RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 SAFB2Q14151 953 aaKnown RBP eCLIP21.67■■□□□ 1.06
ABCF3-213ENST00000480539 PRAM1Q96QH2 718 aa21.67■■□□□ 1.06
ABCF3-213ENST00000480539 C19orf44Q9H6X5 657 aa21.67■■□□□ 1.06
ABCF3-213ENST00000480539 ILDR1Q86SU0 546 aaPredicted RBP21.66■■□□□ 1.06
ABCF3-213ENST00000480539 ATF3P18847 181 aa21.64■■□□□ 1.05
ABCF3-213ENST00000480539 ROBO1Q9Y6N7 1651 aa21.63■■□□□ 1.05
ABCF3-213ENST00000480539 POGKQ9P215 609 aa21.63■■□□□ 1.05
ABCF3-213ENST00000480539 MST1RQ04912 1400 aa21.63■■□□□ 1.05
ABCF3-213ENST00000480539 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
ABCF3-213ENST00000480539 CADPS2Q86UW7 1296 aa21.62■■□□□ 1.05
ABCF3-213ENST00000480539 SIRT1Q96EB6 747 aa21.62■■□□□ 1.05
ABCF3-213ENST00000480539 ADGRB2O60241 1585 aa21.61■■□□□ 1.05
ABCF3-213ENST00000480539 TIMELESSQ9UNS1 1208 aa21.6■■□□□ 1.05
ABCF3-213ENST00000480539 FMN2Q9NZ56 1722 aa21.59■■□□□ 1.05
ABCF3-213ENST00000480539 QRICH2Q9H0J4 1663 aa21.59■■□□□ 1.05
ABCF3-213ENST00000480539 MINK1Q8N4C8 1332 aaPredicted RBP21.58■■□□□ 1.05
ABCF3-213ENST00000480539 SLAIN2Q9P270 581 aa21.58■■□□□ 1.05
ABCF3-213ENST00000480539 HIRIP3Q9BW71 556 aaPredicted RBP21.57■■□□□ 1.04
ABCF3-213ENST00000480539 CARD11Q9BXL7 1154 aa21.57■■□□□ 1.04
ABCF3-213ENST00000480539 C1orf167Q5SNV9 1468 aa21.57■■□□□ 1.04
ABCF3-213ENST00000480539 EIF3AQ14152 1382 aaKnown RBP21.55■■□□□ 1.04
ABCF3-213ENST00000480539 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
ABCF3-213ENST00000480539 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
ABCF3-213ENST00000480539 USP32Q8NFA0 1604 aa21.51■■□□□ 1.03
ABCF3-213ENST00000480539 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
ABCF3-213ENST00000480539 TULP4Q9NRJ4 1543 aa21.5■■□□□ 1.03
ABCF3-213ENST00000480539 HSPA1LP34931 641 aa21.49■■□□□ 1.03
ABCF3-213ENST00000480539 PHLPP1O60346 1717 aa21.49■■□□□ 1.03
ABCF3-213ENST00000480539 AHDC1Q5TGY3 1603 aaPredicted RBP21.48■■□□□ 1.03
ABCF3-213ENST00000480539 NHSL1Q5SYE7 1610 aa21.47■■□□□ 1.03
ABCF3-213ENST00000480539 WASLO00401 505 aaPredicted RBP21.46■■□□□ 1.03
ABCF3-213ENST00000480539 ORAI2Q96SN7 254 aa21.46■■□□□ 1.03
ABCF3-213ENST00000480539 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
ABCF3-213ENST00000480539 ANKARQ7Z5J8 1434 aa21.46■■□□□ 1.03
ABCF3-213ENST00000480539 USP47Q96K76 1375 aa21.45■■□□□ 1.02
ABCF3-213ENST00000480539 ATP7BP35670 1465 aa21.45■■□□□ 1.02
ABCF3-213ENST00000480539 COL16A1Q07092 1604 aaPredicted RBP21.44■■□□□ 1.02
ABCF3-213ENST00000480539 KIF1AQ12756 1690 aa21.44■■□□□ 1.02
ABCF3-213ENST00000480539 ESCO1Q5FWF5 840 aa21.43■■□□□ 1.02
ABCF3-213ENST00000480539 DDX17Q92841 729 aaKnown RBP21.43■■□□□ 1.02
ABCF3-213ENST00000480539 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
ABCF3-213ENST00000480539 TOPAZ1Q8N9V7 1692 aa21.42■■□□□ 1.02
ABCF3-213ENST00000480539 ITSN1Q15811 1721 aa21.41■■□□□ 1.02
ABCF3-213ENST00000480539 CDK19Q9BWU1 502 aa21.41■■□□□ 1.02
ABCF3-213ENST00000480539 SBNO2Q9Y2G9 1366 aa21.4■■□□□ 1.02
ABCF3-213ENST00000480539 SRPK2P78362 688 aaKnown RBP21.38■■□□□ 1.01
ABCF3-213ENST00000480539 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
ABCF3-213ENST00000480539 CABP2Q9NPB3 220 aa21.37■■□□□ 1.01
ABCF3-213ENST00000480539 EVC2Q86UK5 1308 aa21.36■■□□□ 1.01
ABCF3-213ENST00000480539 NUDT16Q96DE0 195 aaKnown RBP21.36■■□□□ 1.01
ABCF3-213ENST00000480539 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
ABCF3-213ENST00000480539 PXDNQ92626 1479 aa21.35■■□□□ 1.01
ABCF3-213ENST00000480539 PMFBP1Q8TBY8 1022 aa21.35■■□□□ 1.01
ABCF3-213ENST00000480539 NPHP3Q7Z494 1330 aa21.34■■□□□ 1.01
ABCF3-213ENST00000480539 XPCQ01831 940 aaPredicted RBP21.34■■□□□ 1.01
ABCF3-213ENST00000480539 FOXO3O43524 673 aa21.33■■□□□ 1.01
ABCF3-213ENST00000480539 PPIP5K1Q6PFW1 1433 aa21.32■■□□□ 1
ABCF3-213ENST00000480539 TESK2Q96S53 571 aa21.32■■□□□ 1
ABCF3-213ENST00000480539 SHPRHQ149N8 1683 aa21.31■■□□□ 1
ABCF3-213ENST00000480539 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
ABCF3-213ENST00000480539 SOS2Q07890 1332 aaPredicted RBP21.29■■□□□ 1
ABCF3-213ENST00000480539 JCADQ9P266 1359 aa21.29■■□□□ 1
ABCF3-213ENST00000480539 CCDC61Q9Y6R9 512 aa21.28■■□□□ 1
ABCF3-213ENST00000480539 ATAD2Q6PL18 1390 aa21.27■■□□□ 1
ABCF3-213ENST00000480539 HSPA5P11021 654 aaKnown RBP21.27■■□□□ 1
ABCF3-213ENST00000480539 NGDNQ8NEJ9 315 aaKnown RBP21.27■■□□□ 1
ABCF3-213ENST00000480539 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
ABCF3-213ENST00000480539 EIF4G2P78344 907 aaKnown RBP eCLIP21.26■□□□□ 0.99
ABCF3-213ENST00000480539 PNPLA6Q8IY17 1366 aa21.25■□□□□ 0.99
ABCF3-213ENST00000480539 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
ABCF3-213ENST00000480539 KRT28Q7Z3Y7 464 aa21.25■□□□□ 0.99
ABCF3-213ENST00000480539 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
ABCF3-213ENST00000480539 TNS3Q68CZ2 1445 aa21.24■□□□□ 0.99
ABCF3-213ENST00000480539 LRRC59Q96AG4 307 aaKnown RBP21.24■□□□□ 0.99
ABCF3-213ENST00000480539 ACEP12821 1306 aa21.24■□□□□ 0.99
ABCF3-213ENST00000480539 TMF1P82094 1093 aa21.23■□□□□ 0.99
ABCF3-213ENST00000480539 PSME1Q06323 249 aa21.23■□□□□ 0.99
ABCF3-213ENST00000480539 PLEKHG3A1L390 1219 aa21.22■□□□□ 0.99
ABCF3-213ENST00000480539 CABP1Q9NZU7 370 aa21.22■□□□□ 0.99
ABCF3-213ENST00000480539 LRP6O75581 1613 aa21.21■□□□□ 0.99
ABCF3-213ENST00000480539 COL22A1Q8NFW1 1626 aaPredicted RBP21.21■□□□□ 0.99
ABCF3-213ENST00000480539 ALS2Q96Q42 1657 aa21.21■□□□□ 0.99
ABCF3-213ENST00000480539 SBNO1A3KN83 1393 aa21.21■□□□□ 0.99
ABCF3-213ENST00000480539 SPATA31A3Q5VYP0 1347 aa21.2■□□□□ 0.98
ABCF3-213ENST00000480539 AKAP12Q02952 1782 aa21.2■□□□□ 0.98
ABCF3-213ENST00000480539 SLC24A1O60721 1099 aa21.19■□□□□ 0.98
ABCF3-213ENST00000480539 MYOM1P52179 1685 aa21.18■□□□□ 0.98
ABCF3-213ENST00000480539 TMC1Q8TDI8 760 aa21.18■□□□□ 0.98
ABCF3-213ENST00000480539 USP6P35125 1406 aa21.18■□□□□ 0.98
ABCF3-213ENST00000480539 NRKQ7Z2Y5 1582 aa21.18■□□□□ 0.98
ABCF3-213ENST00000480539 LMOD2Q6P5Q4 547 aa21.17■□□□□ 0.98
ABCF3-213ENST00000480539 SPATA31A6Q5VVP1 1343 aa21.17■□□□□ 0.98
ABCF3-213ENST00000480539 CD163L1Q9NR16 1453 aa21.17■□□□□ 0.98
ABCF3-213ENST00000480539 MON2Q7Z3U7 1717 aa21.16■□□□□ 0.98
ABCF3-213ENST00000480539 ABCA3Q99758 1704 aa21.16■□□□□ 0.98
ABCF3-213ENST00000480539 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
ABCF3-213ENST00000480539 ARHGEF10O15013 1369 aa21.15■□□□□ 0.98
ABCF3-213ENST00000480539 NUTM2BA6NNL0 878 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-213ENST00000480539 NUTM2EB1AL46 878 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-213ENST00000480539 NUTM2AQ8IVF1 878 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms