□□□□ 0.06
DDX39B-220ENST00000482195 USP32Q8NFA0 1604 aa15.39■□□□□ 0.05
DDX39B-220ENST00000482195 ANKRD30BQ9BXX2 1392 aa15.39■□□□□ 0.05
DDX39B-220ENST00000482195 TMEM132EQ6IEE7 984 aa15.39■□□□□ 0.05
DDX39B-220ENST00000482195 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
DDX39B-220ENST00000482195 PIK3C2GO75747 1445 aa15.38■□□□□ 0.05
DDX39B-220ENST00000482195 SPATA31E1Q6ZUB1 1445 aa15.38■□□□□ 0.05
DDX39B-220ENST00000482195 PLEKHG5O94827 1062 aa15.38■□□□□ 0.05
DDX39B-220ENST00000482195 BCL9LQ86UU0 1499 aa15.38■□□□□ 0.05
DDX39B-220ENST00000482195 PLCH1Q4KWH8 1693 aa15.38■□□□□ 0.05
DDX39B-220ENST00000482195 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
DDX39B-220ENST00000482195 HAP1P54257 671 aaPredicted RBP15.37■□□□□ 0.05
DDX39B-220ENST00000482195 ABCA3Q99758 1704 aa15.37■□□□□ 0.05
DDX39B-220ENST00000482195 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
DDX39B-220ENST00000482195 GLI3P10071 1580 aa15.36■□□□□ 0.05
DDX39B-220ENST00000482195 SRCAPQ6ZRS2 3230 aa15.36■□□□□ 0.05
DDX39B-220ENST00000482195 GJD4Q96KN9 370 aaPredicted RBP15.35■□□□□ 0.05
DDX39B-220ENST00000482195 ABCC11Q96J66 1382 aa15.35■□□□□ 0.05
DDX39B-220ENST00000482195 RALGAPBQ86X10 1494 aa15.34■□□□□ 0.05
DDX39B-220ENST00000482195 MPHOSPH9Q99550 1183 aa15.34■□□□□ 0.05
DDX39B-220ENST00000482195 UNC5CLQ8IV45 518 aa15.33■□□□□ 0.04
DDX39B-220ENST00000482195 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.04
DDX39B-220ENST00000482195 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.04
DDX39B-220ENST00000482195 SLIT2O94813 1529 aa15.33■□□□□ 0.04
DDX39B-220ENST00000482195 NWD2Q9ULI1 1742 aa15.32■□□□□ 0.04
DDX39B-220ENST00000482195 SAFB2Q14151 953 aaKnown RBP eCLIP15.32■□□□□ 0.04
DDX39B-220ENST00000482195 LMOD2Q6P5Q4 547 aa15.32■□□□□ 0.04
DDX39B-220ENST00000482195 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
DDX39B-220ENST00000482195 CCDC9Q9Y3X0 531 aaKnown RBP15.31■□□□□ 0.04
DDX39B-220ENST00000482195 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
DDX39B-220ENST00000482195 DHX57Q6P158 1386 aaKnown RBP15.29■□□□□ 0.04
DDX39B-220ENST00000482195 PSME1Q06323 249 aa15.29■□□□□ 0.04
DDX39B-220ENST00000482195 CCDC125Q86Z20 511 aa15.29■□□□□ 0.04
DDX39B-220ENST00000482195 NRXN1Q9ULB1 1477 aa15.28■□□□□ 0.04
DDX39B-220ENST00000482195 BLMP54132 1417 aaPredicted RBP15.28■□□□□ 0.04
DDX39B-220ENST00000482195 A0A0G2JS52 829 aa15.28■□□□□ 0.04
DDX39B-220ENST00000482195 MYT1Q01538 1121 aa15.28■□□□□ 0.04
DDX39B-220ENST00000482195 CABLES1Q8TDN4 633 aa15.28■□□□□ 0.04
DDX39B-220ENST00000482195 SF3B2Q13435 895 aaKnown RBP15.27■□□□□ 0.04
DDX39B-220ENST00000482195 CFAP70Q5T0N1 1121 aa15.27■□□□□ 0.04
DDX39B-220ENST00000482195 PRAM1Q96QH2 718 aa15.27■□□□□ 0.04
DDX39B-220ENST00000482195 ARHGEF10O15013 1369 aa15.26■□□□□ 0.03
DDX39B-220ENST00000482195 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
DDX39B-220ENST00000482195 POGKQ9P215 609 aa15.26■□□□□ 0.03
DDX39B-220ENST00000482195 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
DDX39B-220ENST00000482195 ADGRB2O60241 1585 aa15.25■□□□□ 0.03
DDX39B-220ENST00000482195 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
DDX39B-220ENST00000482195 SEPT12Q8IYM1 358 aa15.25■□□□□ 0.03
DDX39B-220ENST00000482195 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms