RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 UNC5CLQ8IV45 518 aa22.19■■□□□ 1.14
USP11-207ENST00000478596 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.19■■□□□ 1.14
USP11-207ENST00000478596 IQGAP3Q86VI3 1631 aa22.18■■□□□ 1.14
USP11-207ENST00000478596 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
USP11-207ENST00000478596 SLIT2O94813 1529 aa22.16■■□□□ 1.14
USP11-207ENST00000478596 NPHP3Q7Z494 1330 aa22.16■■□□□ 1.14
USP11-207ENST00000478596 SEPT12Q8IYM1 358 aa22.15■■□□□ 1.14
USP11-207ENST00000478596 PXDNQ92626 1479 aa22.14■■□□□ 1.13
USP11-207ENST00000478596 ONECUT3O60422 494 aaPredicted RBP22.12■■□□□ 1.13
USP11-207ENST00000478596 BAG6P46379 1132 aa22.12■■□□□ 1.13
USP11-207ENST00000478596 YY1P25490 414 aa22.11■■□□□ 1.13
USP11-207ENST00000478596 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
USP11-207ENST00000478596 BRWD3Q6RI45 1802 aa22.1■■□□□ 1.13
USP11-207ENST00000478596 PRAG1Q86YV5 1406 aa22.1■■□□□ 1.13
USP11-207ENST00000478596 KRT27Q7Z3Y8 459 aa22.09■■□□□ 1.13
USP11-207ENST00000478596 ZNF326Q5BKZ1 582 aaKnown RBP22.08■■□□□ 1.13
USP11-207ENST00000478596 VPS72Q15906 364 aa22.07■■□□□ 1.12
USP11-207ENST00000478596 ESCO1Q5FWF5 840 aa22.06■■□□□ 1.12
USP11-207ENST00000478596 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
USP11-207ENST00000478596 HFM1A2PYH4 1435 aa22.05■■□□□ 1.12
USP11-207ENST00000478596 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
USP11-207ENST00000478596 FOXO3O43524 673 aa22.04■■□□□ 1.12
USP11-207ENST00000478596 NEXMIFQ5QGS0 1516 aa22.03■■□□□ 1.12
USP11-207ENST00000478596 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
USP11-207ENST00000478596 R3HDM1Q15032 1099 aaKnown RBP22.03■■□□□ 1.12
USP11-207ENST00000478596 NUP155O75694 1391 aa22■■□□□ 1.11
USP11-207ENST00000478596 CDC42BPGQ6DT37 1551 aa22■■□□□ 1.11
USP11-207ENST00000478596 USP32Q8NFA0 1604 aa21.99■■□□□ 1.11
USP11-207ENST00000478596 EN1Q05925 392 aaPredicted RBP21.99■■□□□ 1.11
USP11-207ENST00000478596 FAM50AQ14320 339 aaKnown RBP21.99■■□□□ 1.11
USP11-207ENST00000478596 SPATA31A3Q5VYP0 1347 aa21.99■■□□□ 1.11
USP11-207ENST00000478596 DISP2A7MBM2 1401 aa21.97■■□□□ 1.11
USP11-207ENST00000478596 CCDC9Q9Y3X0 531 aaKnown RBP21.95■■□□□ 1.1
USP11-207ENST00000478596 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
USP11-207ENST00000478596 NWD2Q9ULI1 1742 aa21.92■■□□□ 1.1
USP11-207ENST00000478596 VGFO15240 615 aaPredicted RBP21.92■■□□□ 1.1
USP11-207ENST00000478596 CCDC144AA2RUR9 1427 aa21.91■■□□□ 1.1
USP11-207ENST00000478596 RGPD1P0DJD0 1748 aa21.91■■□□□ 1.1
USP11-207ENST00000478596 NAIPQ13075 1403 aa21.89■■□□□ 1.09
USP11-207ENST00000478596 A0A0G2JS52 829 aa21.88■■□□□ 1.09
USP11-207ENST00000478596 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
USP11-207ENST00000478596 MYT1Q01538 1121 aa21.88■■□□□ 1.09
USP11-207ENST00000478596 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
USP11-207ENST00000478596 FAM98CQ17RN3 349 aaKnown RBP21.87■■□□□ 1.09
USP11-207ENST00000478596 CLTCL1P53675 1640 aa21.87■■□□□ 1.09
USP11-207ENST00000478596 EZH2Q15910 746 aaKnown RBP21.86■■□□□ 1.09
USP11-207ENST00000478596 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
USP11-207ENST00000478596 KRT28Q7Z3Y7 464 aa21.86■■□□□ 1.09
USP11-207ENST00000478596 CAMKK2Q96RR4 588 aa21.85■■□□□ 1.09
USP11-207ENST00000478596 TNS3Q68CZ2 1445 aa21.85■■□□□ 1.09
USP11-207ENST00000478596 CABLES1Q8TDN4 633 aa21.84■■□□□ 1.09
USP11-207ENST00000478596 PARD3Q8TEW0 1356 aa21.84■■□□□ 1.09
USP11-207ENST00000478596 KIF1AQ12756 1690 aa21.83■■□□□ 1.09
USP11-207ENST00000478596 NUTM2FA1L443 756 aa21.83■■□□□ 1.09
USP11-207ENST00000478596 FAM83GA6ND36 823 aa21.83■■□□□ 1.09
USP11-207ENST00000478596 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
USP11-207ENST00000478596 TNS1Q9HBL0 1735 aaKnown RBP21.82■■□□□ 1.08
USP11-207ENST00000478596 FAM182BQ5T319 152 aa21.81■■□□□ 1.08
USP11-207ENST00000478596 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
USP11-207ENST00000478596 ADGRB2O60241 1585 aa21.8■■□□□ 1.08
USP11-207ENST00000478596 NINLQ9Y2I6 1382 aa21.8■■□□□ 1.08
USP11-207ENST00000478596 PSME1Q06323 249 aa21.8■■□□□ 1.08
USP11-207ENST00000478596 TECPR2O15040 1411 aa21.8■■□□□ 1.08
USP11-207ENST00000478596 SBNO1A3KN83 1393 aa21.79■■□□□ 1.08
USP11-207ENST00000478596 ARHGEF10O15013 1369 aa21.78■■□□□ 1.08
USP11-207ENST00000478596 NRAPQ86VF7 1730 aa21.77■■□□□ 1.08
USP11-207ENST00000478596 KIF1BO60333 1816 aa21.76■■□□□ 1.07
USP11-207ENST00000478596 WAPLQ7Z5K2 1190 aa21.76■■□□□ 1.07
USP11-207ENST00000478596 ABCA3Q99758 1704 aa21.76■■□□□ 1.07
USP11-207ENST00000478596 BTG4Q9NY30 223 aa21.76■■□□□ 1.07
USP11-207ENST00000478596 SPON1Q9HCB6 807 aa21.75■■□□□ 1.07
USP11-207ENST00000478596 PPP1R1BQ9UD71 204 aaPredicted RBP21.75■■□□□ 1.07
USP11-207ENST00000478596 SPATA31A5Q5VU36 1347 aa21.75■■□□□ 1.07
USP11-207ENST00000478596 SPATA31A7Q8IWB4 1347 aa21.75■■□□□ 1.07
USP11-207ENST00000478596 FMN2Q9NZ56 1722 aa21.75■■□□□ 1.07
USP11-207ENST00000478596 ZNF784Q8NCA9 323 aaPredicted RBP21.74■■□□□ 1.07
USP11-207ENST00000478596 THSD7AQ9UPZ6 1657 aa21.74■■□□□ 1.07
USP11-207ENST00000478596 TRIM37O94972 964 aa21.73■■□□□ 1.07
USP11-207ENST00000478596 FAM196AQ6ZSG2 479 aa21.73■■□□□ 1.07
USP11-207ENST00000478596 PHF8Q9UPP1 1060 aa21.73■■□□□ 1.07
USP11-207ENST00000478596 SENP3-EIF4A1A0A087X0R7 540 aa21.72■■□□□ 1.07
USP11-207ENST00000478596 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
USP11-207ENST00000478596 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
USP11-207ENST00000478596 NBPF14Q5TI25 921 aa21.72■■□□□ 1.07
USP11-207ENST00000478596 ABCC11Q96J66 1382 aa21.72■■□□□ 1.07
USP11-207ENST00000478596 KCNQ2O43526 872 aa21.71■■□□□ 1.07
USP11-207ENST00000478596 APBA3O96018 575 aa21.71■■□□□ 1.07
USP11-207ENST00000478596 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
USP11-207ENST00000478596 LMOD2Q6P5Q4 547 aa21.7■■□□□ 1.06
USP11-207ENST00000478596 NRXN1Q9ULB1 1477 aa21.7■■□□□ 1.06
USP11-207ENST00000478596 STK26Q9P289 416 aa21.69■■□□□ 1.06
USP11-207ENST00000478596 RREB1Q92766 1687 aa21.69■■□□□ 1.06
USP11-207ENST00000478596 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
USP11-207ENST00000478596 UTRNP46939 3433 aa21.68■■□□□ 1.06
USP11-207ENST00000478596 COL14A1Q05707 1796 aaKnown RBP21.67■■□□□ 1.06
USP11-207ENST00000478596 C1QTNF8P60827 252 aa21.66■■□□□ 1.06
USP11-207ENST00000478596 PPLO60437 1756 aa21.66■■□□□ 1.06
USP11-207ENST00000478596 NUP188Q5SRE5 1749 aa21.65■■□□□ 1.06
USP11-207ENST00000478596 KNDC1Q76NI1 1749 aa21.63■■□□□ 1.05
USP11-207ENST00000478596 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms