RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 ST20-MTHFSA0A0A6YYL1 179 aa29.18■■■□□ 2.26
VPS16-207ENST00000481812 ADGRL3Q9HAR2 1447 aa29.16■■■□□ 2.26
VPS16-207ENST00000481812 ADGRB2O60241 1585 aa29.16■■■□□ 2.26
VPS16-207ENST00000481812 NALCNQ8IZF0 1738 aa29.16■■■□□ 2.26
VPS16-207ENST00000481812 HSPA5P11021 654 aaKnown RBP29.15■■■□□ 2.26
VPS16-207ENST00000481812 SAFB2Q14151 953 aaKnown RBP eCLIP29.13■■■□□ 2.25
VPS16-207ENST00000481812 IQSEC2Q5JU85 1478 aa29.12■■■□□ 2.25
VPS16-207ENST00000481812 TESK2Q96S53 571 aa29.12■■■□□ 2.25
VPS16-207ENST00000481812 C19orf44Q9H6X5 657 aa29.12■■■□□ 2.25
VPS16-207ENST00000481812 DCCP43146 1447 aa29.11■■■□□ 2.25
VPS16-207ENST00000481812 RBM33Q96EV2 1170 aaKnown RBP29.1■■■□□ 2.25
VPS16-207ENST00000481812 CDC42BPGQ6DT37 1551 aa29.09■■■□□ 2.25
VPS16-207ENST00000481812 MINK1Q8N4C8 1332 aaPredicted RBP29.09■■■□□ 2.25
VPS16-207ENST00000481812 C14orf37Q86TY3 774 aa29.08■■■□□ 2.25
VPS16-207ENST00000481812 MSH6P52701 1360 aa29.08■■■□□ 2.25
VPS16-207ENST00000481812 EVC2Q86UK5 1308 aa29.04■■■□□ 2.24
VPS16-207ENST00000481812 WASLO00401 505 aaPredicted RBP29.04■■■□□ 2.24
VPS16-207ENST00000481812 TULP4Q9NRJ4 1543 aa29.03■■■□□ 2.24
VPS16-207ENST00000481812 FMN2Q9NZ56 1722 aa29.03■■■□□ 2.24
VPS16-207ENST00000481812 CERKQ8TCT0 537 aa29.02■■■□□ 2.24
VPS16-207ENST00000481812 PUS7Q96PZ0 661 aaKnown RBP29.02■■■□□ 2.24
VPS16-207ENST00000481812 HIRIP3Q9BW71 556 aaPredicted RBP29.02■■■□□ 2.24
VPS16-207ENST00000481812 TMF1P82094 1093 aa29.01■■■□□ 2.23
VPS16-207ENST00000481812 CADPS2Q86UW7 1296 aa29.01■■■□□ 2.23
VPS16-207ENST00000481812 ATF3P18847 181 aa28.99■■■□□ 2.23
VPS16-207ENST00000481812 CDK19Q9BWU1 502 aa28.99■■■□□ 2.23
VPS16-207ENST00000481812 CDCA8Q53HL2 280 aa28.97■■■□□ 2.23
VPS16-207ENST00000481812 ANKARQ7Z5J8 1434 aa28.96■■■□□ 2.23
VPS16-207ENST00000481812 DISP3Q9P2K9 1392 aa28.94■■■□□ 2.22
VPS16-207ENST00000481812 MST1RQ04912 1400 aa28.93■■■□□ 2.22
VPS16-207ENST00000481812 SRPK2P78362 688 aaKnown RBP28.92■■■□□ 2.22
VPS16-207ENST00000481812 USP32Q8NFA0 1604 aa28.91■■■□□ 2.22
VPS16-207ENST00000481812 ATAD2Q6PL18 1390 aa28.9■■■□□ 2.22
VPS16-207ENST00000481812 ITSN1Q15811 1721 aa28.9■■■□□ 2.22
VPS16-207ENST00000481812 RGPD8O14715 1765 aaPredicted RBP28.9■■■□□ 2.22
VPS16-207ENST00000481812 ATP7BP35670 1465 aa28.9■■■□□ 2.22
VPS16-207ENST00000481812 CABP2Q9NPB3 220 aa28.89■■■□□ 2.22
VPS16-207ENST00000481812 C1orf167Q5SNV9 1468 aa28.89■■■□□ 2.22
VPS16-207ENST00000481812 NUDT16Q96DE0 195 aaKnown RBP28.88■■■□□ 2.21
VPS16-207ENST00000481812 SLAIN2Q9P270 581 aa28.88■■■□□ 2.21
VPS16-207ENST00000481812 TOPAZ1Q8N9V7 1692 aa28.87■■■□□ 2.21
VPS16-207ENST00000481812 TOM1O60784 492 aa28.87■■■□□ 2.21
VPS16-207ENST00000481812 CCDC61Q9Y6R9 512 aa28.87■■■□□ 2.21
VPS16-207ENST00000481812 PRR36Q9H6K5 1346 aa28.87■■■□□ 2.21
VPS16-207ENST00000481812 C11orf95C9JLR9 678 aaPredicted RBP28.86■■■□□ 2.21
VPS16-207ENST00000481812 NINLQ9Y2I6 1382 aa28.83■■■□□ 2.21
VPS16-207ENST00000481812 NUTM2FA1L443 756 aa28.82■■■□□ 2.2
VPS16-207ENST00000481812 CCDC7Q96M83 1385 aa28.81■■■□□ 2.2
VPS16-207ENST00000481812 KIF7Q2M1P5 1343 aa28.81■■■□□ 2.2
VPS16-207ENST00000481812 KIF1AQ12756 1690 aa28.8■■■□□ 2.2
VPS16-207ENST00000481812 PLEKHG3A1L390 1219 aa28.8■■■□□ 2.2
VPS16-207ENST00000481812 UBAP1LF5GYI3 381 aa28.79■■■□□ 2.2
VPS16-207ENST00000481812 PPIP5K1Q6PFW1 1433 aa28.78■■■□□ 2.2
VPS16-207ENST00000481812 WASHC2AQ641Q2 1341 aa28.78■■■□□ 2.2
VPS16-207ENST00000481812 ZNF316A6NFI3 1004 aaPredicted RBP28.78■■■□□ 2.2
VPS16-207ENST00000481812 ESCO1Q5FWF5 840 aa28.77■■■□□ 2.2
VPS16-207ENST00000481812 MYOM1P52179 1685 aa28.77■■■□□ 2.2
VPS16-207ENST00000481812 ORAI2Q96SN7 254 aa28.76■■■□□ 2.19
VPS16-207ENST00000481812 PHF8Q9UPP1 1060 aa28.76■■■□□ 2.19
VPS16-207ENST00000481812 CABP1Q9NZU7 370 aa28.75■■■□□ 2.19
VPS16-207ENST00000481812 BRINP3Q76B58 766 aa28.74■■■□□ 2.19
VPS16-207ENST00000481812 ROBO1Q9Y6N7 1651 aa28.73■■■□□ 2.19
VPS16-207ENST00000481812 POLR3AO14802 1390 aaPredicted RBP28.73■■■□□ 2.19
VPS16-207ENST00000481812 TMC1Q8TDI8 760 aa28.71■■■□□ 2.19
VPS16-207ENST00000481812 SLC12A5Q9H2X9 1139 aa28.71■■■□□ 2.19
VPS16-207ENST00000481812 AKAP12Q02952 1782 aa28.7■■■□□ 2.19
VPS16-207ENST00000481812 POLR3GLQ9BT43 218 aa28.7■■■□□ 2.18
VPS16-207ENST00000481812 PMFBP1Q8TBY8 1022 aa28.69■■■□□ 2.18
VPS16-207ENST00000481812 ZNF692Q9BU19 519 aaPredicted RBP28.69■■■□□ 2.18
VPS16-207ENST00000481812 CPSF1Q10570 1443 aaKnown RBP28.69■■■□□ 2.18
VPS16-207ENST00000481812 ACEP12821 1306 aa28.69■■■□□ 2.18
VPS16-207ENST00000481812 TERF2IPQ9NYB0 399 aa28.68■■■□□ 2.18
VPS16-207ENST00000481812 NHSL1Q5SYE7 1610 aa28.68■■■□□ 2.18
VPS16-207ENST00000481812 CD163L1Q9NR16 1453 aa28.67■■■□□ 2.18
VPS16-207ENST00000481812 ANKRD36BQ8N2N9 1353 aa28.67■■■□□ 2.18
VPS16-207ENST00000481812 NGDNQ8NEJ9 315 aaKnown RBP28.67■■■□□ 2.18
VPS16-207ENST00000481812 NPHP3Q7Z494 1330 aa28.66■■■□□ 2.18
VPS16-207ENST00000481812 BRD4O60885 1362 aaPredicted RBP28.65■■■□□ 2.18
VPS16-207ENST00000481812 HDGFL2Q7Z4V5 671 aaPredicted RBP28.65■■■□□ 2.18
VPS16-207ENST00000481812 AHDC1Q5TGY3 1603 aaPredicted RBP28.65■■■□□ 2.18
VPS16-207ENST00000481812 MON2Q7Z3U7 1717 aa28.64■■■□□ 2.18
VPS16-207ENST00000481812 FOXO3O43524 673 aa28.63■■■□□ 2.17
VPS16-207ENST00000481812 PIP4K2BP78356 416 aa28.63■■■□□ 2.17
VPS16-207ENST00000481812 A0A1W2PP64 1363 aa28.62■■■□□ 2.17
VPS16-207ENST00000481812 USP6P35125 1406 aa28.6■■■□□ 2.17
VPS16-207ENST00000481812 PSME1Q06323 249 aa28.6■■■□□ 2.17
VPS16-207ENST00000481812 SOS2Q07890 1332 aaPredicted RBP28.59■■■□□ 2.17
VPS16-207ENST00000481812 KTN1Q86UP2 1357 aaKnown RBP28.59■■■□□ 2.17
VPS16-207ENST00000481812 SCAF1Q9H7N4 1312 aaKnown RBP28.58■■■□□ 2.17
VPS16-207ENST00000481812 PXDNQ92626 1479 aa28.58■■■□□ 2.17
VPS16-207ENST00000481812 KRT28Q7Z3Y7 464 aa28.57■■■□□ 2.16
VPS16-207ENST00000481812 PANK3Q9H999 370 aa28.57■■■□□ 2.16
VPS16-207ENST00000481812 EDC4Q6P2E9 1401 aaKnown RBP28.57■■■□□ 2.16
VPS16-207ENST00000481812 SSH2Q76I76 1423 aa28.57■■■□□ 2.16
VPS16-207ENST00000481812 TRPM3Q9HCF6 1732 aaPredicted RBP28.57■■■□□ 2.16
VPS16-207ENST00000481812 NRKQ7Z2Y5 1582 aa28.56■■■□□ 2.16
VPS16-207ENST00000481812 SBNO1A3KN83 1393 aa28.55■■■□□ 2.16
VPS16-207ENST00000481812 PHLPP1O60346 1717 aa28.55■■■□□ 2.16
VPS16-207ENST00000481812 FBXO41Q8TF61 875 aa28.54■■■□□ 2.16
VPS16-207ENST00000481812 DDX17Q92841 729 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms