RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ATF3P18847 181 aa19.89■□□□□ 0.77
PCIF1-202ENST00000479348 PRAM1Q96QH2 718 aa19.89■□□□□ 0.77
PCIF1-202ENST00000479348 PLEKHH1Q9ULM0 1364 aa19.86■□□□□ 0.77
PCIF1-202ENST00000479348 CARD11Q9BXL7 1154 aa19.86■□□□□ 0.77
PCIF1-202ENST00000479348 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.86■□□□□ 0.77
PCIF1-202ENST00000479348 NALCNQ8IZF0 1738 aa19.84■□□□□ 0.77
PCIF1-202ENST00000479348 ARHGEF28Q8N1W1 1705 aaKnown RBP19.84■□□□□ 0.77
PCIF1-202ENST00000479348 EIF3AQ14152 1382 aaKnown RBP19.84■□□□□ 0.77
PCIF1-202ENST00000479348 SLAIN2Q9P270 581 aa19.83■□□□□ 0.77
PCIF1-202ENST00000479348 CDC42BPGQ6DT37 1551 aa19.82■□□□□ 0.76
PCIF1-202ENST00000479348 CENPJQ9HC77 1338 aaPredicted RBP19.82■□□□□ 0.76
PCIF1-202ENST00000479348 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
PCIF1-202ENST00000479348 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
PCIF1-202ENST00000479348 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
PCIF1-202ENST00000479348 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
PCIF1-202ENST00000479348 MST1RQ04912 1400 aa19.78■□□□□ 0.76
PCIF1-202ENST00000479348 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
PCIF1-202ENST00000479348 WASLO00401 505 aaPredicted RBP19.75■□□□□ 0.75
PCIF1-202ENST00000479348 C1orf167Q5SNV9 1468 aa19.74■□□□□ 0.75
PCIF1-202ENST00000479348 SBNO2Q9Y2G9 1366 aa19.74■□□□□ 0.75
PCIF1-202ENST00000479348 SLC24A1O60721 1099 aa19.74■□□□□ 0.75
PCIF1-202ENST00000479348 HIRIP3Q9BW71 556 aaPredicted RBP19.74■□□□□ 0.75
PCIF1-202ENST00000479348 QRICH2Q9H0J4 1663 aa19.72■□□□□ 0.75
PCIF1-202ENST00000479348 ANKARQ7Z5J8 1434 aa19.72■□□□□ 0.75
PCIF1-202ENST00000479348 FMN2Q9NZ56 1722 aa19.72■□□□□ 0.75
PCIF1-202ENST00000479348 USP47Q96K76 1375 aa19.71■□□□□ 0.75
PCIF1-202ENST00000479348 BRINP3Q76B58 766 aa19.71■□□□□ 0.75
PCIF1-202ENST00000479348 CDK19Q9BWU1 502 aa19.7■□□□□ 0.74
PCIF1-202ENST00000479348 EVC2Q86UK5 1308 aa19.7■□□□□ 0.74
PCIF1-202ENST00000479348 ROBO1Q9Y6N7 1651 aa19.69■□□□□ 0.74
PCIF1-202ENST00000479348 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
PCIF1-202ENST00000479348 ST20-MTHFSA0A0A6YYL1 179 aa19.68■□□□□ 0.74
PCIF1-202ENST00000479348 ESCO1Q5FWF5 840 aa19.68■□□□□ 0.74
PCIF1-202ENST00000479348 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
PCIF1-202ENST00000479348 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
PCIF1-202ENST00000479348 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
PCIF1-202ENST00000479348 SRPK2P78362 688 aaKnown RBP19.64■□□□□ 0.73
PCIF1-202ENST00000479348 NUDT16Q96DE0 195 aaKnown RBP19.64■□□□□ 0.73
PCIF1-202ENST00000479348 TESK2Q96S53 571 aa19.64■□□□□ 0.73
PCIF1-202ENST00000479348 PUS7Q96PZ0 661 aaKnown RBP19.63■□□□□ 0.73
PCIF1-202ENST00000479348 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
PCIF1-202ENST00000479348 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
PCIF1-202ENST00000479348 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
PCIF1-202ENST00000479348 ATP7BP35670 1465 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 HSPA1LP34931 641 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
PCIF1-202ENST00000479348 PHF8Q9UPP1 1060 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
PCIF1-202ENST00000479348 KIF1AQ12756 1690 aa19.61■□□□□ 0.73
PCIF1-202ENST00000479348 TMF1P82094 1093 aa19.6■□□□□ 0.73
PCIF1-202ENST00000479348 CABP2Q9NPB3 220 aa19.6■□□□□ 0.73
PCIF1-202ENST00000479348 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
PCIF1-202ENST00000479348 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.73
PCIF1-202ENST00000479348 FOXO3O43524 673 aa19.58■□□□□ 0.73
PCIF1-202ENST00000479348 HSPA5P11021 654 aaKnown RBP19.58■□□□□ 0.73
PCIF1-202ENST00000479348 RGPD8O14715 1765 aaPredicted RBP19.58■□□□□ 0.73
PCIF1-202ENST00000479348 ITSN1Q15811 1721 aa19.58■□□□□ 0.73
PCIF1-202ENST00000479348 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
PCIF1-202ENST00000479348 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
PCIF1-202ENST00000479348 PHLPP1O60346 1717 aa19.57■□□□□ 0.72
PCIF1-202ENST00000479348 SOS2Q07890 1332 aaPredicted RBP19.57■□□□□ 0.72
PCIF1-202ENST00000479348 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
PCIF1-202ENST00000479348 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
PCIF1-202ENST00000479348 PSME1Q06323 249 aa19.54■□□□□ 0.72
PCIF1-202ENST00000479348 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
PCIF1-202ENST00000479348 DDX17Q92841 729 aaKnown RBP19.54■□□□□ 0.72
PCIF1-202ENST00000479348 TOPAZ1Q8N9V7 1692 aa19.54■□□□□ 0.72
PCIF1-202ENST00000479348 COL16A1Q07092 1604 aaPredicted RBP19.54■□□□□ 0.72
PCIF1-202ENST00000479348 PPIP5K1Q6PFW1 1433 aa19.54■□□□□ 0.72
PCIF1-202ENST00000479348 POLR3AO14802 1390 aaPredicted RBP19.53■□□□□ 0.72
PCIF1-202ENST00000479348 KRT28Q7Z3Y7 464 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 PXDNQ92626 1479 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 ACEP12821 1306 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 DISP3Q9P2K9 1392 aa19.51■□□□□ 0.71
PCIF1-202ENST00000479348 JCADQ9P266 1359 aa19.51■□□□□ 0.71
PCIF1-202ENST00000479348 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
PCIF1-202ENST00000479348 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
PCIF1-202ENST00000479348 SBNO1A3KN83 1393 aa19.49■□□□□ 0.71
PCIF1-202ENST00000479348 BRD4O60885 1362 aaPredicted RBP19.49■□□□□ 0.71
PCIF1-202ENST00000479348 XPCQ01831 940 aaPredicted RBP19.48■□□□□ 0.71
PCIF1-202ENST00000479348 SPATA31A3Q5VYP0 1347 aa19.46■□□□□ 0.71
PCIF1-202ENST00000479348 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
PCIF1-202ENST00000479348 TERF2IPQ9NYB0 399 aa19.46■□□□□ 0.71
PCIF1-202ENST00000479348 CPSF1Q10570 1443 aaKnown RBP19.45■□□□□ 0.7
PCIF1-202ENST00000479348 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
PCIF1-202ENST00000479348 SPATA31A6Q5VVP1 1343 aa19.45■□□□□ 0.7
PCIF1-202ENST00000479348 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
PCIF1-202ENST00000479348 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
PCIF1-202ENST00000479348 HDGFL2Q7Z4V5 671 aaPredicted RBP19.44■□□□□ 0.7
PCIF1-202ENST00000479348 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
PCIF1-202ENST00000479348 SHPRHQ149N8 1683 aa19.43■□□□□ 0.7
PCIF1-202ENST00000479348 USP6P35125 1406 aa19.43■□□□□ 0.7
PCIF1-202ENST00000479348 TRPM3Q9HCF6 1732 aaPredicted RBP19.41■□□□□ 0.7
PCIF1-202ENST00000479348 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
PCIF1-202ENST00000479348 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
PCIF1-202ENST00000479348 ANKRD36BQ8N2N9 1353 aa19.39■□□□□ 0.69
PCIF1-202ENST00000479348 SSH2Q76I76 1423 aa19.39■□□□□ 0.69
PCIF1-202ENST00000479348 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms