RNA–Protein interactions for RNA: ENST00000481655.2

CTCFL-210, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-210ENST00000481655 PROSER2Q86WR7 435 aaPredicted RBP20.78■□□□□ 0.92
CTCFL-210ENST00000481655 QRICH2Q9H0J4 1663 aa20.77■□□□□ 0.91
CTCFL-210ENST00000481655 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
CTCFL-210ENST00000481655 ZNF335Q9H4Z2 1342 aaPredicted RBP20.75■□□□□ 0.91
CTCFL-210ENST00000481655 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
CTCFL-210ENST00000481655 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
CTCFL-210ENST00000481655 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
CTCFL-210ENST00000481655 PUS7Q96PZ0 661 aaKnown RBP20.72■□□□□ 0.91
CTCFL-210ENST00000481655 KIF7Q2M1P5 1343 aa20.72■□□□□ 0.91
CTCFL-210ENST00000481655 CCDC7Q96M83 1385 aa20.72■□□□□ 0.91
CTCFL-210ENST00000481655 SRPK2P78362 688 aaKnown RBP20.71■□□□□ 0.91
CTCFL-210ENST00000481655 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
CTCFL-210ENST00000481655 WASLO00401 505 aaPredicted RBP20.7■□□□□ 0.9
CTCFL-210ENST00000481655 ADGRL3Q9HAR2 1447 aa20.7■□□□□ 0.9
CTCFL-210ENST00000481655 C11orf95C9JLR9 678 aaPredicted RBP20.69■□□□□ 0.9
CTCFL-210ENST00000481655 TMEM94Q12767 1356 aa20.69■□□□□ 0.9
CTCFL-210ENST00000481655 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
CTCFL-210ENST00000481655 ADGRB2O60241 1585 aa20.68■□□□□ 0.9
CTCFL-210ENST00000481655 ATAD2Q6PL18 1390 aa20.68■□□□□ 0.9
CTCFL-210ENST00000481655 TULP4Q9NRJ4 1543 aa20.67■□□□□ 0.9
CTCFL-210ENST00000481655 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
CTCFL-210ENST00000481655 RBM33Q96EV2 1170 aaKnown RBP20.66■□□□□ 0.9
CTCFL-210ENST00000481655 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
CTCFL-210ENST00000481655 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.65■□□□□ 0.9
CTCFL-210ENST00000481655 LRRC7Q96NW7 1537 aa20.64■□□□□ 0.89
CTCFL-210ENST00000481655 MSH6P52701 1360 aa20.64■□□□□ 0.89
CTCFL-210ENST00000481655 STRCP1A6NGW2 1772 aa20.64■□□□□ 0.89
CTCFL-210ENST00000481655 NINLQ9Y2I6 1382 aa20.63■□□□□ 0.89
CTCFL-210ENST00000481655 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
CTCFL-210ENST00000481655 ATF3P18847 181 aa20.63■□□□□ 0.89
CTCFL-210ENST00000481655 DCCP43146 1447 aa20.62■□□□□ 0.89
CTCFL-210ENST00000481655 TMC1Q8TDI8 760 aa20.61■□□□□ 0.89
CTCFL-210ENST00000481655 CADPS2Q86UW7 1296 aa20.6■□□□□ 0.89
CTCFL-210ENST00000481655 NUDT16Q96DE0 195 aaKnown RBP20.6■□□□□ 0.89
CTCFL-210ENST00000481655 CCDC61Q9Y6R9 512 aa20.6■□□□□ 0.89
CTCFL-210ENST00000481655 ANKARQ7Z5J8 1434 aa20.59■□□□□ 0.89
CTCFL-210ENST00000481655 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
CTCFL-210ENST00000481655 NALCNQ8IZF0 1738 aa20.59■□□□□ 0.89
CTCFL-210ENST00000481655 LTBP4Q8N2S1 1624 aa20.57■□□□□ 0.88
CTCFL-210ENST00000481655 ATP7BP35670 1465 aa20.56■□□□□ 0.88
CTCFL-210ENST00000481655 NUTM2FA1L443 756 aa20.55■□□□□ 0.88
CTCFL-210ENST00000481655 ILDR1Q86SU0 546 aaPredicted RBP20.54■□□□□ 0.88
CTCFL-210ENST00000481655 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
CTCFL-210ENST00000481655 PPIP5K1Q6PFW1 1433 aa20.54■□□□□ 0.88
CTCFL-210ENST00000481655 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
CTCFL-210ENST00000481655 CABP1Q9NZU7 370 aa20.53■□□□□ 0.88
CTCFL-210ENST00000481655 PRR36Q9H6K5 1346 aa20.53■□□□□ 0.88
CTCFL-210ENST00000481655 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
CTCFL-210ENST00000481655 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
CTCFL-210ENST00000481655 PANK3Q9H999 370 aa20.51■□□□□ 0.87
CTCFL-210ENST00000481655 PLEKHG3A1L390 1219 aa20.5■□□□□ 0.87
CTCFL-210ENST00000481655 ANKRD36BQ8N2N9 1353 aa20.5■□□□□ 0.87
CTCFL-210ENST00000481655 ESCO1Q5FWF5 840 aa20.48■□□□□ 0.87
CTCFL-210ENST00000481655 MST1RQ04912 1400 aa20.48■□□□□ 0.87
CTCFL-210ENST00000481655 C1orf167Q5SNV9 1468 aa20.48■□□□□ 0.87
CTCFL-210ENST00000481655 DIEXFQ68CQ4 756 aaKnown RBP20.48■□□□□ 0.87
CTCFL-210ENST00000481655 NGDNQ8NEJ9 315 aaKnown RBP20.48■□□□□ 0.87
CTCFL-210ENST00000481655 ZNF692Q9BU19 519 aaPredicted RBP20.48■□□□□ 0.87
CTCFL-210ENST00000481655 PHF8Q9UPP1 1060 aa20.48■□□□□ 0.87
CTCFL-210ENST00000481655 ITSN1Q15811 1721 aa20.47■□□□□ 0.87
CTCFL-210ENST00000481655 XIRP1Q702N8 1843 aaKnown RBP20.47■□□□□ 0.87
CTCFL-210ENST00000481655 KNSTRNQ9Y448 316 aa20.47■□□□□ 0.87
CTCFL-210ENST00000481655 MYOM1P52179 1685 aa20.46■□□□□ 0.87
CTCFL-210ENST00000481655 USP32Q8NFA0 1604 aa20.46■□□□□ 0.87
CTCFL-210ENST00000481655 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
CTCFL-210ENST00000481655 IQSEC2Q5JU85 1478 aa20.45■□□□□ 0.86
CTCFL-210ENST00000481655 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
CTCFL-210ENST00000481655 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
CTCFL-210ENST00000481655 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
CTCFL-210ENST00000481655 ACEP12821 1306 aa20.44■□□□□ 0.86
CTCFL-210ENST00000481655 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
CTCFL-210ENST00000481655 KTN1Q86UP2 1357 aaKnown RBP20.43■□□□□ 0.86
CTCFL-210ENST00000481655 CPSF1Q10570 1443 aaKnown RBP20.42■□□□□ 0.86
CTCFL-210ENST00000481655 TOM1O60784 492 aa20.42■□□□□ 0.86
CTCFL-210ENST00000481655 ORAI2Q96SN7 254 aa20.42■□□□□ 0.86
CTCFL-210ENST00000481655 NSD3Q9BZ95 1437 aa20.41■□□□□ 0.86
CTCFL-210ENST00000481655 CD163L1Q9NR16 1453 aa20.41■□□□□ 0.86
CTCFL-210ENST00000481655 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
CTCFL-210ENST00000481655 CERKQ8TCT0 537 aa20.4■□□□□ 0.86
CTCFL-210ENST00000481655 CGNL1Q0VF96 1302 aa20.39■□□□□ 0.86
CTCFL-210ENST00000481655 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.85
CTCFL-210ENST00000481655 PSME1Q06323 249 aa20.39■□□□□ 0.85
CTCFL-210ENST00000481655 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.85
CTCFL-210ENST00000481655 BRD4O60885 1362 aaPredicted RBP20.39■□□□□ 0.85
CTCFL-210ENST00000481655 KIF1AQ12756 1690 aa20.38■□□□□ 0.85
CTCFL-210ENST00000481655 USP6P35125 1406 aa20.38■□□□□ 0.85
CTCFL-210ENST00000481655 NPHP3Q7Z494 1330 aa20.37■□□□□ 0.85
CTCFL-210ENST00000481655 ANP32CO43423 234 aa20.37■□□□□ 0.85
CTCFL-210ENST00000481655 FOXO3O43524 673 aa20.37■□□□□ 0.85
CTCFL-210ENST00000481655 BRINP3Q76B58 766 aa20.37■□□□□ 0.85
CTCFL-210ENST00000481655 NSD2O96028 1365 aa20.35■□□□□ 0.85
CTCFL-210ENST00000481655 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
CTCFL-210ENST00000481655 UBAP1LF5GYI3 381 aa20.35■□□□□ 0.85
CTCFL-210ENST00000481655 RGPD8O14715 1765 aaPredicted RBP20.35■□□□□ 0.85
CTCFL-210ENST00000481655 TTC21AQ8NDW8 1320 aa20.35■□□□□ 0.85
CTCFL-210ENST00000481655 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
CTCFL-210ENST00000481655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.33■□□□□ 0.85
CTCFL-210ENST00000481655 TTC21BQ7Z4L5 1316 aa20.33■□□□□ 0.85
CTCFL-210ENST00000481655 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
CTCFL-210ENST00000481655 KRT28Q7Z3Y7 464 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms