RNA–Protein interactions for RNA: ENST00000481935.5

ABCD4-211, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-211ENST00000481935 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
ABCD4-211ENST00000481935 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
ABCD4-211ENST00000481935 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
ABCD4-211ENST00000481935 CPS1P31327 1500 aa17.28■□□□□ 0.36
ABCD4-211ENST00000481935 LAMC1P11047 1609 aa17.27■□□□□ 0.36
ABCD4-211ENST00000481935 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.36
ABCD4-211ENST00000481935 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
ABCD4-211ENST00000481935 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
ABCD4-211ENST00000481935 PLEKHH1Q9ULM0 1364 aa17.25■□□□□ 0.35
ABCD4-211ENST00000481935 YTHDC2Q9H6S0 1430 aaKnown RBP17.25■□□□□ 0.35
ABCD4-211ENST00000481935 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
ABCD4-211ENST00000481935 PIP4K2BP78356 416 aa17.25■□□□□ 0.35
ABCD4-211ENST00000481935 ADGRB1O14514 1584 aa17.24■□□□□ 0.35
ABCD4-211ENST00000481935 POLR3GLQ9BT43 218 aa17.24■□□□□ 0.35
ABCD4-211ENST00000481935 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
ABCD4-211ENST00000481935 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
ABCD4-211ENST00000481935 NUTM2FA1L443 756 aa17.21■□□□□ 0.35
ABCD4-211ENST00000481935 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
ABCD4-211ENST00000481935 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
ABCD4-211ENST00000481935 KIAA1210Q9ULL0 1709 aa17.19■□□□□ 0.34
ABCD4-211ENST00000481935 TESK2Q96S53 571 aa17.19■□□□□ 0.34
ABCD4-211ENST00000481935 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
ABCD4-211ENST00000481935 ABCC11Q96J66 1382 aa17.18■□□□□ 0.34
ABCD4-211ENST00000481935 POGKQ9P215 609 aa17.18■□□□□ 0.34
ABCD4-211ENST00000481935 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-211ENST00000481935 MSH6P52701 1360 aa17.17■□□□□ 0.34
ABCD4-211ENST00000481935 PRKRIP1Q9H875 184 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-211ENST00000481935 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
ABCD4-211ENST00000481935 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
ABCD4-211ENST00000481935 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
ABCD4-211ENST00000481935 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
ABCD4-211ENST00000481935 ILDR1Q86SU0 546 aaPredicted RBP17.15■□□□□ 0.34
ABCD4-211ENST00000481935 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
ABCD4-211ENST00000481935 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
ABCD4-211ENST00000481935 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
ABCD4-211ENST00000481935 TECPR2O15040 1411 aa17.14■□□□□ 0.33
ABCD4-211ENST00000481935 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.33
ABCD4-211ENST00000481935 TOM1O60784 492 aa17.14■□□□□ 0.33
ABCD4-211ENST00000481935 ATF3P18847 181 aa17.14■□□□□ 0.33
ABCD4-211ENST00000481935 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-211ENST00000481935 FBXO41Q8TF61 875 aa17.13■□□□□ 0.33
ABCD4-211ENST00000481935 ADGRL3Q9HAR2 1447 aa17.12■□□□□ 0.33
ABCD4-211ENST00000481935 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
ABCD4-211ENST00000481935 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
ABCD4-211ENST00000481935 SLAIN2Q9P270 581 aa17.11■□□□□ 0.33
ABCD4-211ENST00000481935 IQSEC2Q5JU85 1478 aa17.1■□□□□ 0.33
ABCD4-211ENST00000481935 CCDC184Q52MB2 194 aa17.1■□□□□ 0.33
ABCD4-211ENST00000481935 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
ABCD4-211ENST00000481935 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
ABCD4-211ENST00000481935 FAM135BQ49AJ0 1406 aa17.08■□□□□ 0.33
ABCD4-211ENST00000481935 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.33
ABCD4-211ENST00000481935 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.33
ABCD4-211ENST00000481935 MSH5O43196 834 aa17.07■□□□□ 0.32
ABCD4-211ENST00000481935 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
ABCD4-211ENST00000481935 RGPD8O14715 1765 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-211ENST00000481935 TMF1P82094 1093 aa17.07■□□□□ 0.32
ABCD4-211ENST00000481935 DLC1Q96QB1 1528 aa17.06■□□□□ 0.32
ABCD4-211ENST00000481935 NCOA3Q9Y6Q9 1424 aa17.06■□□□□ 0.32
ABCD4-211ENST00000481935 ROBO1Q9Y6N7 1651 aa17.06■□□□□ 0.32
ABCD4-211ENST00000481935 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
ABCD4-211ENST00000481935 MST1RQ04912 1400 aa17.05■□□□□ 0.32
ABCD4-211ENST00000481935 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
ABCD4-211ENST00000481935 QRICH2Q9H0J4 1663 aa17.05■□□□□ 0.32
ABCD4-211ENST00000481935 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
ABCD4-211ENST00000481935 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
ABCD4-211ENST00000481935 HSPA1LP34931 641 aa17.03■□□□□ 0.32
ABCD4-211ENST00000481935 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
ABCD4-211ENST00000481935 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
ABCD4-211ENST00000481935 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
ABCD4-211ENST00000481935 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.32
ABCD4-211ENST00000481935 C1orf167Q5SNV9 1468 aa17.01■□□□□ 0.31
ABCD4-211ENST00000481935 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
ABCD4-211ENST00000481935 DCCP43146 1447 aa17.01■□□□□ 0.31
ABCD4-211ENST00000481935 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
ABCD4-211ENST00000481935 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
ABCD4-211ENST00000481935 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
ABCD4-211ENST00000481935 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
ABCD4-211ENST00000481935 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
ABCD4-211ENST00000481935 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
ABCD4-211ENST00000481935 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
ABCD4-211ENST00000481935 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
ABCD4-211ENST00000481935 FOXO3O43524 673 aa16.98■□□□□ 0.31
ABCD4-211ENST00000481935 MYOM1P52179 1685 aa16.98■□□□□ 0.31
ABCD4-211ENST00000481935 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
ABCD4-211ENST00000481935 PANK3Q9H999 370 aa16.97■□□□□ 0.31
ABCD4-211ENST00000481935 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.31
ABCD4-211ENST00000481935 ADGRB2O60241 1585 aa16.96■□□□□ 0.31
ABCD4-211ENST00000481935 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
ABCD4-211ENST00000481935 PLEKHG5O94827 1062 aa16.96■□□□□ 0.3
ABCD4-211ENST00000481935 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
ABCD4-211ENST00000481935 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
ABCD4-211ENST00000481935 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
ABCD4-211ENST00000481935 RALBP1Q15311 655 aa16.93■□□□□ 0.3
ABCD4-211ENST00000481935 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
ABCD4-211ENST00000481935 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
ABCD4-211ENST00000481935 ATP7BP35670 1465 aa16.92■□□□□ 0.3
ABCD4-211ENST00000481935 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-211ENST00000481935 PHF8Q9UPP1 1060 aa16.92■□□□□ 0.3
ABCD4-211ENST00000481935 EVC2Q86UK5 1308 aa16.91■□□□□ 0.3
ABCD4-211ENST00000481935 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms