RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 NUTM2BA6NNL0 878 aaPredicted RBP15.85■□□□□ 0.13
SEC13-214ENST00000476597 NUTM2EB1AL46 878 aaPredicted RBP15.85■□□□□ 0.13
SEC13-214ENST00000476597 NUTM2AQ8IVF1 878 aaPredicted RBP15.85■□□□□ 0.13
SEC13-214ENST00000476597 SOS2Q07890 1332 aaPredicted RBP15.85■□□□□ 0.13
SEC13-214ENST00000476597 PLEKHH1Q9ULM0 1364 aa15.85■□□□□ 0.13
SEC13-214ENST00000476597 ESCO1Q5FWF5 840 aa15.84■□□□□ 0.13
SEC13-214ENST00000476597 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
SEC13-214ENST00000476597 MYOM2P54296 1465 aa15.84■□□□□ 0.13
SEC13-214ENST00000476597 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
SEC13-214ENST00000476597 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
SEC13-214ENST00000476597 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
SEC13-214ENST00000476597 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
SEC13-214ENST00000476597 KDM2AQ9Y2K7 1162 aa15.82■□□□□ 0.12
SEC13-214ENST00000476597 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
SEC13-214ENST00000476597 SHPRHQ149N8 1683 aa15.81■□□□□ 0.12
SEC13-214ENST00000476597 NHSL1Q5SYE7 1610 aa15.81■□□□□ 0.12
SEC13-214ENST00000476597 NUTM2FA1L443 756 aa15.8■□□□□ 0.12
SEC13-214ENST00000476597 FOXO3O43524 673 aa15.8■□□□□ 0.12
SEC13-214ENST00000476597 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
SEC13-214ENST00000476597 PRAM1Q96QH2 718 aa15.79■□□□□ 0.12
SEC13-214ENST00000476597 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
SEC13-214ENST00000476597 LAMC1P11047 1609 aa15.76■□□□□ 0.11
SEC13-214ENST00000476597 AFF2P51816 1311 aa15.76■□□□□ 0.11
SEC13-214ENST00000476597 POGKQ9P215 609 aa15.76■□□□□ 0.11
SEC13-214ENST00000476597 SAFB2Q14151 953 aaKnown RBP eCLIP15.75■□□□□ 0.11
SEC13-214ENST00000476597 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
SEC13-214ENST00000476597 TRAK1Q9UPV9 953 aa15.75■□□□□ 0.11
SEC13-214ENST00000476597 ADAMTS2O95450 1211 aa15.74■□□□□ 0.11
SEC13-214ENST00000476597 RXRBP28702 533 aa15.74■□□□□ 0.11
SEC13-214ENST00000476597 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
SEC13-214ENST00000476597 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
SEC13-214ENST00000476597 NGLY1Q96IV0 654 aa15.73■□□□□ 0.11
SEC13-214ENST00000476597 QTRT2Q9H974 415 aaKnown RBP15.73■□□□□ 0.11
SEC13-214ENST00000476597 ADGRB1O14514 1584 aa15.73■□□□□ 0.11
SEC13-214ENST00000476597 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
SEC13-214ENST00000476597 PHF8Q9UPP1 1060 aa15.72■□□□□ 0.11
SEC13-214ENST00000476597 DLC1Q96QB1 1528 aa15.72■□□□□ 0.11
SEC13-214ENST00000476597 PXDNQ92626 1479 aa15.71■□□□□ 0.11
SEC13-214ENST00000476597 FNBP4Q8N3X1 1017 aaPredicted RBP15.7■□□□□ 0.1
SEC13-214ENST00000476597 SPATA31A3Q5VYP0 1347 aa15.69■□□□□ 0.1
SEC13-214ENST00000476597 RBM6P78332 1123 aaKnown RBP15.68■□□□□ 0.1
SEC13-214ENST00000476597 PSME1Q06323 249 aa15.68■□□□□ 0.1
SEC13-214ENST00000476597 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
SEC13-214ENST00000476597 MINK1Q8N4C8 1332 aaPredicted RBP15.68■□□□□ 0.1
SEC13-214ENST00000476597 WASLO00401 505 aaPredicted RBP15.67■□□□□ 0.1
SEC13-214ENST00000476597 USP21Q9UK80 565 aa15.67■□□□□ 0.1
SEC13-214ENST00000476597 FMN2Q9NZ56 1722 aa15.66■□□□□ 0.1
SEC13-214ENST00000476597 PMFBP1Q8TBY8 1022 aa15.66■□□□□ 0.1
SEC13-214ENST00000476597 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
SEC13-214ENST00000476597 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
SEC13-214ENST00000476597 NBPF1Q3BBV0 1214 aa15.64■□□□□ 0.09
SEC13-214ENST00000476597 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
SEC13-214ENST00000476597 COL22A1Q8NFW1 1626 aaPredicted RBP15.64■□□□□ 0.09
SEC13-214ENST00000476597 PRR36Q9H6K5 1346 aa15.64■□□□□ 0.09
SEC13-214ENST00000476597 SBNO1A3KN83 1393 aa15.63■□□□□ 0.09
SEC13-214ENST00000476597 UPF1Q92900 1129 aaKnown RBP eCLIP15.63■□□□□ 0.09
SEC13-214ENST00000476597 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
SEC13-214ENST00000476597 SIN3AQ96ST3 1273 aa15.62■□□□□ 0.09
SEC13-214ENST00000476597 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
SEC13-214ENST00000476597 ADGRB2O60241 1585 aa15.61■□□□□ 0.09
SEC13-214ENST00000476597 KIF1AQ12756 1690 aa15.6■□□□□ 0.09
SEC13-214ENST00000476597 CABLES1Q8TDN4 633 aa15.6■□□□□ 0.09
SEC13-214ENST00000476597 NUDT16Q96DE0 195 aaKnown RBP15.6■□□□□ 0.09
SEC13-214ENST00000476597 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
SEC13-214ENST00000476597 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
SEC13-214ENST00000476597 LMOD2Q6P5Q4 547 aa15.59■□□□□ 0.09
SEC13-214ENST00000476597 CDK19Q9BWU1 502 aa15.59■□□□□ 0.09
SEC13-214ENST00000476597 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
SEC13-214ENST00000476597 ATRNO75882 1429 aa15.59■□□□□ 0.09
SEC13-214ENST00000476597 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
SEC13-214ENST00000476597 GPRASP1Q5JY77 1395 aa15.58■□□□□ 0.08
SEC13-214ENST00000476597 RGS12O14924 1447 aa15.58■□□□□ 0.08
SEC13-214ENST00000476597 TULP4Q9NRJ4 1543 aa15.58■□□□□ 0.08
SEC13-214ENST00000476597 USP32Q8NFA0 1604 aa15.57■□□□□ 0.08
SEC13-214ENST00000476597 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
SEC13-214ENST00000476597 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
SEC13-214ENST00000476597 UNC5CLQ8IV45 518 aa15.57■□□□□ 0.08
SEC13-214ENST00000476597 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
SEC13-214ENST00000476597 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
SEC13-214ENST00000476597 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
SEC13-214ENST00000476597 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
SEC13-214ENST00000476597 SLIT2O94813 1529 aa15.54■□□□□ 0.08
SEC13-214ENST00000476597 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
SEC13-214ENST00000476597 CENPJQ9HC77 1338 aaPredicted RBP15.53■□□□□ 0.08
SEC13-214ENST00000476597 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
SEC13-214ENST00000476597 ATP7BP35670 1465 aa15.52■□□□□ 0.08
SEC13-214ENST00000476597 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.08
SEC13-214ENST00000476597 PAK3O75914 559 aaPredicted RBP15.52■□□□□ 0.08
SEC13-214ENST00000476597 NBPF8Q3BBV2 869 aa15.52■□□□□ 0.08
SEC13-214ENST00000476597 ARHGEF28Q8N1W1 1705 aaKnown RBP15.51■□□□□ 0.07
SEC13-214ENST00000476597 ACEP12821 1306 aa15.5■□□□□ 0.07
SEC13-214ENST00000476597 VPS72Q15906 364 aa15.5■□□□□ 0.07
SEC13-214ENST00000476597 POLR3AO14802 1390 aaPredicted RBP15.49■□□□□ 0.07
SEC13-214ENST00000476597 SRPK2P78362 688 aaKnown RBP15.49■□□□□ 0.07
SEC13-214ENST00000476597 CABP2Q9NPB3 220 aa15.49■□□□□ 0.07
SEC13-214ENST00000476597 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
SEC13-214ENST00000476597 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
SEC13-214ENST00000476597 ATAD2Q6PL18 1390 aa15.48■□□□□ 0.07
SEC13-214ENST00000476597 RALGAPBQ86X10 1494 aa15.47■□□□□ 0.07
SEC13-214ENST00000476597 BTG4Q9NY30 223 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms