RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 ABCC1P33527 1531 aa7.88□□□□□ -1.15
SH3D19-207ENST00000478503 PLEKHH1Q9ULM0 1364 aa7.88□□□□□ -1.15
SH3D19-207ENST00000478503 SHROOM2Q13796 1616 aa7.88□□□□□ -1.15
SH3D19-207ENST00000478503 SPRYD3Q8NCJ5 442 aa7.88□□□□□ -1.15
SH3D19-207ENST00000478503 RNF123Q5XPI4 1314 aa7.88□□□□□ -1.15
SH3D19-207ENST00000478503 CABP2Q9NPB3 220 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 FANCIQ9NVI1 1328 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 MAST1Q9Y2H9 1570 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 BCAR3O75815 825 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 CDCA8Q53HL2 280 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 BCL2L13Q9BXK5 485 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 NOS1P29475 1434 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 RGS3P49796 1198 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 BRPF1P55201 1214 aaPredicted RBP7.87□□□□□ -1.15
SH3D19-207ENST00000478503 MORC1Q86VD1 984 aa7.87□□□□□ -1.15
SH3D19-207ENST00000478503 UNC13BO14795 1591 aa7.86□□□□□ -1.15
SH3D19-207ENST00000478503 CHMP4BQ9H444 224 aaKnown RBP7.86□□□□□ -1.15
SH3D19-207ENST00000478503 POLR1AO95602 1720 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-207ENST00000478503 GOLGA2Q08379 1002 aa7.86□□□□□ -1.15
SH3D19-207ENST00000478503 TMCO4Q5TGY1 634 aa7.86□□□□□ -1.15
SH3D19-207ENST00000478503 FRAT1Q92837 279 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-207ENST00000478503 ZNF692Q9BU19 519 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-207ENST00000478503 IQGAP3Q86VI3 1631 aa7.86□□□□□ -1.15
SH3D19-207ENST00000478503 ANP32AP39687 249 aaKnown RBP7.86□□□□□ -1.15
SH3D19-207ENST00000478503 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-207ENST00000478503 CD109Q6YHK3 1445 aa7.85□□□□□ -1.15
SH3D19-207ENST00000478503 FBLN1P23142 703 aa7.85□□□□□ -1.15
SH3D19-207ENST00000478503 ZFYVE16Q7Z3T8 1539 aa7.85□□□□□ -1.15
SH3D19-207ENST00000478503 CLASP1Q7Z460 1538 aa7.85□□□□□ -1.15
SH3D19-207ENST00000478503 CENPJQ9HC77 1338 aaPredicted RBP7.85□□□□□ -1.15
SH3D19-207ENST00000478503 SCAF11Q99590 1463 aaKnown RBP7.85□□□□□ -1.15
SH3D19-207ENST00000478503 PRDM15P57071 1507 aaPredicted RBP7.85□□□□□ -1.15
SH3D19-207ENST00000478503 PDE3BQ13370 1112 aa7.85□□□□□ -1.15
SH3D19-207ENST00000478503 DUSP27Q5VZP5 1158 aa7.85□□□□□ -1.15
SH3D19-207ENST00000478503 ATP7AQ04656 1500 aa7.85□□□□□ -1.15
SH3D19-207ENST00000478503 E9PCH4 1651 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 SLC4A3P48751 1232 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 STAG3Q9UJ98 1225 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 NOP58Q9Y2X3 529 aaKnown RBP7.84□□□□□ -1.15
SH3D19-207ENST00000478503 LAS1LQ9Y4W2 734 aaKnown RBP7.84□□□□□ -1.15
SH3D19-207ENST00000478503 PLXNC1O60486 1568 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 SRPK2P78362 688 aaKnown RBP7.84□□□□□ -1.15
SH3D19-207ENST00000478503 MINK1Q8N4C8 1332 aaPredicted RBP7.84□□□□□ -1.15
SH3D19-207ENST00000478503 PDE4AP27815 886 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 CANXP27824 592 aaKnown RBP7.84□□□□□ -1.15
SH3D19-207ENST00000478503 IDI1Q13907 227 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 FOXD4L1Q9NU39 408 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 CLTCL1P53675 1640 aa7.84□□□□□ -1.15
SH3D19-207ENST00000478503 UHRF1BP1LA0JNW5 1464 aa7.83□□□□□ -1.16
SH3D19-207ENST00000478503 CLUAP1Q96AJ1 413 aa7.83□□□□□ -1.16
SH3D19-207ENST00000478503 MTHFSP49914 203 aa7.83□□□□□ -1.16
SH3D19-207ENST00000478503 GGNBP2Q9H3C7 697 aa7.83□□□□□ -1.16
SH3D19-207ENST00000478503 EIF3AQ14152 1382 aaKnown RBP7.83□□□□□ -1.16
SH3D19-207ENST00000478503 U2SURPO15042 1029 aaKnown RBP7.82□□□□□ -1.16
SH3D19-207ENST00000478503 ZBTB47Q9UFB7 747 aaPredicted RBP7.82□□□□□ -1.16
SH3D19-207ENST00000478503 RTEL1-TNFRSF6BF6WH68 1400 aa7.82□□□□□ -1.16
SH3D19-207ENST00000478503 PANK1Q8TE04 598 aa7.82□□□□□ -1.16
SH3D19-207ENST00000478503 TNNQ9UQP3 1299 aa7.82□□□□□ -1.16
SH3D19-207ENST00000478503 PTPRTO14522 1441 aa7.82□□□□□ -1.16
SH3D19-207ENST00000478503 PRDM16Q9HAZ2 1276 aa7.82□□□□□ -1.16
SH3D19-207ENST00000478503 U2AF1L5P0DN76 240 aaPredicted RBP7.81□□□□□ -1.16
SH3D19-207ENST00000478503 U2AF1Q01081 240 aaKnown RBP eCLIP7.81□□□□□ -1.16
SH3D19-207ENST00000478503 COG6Q9Y2V7 657 aa7.81□□□□□ -1.16
SH3D19-207ENST00000478503 SLFN5Q08AF3 891 aa7.81□□□□□ -1.16
SH3D19-207ENST00000478503 FAM69CQ0P6D2 419 aa7.81□□□□□ -1.16
SH3D19-207ENST00000478503 NPATQ14207 1427 aa7.81□□□□□ -1.16
SH3D19-207ENST00000478503 NSD3Q9BZ95 1437 aa7.81□□□□□ -1.16
SH3D19-207ENST00000478503 CCDC27Q2M243 656 aa7.81□□□□□ -1.16
SH3D19-207ENST00000478503 GZF1Q9H116 711 aaPredicted RBP7.81□□□□□ -1.16
SH3D19-207ENST00000478503 POGKQ9P215 609 aa7.81□□□□□ -1.16
SH3D19-207ENST00000478503 TRPM2O94759 1503 aa7.8□□□□□ -1.16
SH3D19-207ENST00000478503 TCP11L2Q8N4U5 519 aa7.8□□□□□ -1.16
SH3D19-207ENST00000478503 IPO9Q96P70 1041 aaKnown RBP7.8□□□□□ -1.16
SH3D19-207ENST00000478503 C14orf93Q9H972 538 aaKnown RBP7.8□□□□□ -1.16
SH3D19-207ENST00000478503 MADDQ8WXG6 1647 aa7.8□□□□□ -1.16
SH3D19-207ENST00000478503 E9PSI1 815 aa7.8□□□□□ -1.16
SH3D19-207ENST00000478503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.8□□□□□ -1.16
SH3D19-207ENST00000478503 PPP1R1BQ9UD71 204 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-207ENST00000478503 ERVK-7P63135 1459 aa7.8□□□□□ -1.16
SH3D19-207ENST00000478503 NUTM2FA1L443 756 aa7.79□□□□□ -1.16
SH3D19-207ENST00000478503 BLMP54132 1417 aaPredicted RBP7.79□□□□□ -1.16
SH3D19-207ENST00000478503 MFAP1P55081 439 aaKnown RBP7.79□□□□□ -1.16
SH3D19-207ENST00000478503 ANAPC15P60006 121 aa7.79□□□□□ -1.16
SH3D19-207ENST00000478503 PPP4R3CPQ6ZMV5 832 aa7.79□□□□□ -1.16
SH3D19-207ENST00000478503 PRAM1Q96QH2 718 aa7.79□□□□□ -1.16
SH3D19-207ENST00000478503 EIF2AK4Q9P2K8 1649 aaKnown RBP7.79□□□□□ -1.16
SH3D19-207ENST00000478503 ASXL1Q8IXJ9 1541 aa7.78□□□□□ -1.16
SH3D19-207ENST00000478503 WAPLQ7Z5K2 1190 aa7.78□□□□□ -1.16
SH3D19-207ENST00000478503 SECISBP2LQ93073 1101 aaKnown RBP7.78□□□□□ -1.16
SH3D19-207ENST00000478503 TSR2Q969E8 191 aaKnown RBP7.78□□□□□ -1.16
SH3D19-207ENST00000478503 YEATS2Q9ULM3 1422 aa7.78□□□□□ -1.16
SH3D19-207ENST00000478503 TCERG1O14776 1098 aaKnown RBP7.78□□□□□ -1.16
SH3D19-207ENST00000478503 VGFO15240 615 aaPredicted RBP7.78□□□□□ -1.16
SH3D19-207ENST00000478503 BBXQ8WY36 941 aaPredicted RBP7.78□□□□□ -1.16
SH3D19-207ENST00000478503 BACH2Q9BYV9 841 aa7.78□□□□□ -1.16
SH3D19-207ENST00000478503 ZNF518AQ6AHZ1 1483 aa7.78□□□□□ -1.16
SH3D19-207ENST00000478503 GPATCH11Q8N954 259 aa7.77□□□□□ -1.17
SH3D19-207ENST00000478503 PTMAP06454 111 aaKnown RBP7.77□□□□□ -1.17
SH3D19-207ENST00000478503 ZNF521Q96K83 1311 aa7.77□□□□□ -1.17
SH3D19-207ENST00000478503 IGHDP01880 384 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms