RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 RNF40O75150 1001 aa7.5□□□□□ -1.21
NPHP3-207ENST00000476742 Q8N3U1 123 aa7.5□□□□□ -1.21
NPHP3-207ENST00000476742 MAP2K5Q13163 448 aa7.49□□□□□ -1.21
NPHP3-207ENST00000476742 BARGINQ6ZT62 677 aa7.49□□□□□ -1.21
NPHP3-207ENST00000476742 TTC13Q8NBP0 860 aa7.49□□□□□ -1.21
NPHP3-207ENST00000476742 SMAPO00193 183 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 OATP04181 439 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 VEGFBP49765 207 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 PNMA3Q9UL41 463 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-207ENST00000476742 FECHP22830 423 aa7.47□□□□□ -1.21
NPHP3-207ENST00000476742 RBM46Q8TBY0 533 aaKnown RBP7.47□□□□□ -1.21
NPHP3-207ENST00000476742 TATDN2Q93075 761 aa7.47□□□□□ -1.21
NPHP3-207ENST00000476742 FAM198AQ9UFP1 575 aa7.47□□□□□ -1.21
NPHP3-207ENST00000476742 IRF6O14896 467 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 TLL1O43897 1013 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 HDGFP51858 240 aaKnown RBP7.45□□□□□ -1.22
NPHP3-207ENST00000476742 PCDHB3Q9Y5E6 796 aa7.44□□□□□ -1.22
NPHP3-207ENST00000476742 FAM161AQ3B820 660 aa7.43□□□□□ -1.22
NPHP3-207ENST00000476742 CCDC102AQ96A19 550 aa7.43□□□□□ -1.22
NPHP3-207ENST00000476742 TTC24A2A3L6 582 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-207ENST00000476742 SMPD1P17405 629 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 BLOC1S3Q6QNY0 202 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 AK7Q96M32 723 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 EYA1Q99502 592 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 PRR14Q9BWN1 585 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
NPHP3-207ENST00000476742 DNAJB2P25686 324 aa7.41□□□□□ -1.22
NPHP3-207ENST00000476742 RPIAP49247 311 aa7.41□□□□□ -1.22
NPHP3-207ENST00000476742 METTL3Q86U44 580 aaKnown RBP7.41□□□□□ -1.22
NPHP3-207ENST00000476742 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
NPHP3-207ENST00000476742 C3orf80F5H4A9 247 aa7.4□□□□□ -1.22
NPHP3-207ENST00000476742 VSIG8P0DPA2 414 aa7.4□□□□□ -1.22
NPHP3-207ENST00000476742 SLC4A3P48751 1232 aa7.4□□□□□ -1.22
NPHP3-207ENST00000476742 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
NPHP3-207ENST00000476742 SLF2Q8IX21 1173 aa7.37□□□□□ -1.23
NPHP3-207ENST00000476742 CD2BP2O95400 341 aaKnown RBP7.36□□□□□ -1.23
NPHP3-207ENST00000476742 ADH1BP00325 375 aa7.36□□□□□ -1.23
NPHP3-207ENST00000476742 PRKCSHP14314 528 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-207ENST00000476742 SWT1Q5T5J6 900 aaKnown RBP7.36□□□□□ -1.23
NPHP3-207ENST00000476742 TMEM134Q9H6X4 195 aa7.36□□□□□ -1.23
NPHP3-207ENST00000476742 TRIM66O15016 1216 aa7.35□□□□□ -1.23
NPHP3-207ENST00000476742 CLCN1P35523 988 aa7.35□□□□□ -1.23
NPHP3-207ENST00000476742 DAXXQ9UER7 740 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-207ENST00000476742 MDM2Q00987 491 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-207ENST00000476742 AMHR2Q16671 573 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 RSPH4AQ5TD94 716 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 SNIP1Q8TAD8 396 aaKnown RBP7.34□□□□□ -1.23
NPHP3-207ENST00000476742 PHOX2BQ99453 314 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 SLC6A16Q9GZN6 736 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 IRS1P35568 1242 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 TTLL12Q14166 644 aaPredicted RBP7.33□□□□□ -1.24
NPHP3-207ENST00000476742 KANK3Q6NY19 840 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 GPCPD1Q9NPB8 672 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 MSTNO14793 375 aa7.32□□□□□ -1.24
NPHP3-207ENST00000476742 PDE4DQ08499 809 aa7.32□□□□□ -1.24
NPHP3-207ENST00000476742 NLRP7Q8WX94 980 aa7.32□□□□□ -1.24
NPHP3-207ENST00000476742 DDX11L8A8MPP1 907 aa7.3□□□□□ -1.24
NPHP3-207ENST00000476742 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
NPHP3-207ENST00000476742 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
NPHP3-207ENST00000476742 RDH13Q8NBN7 331 aa7.29□□□□□ -1.24
NPHP3-207ENST00000476742 HPS1Q92902 700 aa7.29□□□□□ -1.24
NPHP3-207ENST00000476742 GIGYF2Q6Y7W6 1299 aaKnown RBP7.28□□□□□ -1.24
NPHP3-207ENST00000476742 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
NPHP3-207ENST00000476742 J3QL48 77 aa7.27□□□□□ -1.25
NPHP3-207ENST00000476742 K7ELQ4 463 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-207ENST00000476742 KMT5BQ4FZB7 885 aa7.27□□□□□ -1.25
NPHP3-207ENST00000476742 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-207ENST00000476742 NEUROD2Q15784 382 aa7.26□□□□□ -1.25
NPHP3-207ENST00000476742 SPOCK3Q9BQ16 436 aa7.26□□□□□ -1.25
NPHP3-207ENST00000476742 REPIN1Q9BWE0 567 aaKnown RBP7.26□□□□□ -1.25
NPHP3-207ENST00000476742 FAM217BQ9NTX9 383 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-207ENST00000476742 WNT7AO00755 349 aa7.25□□□□□ -1.25
NPHP3-207ENST00000476742 SLC10A3P09131 477 aa7.25□□□□□ -1.25
NPHP3-207ENST00000476742 CFHP08603 1231 aa7.24□□□□□ -1.25
NPHP3-207ENST00000476742 CD46P15529 392 aa7.24□□□□□ -1.25
NPHP3-207ENST00000476742 KDM4CQ9H3R0 1056 aa7.23□□□□□ -1.25
NPHP3-207ENST00000476742 GPBP1L1Q9HC44 474 aaPredicted RBP7.23□□□□□ -1.25
NPHP3-207ENST00000476742 GCGRP47871 477 aa7.22□□□□□ -1.25
NPHP3-207ENST00000476742 TRIM46Q7Z4K8 759 aa7.22□□□□□ -1.25
NPHP3-207ENST00000476742 MS4A1P11836 297 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 BRPF1P55201 1214 aaPredicted RBP7.21□□□□□ -1.26
NPHP3-207ENST00000476742 DIXDC1Q155Q3 683 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 PLA2G4EQ3MJ16 856 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 GRIPAP1Q4V328 841 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 NUTM1Q86Y26 1132 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 BEGAINQ9BUH8 593 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 ACTN4O43707 911 aaKnown RBP7.2□□□□□ -1.26
NPHP3-207ENST00000476742 DDRGK1Q96HY6 314 aa7.2□□□□□ -1.26
NPHP3-207ENST00000476742 KDM4AO75164 1064 aa7.19□□□□□ -1.26
NPHP3-207ENST00000476742 USP46P62068 366 aa7.19□□□□□ -1.26
NPHP3-207ENST00000476742 NR1I2O75469 434 aa7.18□□□□□ -1.26
NPHP3-207ENST00000476742 PROCP04070 461 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms