RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	FAM43A	Q8N2R8	423 aa		7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	IL27	Q8NEV9	243 aa		7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	CCDC191	Q8NCU4	936 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	SCAPER	Q9BY12	1400 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	EVC2	Q86UK5	1308 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	FRAT2	O75474	233 aa	Predicted RBP	7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	KIF3A	Q9Y496	699 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	VGF	O15240	615 aa	Predicted RBP	7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	TERF2IP	Q9NYB0	399 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ADGRL2	O95490	1459 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	MLEC	Q14165	292 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	PDE3A	Q14432	1141 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ELL2	O00472	640 aa	Predicted RBP	7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	TPM2	P07951	284 aa		7.5	□□□□□ -1.21
HNRNPU-208	ENST00000475997	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	GGNBP2	Q9H3C7	697 aa		7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	CABP2	Q9NPB3	220 aa		7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	FAM135A	Q9P2D6	1515 aa		7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	RDX	P35241	583 aa	Known RBP	7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ATP6V1D	Q9Y5K8	247 aa		7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	WWC1	Q8IX03	1113 aa		7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	DZIP1L	Q8IYY4	767 aa	Known RBP	7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	TSR1	Q2NL82	804 aa	Known RBP	7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	DIAPH3	Q9NSV4	1193 aa		7.49	□□□□□ -1.21
HNRNPU-208	ENST00000475997	CLSTN1	O94985	981 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	TPM1	P09493	284 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ARHGEF12	Q9NZN5	1544 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ADGRF5	Q8IZF2	1346 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	SOX12	O15370	315 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	CHMP4C	Q96CF2	233 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	KIF16B	Q96L93	1317 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	GOLGA6L19	H0YKK7	550 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ST18	O60284	1047 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	HSP90B2P	Q58FF3	399 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	TAOK2	Q9UL54	1235 aa		7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	DDX49	Q9Y6V7	483 aa	Known RBP	7.48	□□□□□ -1.21
HNRNPU-208	ENST00000475997	BRPF3	Q9ULD4	1205 aa		7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	LRRIQ1	Q96JM4	1722 aa		7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	APBB1	O00213	710 aa		7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	RIPK4	P57078	832 aa		7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	DCTN1	Q14203	1278 aa		7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	PDZRN3	Q9UPQ7	1066 aa		7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	TSR2	Q969E8	191 aa	Known RBP	7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	PLEKHH1	Q9ULM0	1364 aa		7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	PRKCSH	P14314	528 aa	Predicted RBP	7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	HSP90B1	P14625	803 aa	Known RBP	7.47	□□□□□ -1.21
HNRNPU-208	ENST00000475997	SYCP2	Q9BX26	1530 aa		7.46	□□□□□ -1.21
HNRNPU-208	ENST00000475997	EIF4G3	O43432	1585 aa	Known RBP	7.46	□□□□□ -1.21
HNRNPU-208	ENST00000475997	AK7	Q96M32	723 aa		7.46	□□□□□ -1.21
HNRNPU-208	ENST00000475997	CCAR2	Q8N163	923 aa	Known RBP	7.46	□□□□□ -1.21
HNRNPU-208	ENST00000475997	SHANK2	Q9UPX8	1470 aa		7.46	□□□□□ -1.22
HNRNPU-208	ENST00000475997	BECN2	A8MW95	431 aa		7.46	□□□□□ -1.22
HNRNPU-208	ENST00000475997	EXOSC9	Q06265	439 aa	Known RBP	7.46	□□□□□ -1.22
HNRNPU-208	ENST00000475997	TAF3	Q5VWG9	929 aa		7.46	□□□□□ -1.22
HNRNPU-208	ENST00000475997	CHMP4A	Q9BY43	222 aa		7.46	□□□□□ -1.22
HNRNPU-208	ENST00000475997		H0YHG0	523 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	IPO7	O95373	1038 aa	Known RBP	7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	IGHD	P01880	384 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	SPINK5	Q9NQ38	1064 aa	Predicted RBP	7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	FOXD4L1	Q9NU39	408 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	A2M	P01023	1474 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	PATL2	C9JE40	543 aa	Known RBP	7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	DIAPH1	O60610	1272 aa	Known RBP	7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	DDX19B	Q9UMR2	479 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	HMGN5	P82970	282 aa	Known RBP	7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	STK11IP	Q8N1F8	1099 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	USP8	P40818	1118 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ANKRD45	Q5TZF3	282 aa		7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	SCAF11	Q99590	1463 aa	Known RBP	7.45	□□□□□ -1.22
HNRNPU-208	ENST00000475997	LNPK	Q9C0E8	428 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	KDM5C	P41229	1560 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	RUFY1	Q96T51	708 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	NUP160	Q12769	1436 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	NKTR	P30414	1462 aa	Known RBP	7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	PLEKHG5	O94827	1062 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	RARS	P54136	660 aa	Known RBP	7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	WDR63	Q8IWG1	891 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	HDAC5	Q9UQL6	1122 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	NSD3	Q9BZ95	1437 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	BCORL1	Q5H9F3	1711 aa		7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.44	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ERCC4	Q92889	916 aa	Predicted RBP	7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	C22orf23	Q9BZE7	217 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	AAMP	Q13685	434 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	CARD14	Q9BXL6	1004 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	HMOX1	P09601	288 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	TRAPPC8	Q9Y2L5	1435 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	MBD5	Q9P267	1494 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	CEP170	Q5SW79	1584 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	NUTM2F	A1L443	756 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	RRP9	O43818	475 aa	Known RBP	7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	SF3A1	Q15459	793 aa	Known RBP	7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	MNS1	Q8NEH6	495 aa		7.43	□□□□□ -1.22
HNRNPU-208	ENST00000475997	GPRASP1	Q5JY77	1395 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	C8orf34	Q49A92	452 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	C14orf37	Q86TY3	774 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ABCC10	Q5T3U5	1492 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	MRE11	P49959	708 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms