RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 ABCC11Q96J66 1382 aa17.14■□□□□ 0.33
SKI-202ENST00000478223 C1orf167Q5SNV9 1468 aa17.13■□□□□ 0.33
SKI-202ENST00000478223 DCAF11Q8TEB1 546 aa17.13■□□□□ 0.33
SKI-202ENST00000478223 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
SKI-202ENST00000478223 USP32Q8NFA0 1604 aa17.12■□□□□ 0.33
SKI-202ENST00000478223 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
SKI-202ENST00000478223 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
SKI-202ENST00000478223 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
SKI-202ENST00000478223 LRP6O75581 1613 aa17.09■□□□□ 0.33
SKI-202ENST00000478223 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.32
SKI-202ENST00000478223 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
SKI-202ENST00000478223 JCADQ9P266 1359 aa17.07■□□□□ 0.32
SKI-202ENST00000478223 ORAI2Q96SN7 254 aa17.06■□□□□ 0.32
SKI-202ENST00000478223 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
SKI-202ENST00000478223 MARF1Q9Y4F3 1742 aaKnown RBP17.06■□□□□ 0.32
SKI-202ENST00000478223 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
SKI-202ENST00000478223 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
SKI-202ENST00000478223 NUTM2FA1L443 756 aa17.03■□□□□ 0.32
SKI-202ENST00000478223 SAFB2Q14151 953 aaKnown RBP eCLIP17.03■□□□□ 0.32
SKI-202ENST00000478223 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
SKI-202ENST00000478223 QRICH2Q9H0J4 1663 aa17.03■□□□□ 0.32
SKI-202ENST00000478223 ITSN1Q15811 1721 aa17.02■□□□□ 0.32
SKI-202ENST00000478223 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
SKI-202ENST00000478223 RGS17Q9UGC6 210 aaPredicted RBP17.02■□□□□ 0.32
SKI-202ENST00000478223 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
SKI-202ENST00000478223 PXDNQ92626 1479 aa17.01■□□□□ 0.31
SKI-202ENST00000478223 STAC3Q96MF2 364 aa17■□□□□ 0.31
SKI-202ENST00000478223 ABCA3Q99758 1704 aa17■□□□□ 0.31
SKI-202ENST00000478223 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
SKI-202ENST00000478223 TOPAZ1Q8N9V7 1692 aa16.99■□□□□ 0.31
SKI-202ENST00000478223 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
SKI-202ENST00000478223 ESCO1Q5FWF5 840 aa16.98■□□□□ 0.31
SKI-202ENST00000478223 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
SKI-202ENST00000478223 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
SKI-202ENST00000478223 SOS2Q07890 1332 aaPredicted RBP16.97■□□□□ 0.31
SKI-202ENST00000478223 NEUROD1Q13562 356 aa16.97■□□□□ 0.31
SKI-202ENST00000478223 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
SKI-202ENST00000478223 POGKQ9P215 609 aa16.96■□□□□ 0.31
SKI-202ENST00000478223 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.3
SKI-202ENST00000478223 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.3
SKI-202ENST00000478223 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
SKI-202ENST00000478223 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
SKI-202ENST00000478223 XPCQ01831 940 aaPredicted RBP16.94■□□□□ 0.3
SKI-202ENST00000478223 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
SKI-202ENST00000478223 LRRC59Q96AG4 307 aaKnown RBP16.93■□□□□ 0.3
SKI-202ENST00000478223 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
SKI-202ENST00000478223 NUTM2BA6NNL0 878 aaPredicted RBP16.92■□□□□ 0.3
SKI-202ENST00000478223 NUTM2EB1AL46 878 aaPredicted RBP16.92■□□□□ 0.3
SKI-202ENST00000478223 FOXO3O43524 673 aa16.92■□□□□ 0.3
SKI-202ENST00000478223 POTEAQ6S8J7 498 aa16.92■□□□□ 0.3
SKI-202ENST00000478223 NUTM2AQ8IVF1 878 aaPredicted RBP16.92■□□□□ 0.3
SKI-202ENST00000478223 PRR36Q9H6K5 1346 aa16.92■□□□□ 0.3
SKI-202ENST00000478223 ANKARQ7Z5J8 1434 aa16.91■□□□□ 0.3
SKI-202ENST00000478223 ATP7BP35670 1465 aa16.91■□□□□ 0.3
SKI-202ENST00000478223 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
SKI-202ENST00000478223 MEX3CQ5U5Q3 659 aaKnown RBP16.88■□□□□ 0.29
SKI-202ENST00000478223 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
SKI-202ENST00000478223 WASLO00401 505 aaPredicted RBP16.87■□□□□ 0.29
SKI-202ENST00000478223 SOCS7O14512 581 aa16.87■□□□□ 0.29
SKI-202ENST00000478223 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
SKI-202ENST00000478223 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
SKI-202ENST00000478223 PMFBP1Q8TBY8 1022 aa16.86■□□□□ 0.29
SKI-202ENST00000478223 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.84■□□□□ 0.29
SKI-202ENST00000478223 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
SKI-202ENST00000478223 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
SKI-202ENST00000478223 TNS3Q68CZ2 1445 aa16.84■□□□□ 0.29
SKI-202ENST00000478223 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
SKI-202ENST00000478223 SPATA31A3Q5VYP0 1347 aa16.83■□□□□ 0.28
SKI-202ENST00000478223 PHRF1Q9P1Y6 1649 aaKnown RBP16.83■□□□□ 0.28
SKI-202ENST00000478223 RALGAPBQ86X10 1494 aa16.82■□□□□ 0.28
SKI-202ENST00000478223 ROCK2O75116 1388 aaKnown RBP16.82■□□□□ 0.28
SKI-202ENST00000478223 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
SKI-202ENST00000478223 AFF2P51816 1311 aa16.82■□□□□ 0.28
SKI-202ENST00000478223 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
SKI-202ENST00000478223 C8orf37Q96NL8 207 aa16.82■□□□□ 0.28
SKI-202ENST00000478223 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
SKI-202ENST00000478223 CDK19Q9BWU1 502 aa16.81■□□□□ 0.28
SKI-202ENST00000478223 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
SKI-202ENST00000478223 NRAPQ86VF7 1730 aa16.8■□□□□ 0.28
SKI-202ENST00000478223 NWD2Q9ULI1 1742 aa16.8■□□□□ 0.28
SKI-202ENST00000478223 NUDT16Q96DE0 195 aaKnown RBP16.8■□□□□ 0.28
SKI-202ENST00000478223 SBNO1A3KN83 1393 aa16.79■□□□□ 0.28
SKI-202ENST00000478223 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
SKI-202ENST00000478223 PSME1Q06323 249 aa16.77■□□□□ 0.28
SKI-202ENST00000478223 ZNF772Q68DY9 489 aaPredicted RBP16.77■□□□□ 0.28
SKI-202ENST00000478223 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.27
SKI-202ENST00000478223 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
SKI-202ENST00000478223 CABLES1Q8TDN4 633 aa16.76■□□□□ 0.27
SKI-202ENST00000478223 MON2Q7Z3U7 1717 aa16.76■□□□□ 0.27
SKI-202ENST00000478223 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
SKI-202ENST00000478223 PPIP5K1Q6PFW1 1433 aa16.75■□□□□ 0.27
SKI-202ENST00000478223 NRKQ7Z2Y5 1582 aa16.75■□□□□ 0.27
SKI-202ENST00000478223 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
SKI-202ENST00000478223 NGDNQ8NEJ9 315 aaKnown RBP16.74■□□□□ 0.27
SKI-202ENST00000478223 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
SKI-202ENST00000478223 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
SKI-202ENST00000478223 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
SKI-202ENST00000478223 BCL9LQ86UU0 1499 aa16.73■□□□□ 0.27
SKI-202ENST00000478223 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
SKI-202ENST00000478223 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms