RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 NUTM2BA6NNL0 878 aaPredicted RBP21.72■■□□□ 1.07
SNX13-207ENST00000475800 NUTM2EB1AL46 878 aaPredicted RBP21.72■■□□□ 1.07
SNX13-207ENST00000475800 BRINP3Q76B58 766 aa21.72■■□□□ 1.07
SNX13-207ENST00000475800 NUTM2AQ8IVF1 878 aaPredicted RBP21.72■■□□□ 1.07
SNX13-207ENST00000475800 ADGRB1O14514 1584 aa21.71■■□□□ 1.07
SNX13-207ENST00000475800 TMEM132EQ6IEE7 984 aa21.71■■□□□ 1.07
SNX13-207ENST00000475800 DDX17Q92841 729 aaKnown RBP21.69■■□□□ 1.06
SNX13-207ENST00000475800 LRP6O75581 1613 aa21.69■■□□□ 1.06
SNX13-207ENST00000475800 SIRT1Q96EB6 747 aa21.68■■□□□ 1.06
SNX13-207ENST00000475800 STK26Q9P289 416 aa21.68■■□□□ 1.06
SNX13-207ENST00000475800 TIMELESSQ9UNS1 1208 aa21.68■■□□□ 1.06
SNX13-207ENST00000475800 ROBO2Q9HCK4 1378 aa21.68■■□□□ 1.06
SNX13-207ENST00000475800 DLC1Q96QB1 1528 aa21.67■■□□□ 1.06
SNX13-207ENST00000475800 DCCP43146 1447 aa21.66■■□□□ 1.06
SNX13-207ENST00000475800 ADGRL3Q9HAR2 1447 aa21.66■■□□□ 1.06
SNX13-207ENST00000475800 AHDC1Q5TGY3 1603 aaPredicted RBP21.66■■□□□ 1.06
SNX13-207ENST00000475800 TRPM1Q7Z4N2 1603 aa21.65■■□□□ 1.06
SNX13-207ENST00000475800 NALCNQ8IZF0 1738 aa21.64■■□□□ 1.06
SNX13-207ENST00000475800 SPATA31A6Q5VVP1 1343 aa21.64■■□□□ 1.05
SNX13-207ENST00000475800 MST1RQ04912 1400 aa21.63■■□□□ 1.05
SNX13-207ENST00000475800 SHPRHQ149N8 1683 aa21.6■■□□□ 1.05
SNX13-207ENST00000475800 ARHGEF28Q8N1W1 1705 aaKnown RBP21.59■■□□□ 1.05
SNX13-207ENST00000475800 NBPF1Q3BBV0 1214 aa21.58■■□□□ 1.05
SNX13-207ENST00000475800 WAPLQ7Z5K2 1190 aa21.58■■□□□ 1.05
SNX13-207ENST00000475800 POGKQ9P215 609 aa21.58■■□□□ 1.05
SNX13-207ENST00000475800 TRAK1Q9UPV9 953 aa21.58■■□□□ 1.05
SNX13-207ENST00000475800 ROCK2O75116 1388 aaKnown RBP21.58■■□□□ 1.04
SNX13-207ENST00000475800 ZNF772Q68DY9 489 aaPredicted RBP21.57■■□□□ 1.04
SNX13-207ENST00000475800 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
SNX13-207ENST00000475800 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
SNX13-207ENST00000475800 PRAM1Q96QH2 718 aa21.56■■□□□ 1.04
SNX13-207ENST00000475800 RALGAPBQ86X10 1494 aa21.56■■□□□ 1.04
SNX13-207ENST00000475800 GPRASP1Q5JY77 1395 aa21.55■■□□□ 1.04
SNX13-207ENST00000475800 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
SNX13-207ENST00000475800 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
SNX13-207ENST00000475800 LRRC59Q96AG4 307 aaKnown RBP21.54■■□□□ 1.04
SNX13-207ENST00000475800 C8orf37Q96NL8 207 aa21.54■■□□□ 1.04
SNX13-207ENST00000475800 AFF2P51816 1311 aa21.54■■□□□ 1.04
SNX13-207ENST00000475800 ORAI2Q96SN7 254 aa21.53■■□□□ 1.04
SNX13-207ENST00000475800 ADAMTS2O95450 1211 aa21.52■■□□□ 1.04
SNX13-207ENST00000475800 ADGRB2O60241 1585 aa21.52■■□□□ 1.04
SNX13-207ENST00000475800 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.03
SNX13-207ENST00000475800 RXRBP28702 533 aa21.51■■□□□ 1.03
SNX13-207ENST00000475800 EIF3AQ14152 1382 aaKnown RBP21.5■■□□□ 1.03
SNX13-207ENST00000475800 NUTM2FA1L443 756 aa21.49■■□□□ 1.03
SNX13-207ENST00000475800 SAFB2Q14151 953 aaKnown RBP eCLIP21.49■■□□□ 1.03
SNX13-207ENST00000475800 FMN2Q9NZ56 1722 aa21.49■■□□□ 1.03
SNX13-207ENST00000475800 PNPLA6Q8IY17 1366 aa21.48■■□□□ 1.03
SNX13-207ENST00000475800 CARD11Q9BXL7 1154 aa21.48■■□□□ 1.03
SNX13-207ENST00000475800 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
SNX13-207ENST00000475800 QRICH2Q9H0J4 1663 aa21.45■■□□□ 1.02
SNX13-207ENST00000475800 XPCQ01831 940 aaPredicted RBP21.44■■□□□ 1.02
SNX13-207ENST00000475800 ESCO1Q5FWF5 840 aa21.44■■□□□ 1.02
SNX13-207ENST00000475800 NGLY1Q96IV0 654 aa21.44■■□□□ 1.02
SNX13-207ENST00000475800 MINK1Q8N4C8 1332 aaPredicted RBP21.44■■□□□ 1.02
SNX13-207ENST00000475800 UPF1Q92900 1129 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNX13-207ENST00000475800 QTRT2Q9H974 415 aaKnown RBP21.43■■□□□ 1.02
SNX13-207ENST00000475800 ANKARQ7Z5J8 1434 aa21.41■■□□□ 1.02
SNX13-207ENST00000475800 WASLO00401 505 aaPredicted RBP21.4■■□□□ 1.02
SNX13-207ENST00000475800 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
SNX13-207ENST00000475800 SOS2Q07890 1332 aaPredicted RBP21.39■■□□□ 1.01
SNX13-207ENST00000475800 TULP4Q9NRJ4 1543 aa21.39■■□□□ 1.01
SNX13-207ENST00000475800 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
SNX13-207ENST00000475800 KIF1AQ12756 1690 aa21.38■■□□□ 1.01
SNX13-207ENST00000475800 FOXO3O43524 673 aa21.38■■□□□ 1.01
SNX13-207ENST00000475800 SBNO2Q9Y2G9 1366 aa21.37■■□□□ 1.01
SNX13-207ENST00000475800 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
SNX13-207ENST00000475800 PLEKHG5O94827 1062 aa21.36■■□□□ 1.01
SNX13-207ENST00000475800 RBM6P78332 1123 aaKnown RBP21.35■■□□□ 1.01
SNX13-207ENST00000475800 USP21Q9UK80 565 aa21.35■■□□□ 1.01
SNX13-207ENST00000475800 RGS12O14924 1447 aa21.35■■□□□ 1.01
SNX13-207ENST00000475800 USP32Q8NFA0 1604 aa21.34■■□□□ 1.01
SNX13-207ENST00000475800 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
SNX13-207ENST00000475800 NPHP3Q7Z494 1330 aa21.33■■□□□ 1.01
SNX13-207ENST00000475800 EVC2Q86UK5 1308 aa21.33■■□□□ 1.01
SNX13-207ENST00000475800 CDK19Q9BWU1 502 aa21.33■■□□□ 1.01
SNX13-207ENST00000475800 USP47Q96K76 1375 aa21.32■■□□□ 1
SNX13-207ENST00000475800 ATP7BP35670 1465 aa21.31■■□□□ 1
SNX13-207ENST00000475800 PHF8Q9UPP1 1060 aa21.3■■□□□ 1
SNX13-207ENST00000475800 CDK12Q9NYV4 1490 aaPredicted RBP21.3■■□□□ 1
SNX13-207ENST00000475800 SRPK2P78362 688 aaKnown RBP21.29■■□□□ 1
SNX13-207ENST00000475800 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
SNX13-207ENST00000475800 PRR36Q9H6K5 1346 aa21.29■■□□□ 1
SNX13-207ENST00000475800 TOPAZ1Q8N9V7 1692 aa21.28■■□□□ 1
SNX13-207ENST00000475800 PXDNQ92626 1479 aa21.28■■□□□ 1
SNX13-207ENST00000475800 ST20-MTHFSA0A0A6YYL1 179 aa21.27■■□□□ 1
SNX13-207ENST00000475800 TRPC5Q9UL62 973 aaPredicted RBP21.27■■□□□ 1
SNX13-207ENST00000475800 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
SNX13-207ENST00000475800 FNBP4Q8N3X1 1017 aaPredicted RBP21.24■□□□□ 0.99
SNX13-207ENST00000475800 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
SNX13-207ENST00000475800 COL22A1Q8NFW1 1626 aaPredicted RBP21.23■□□□□ 0.99
SNX13-207ENST00000475800 LMOD2Q6P5Q4 547 aa21.23■□□□□ 0.99
SNX13-207ENST00000475800 KRT28Q7Z3Y7 464 aa21.23■□□□□ 0.99
SNX13-207ENST00000475800 PUS7Q96PZ0 661 aaKnown RBP21.23■□□□□ 0.99
SNX13-207ENST00000475800 TESK2Q96S53 571 aa21.23■□□□□ 0.99
SNX13-207ENST00000475800 CABP2Q9NPB3 220 aa21.23■□□□□ 0.99
SNX13-207ENST00000475800 HAP1P54257 671 aaPredicted RBP21.22■□□□□ 0.99
SNX13-207ENST00000475800 PSME1Q06323 249 aa21.22■□□□□ 0.99
SNX13-207ENST00000475800 PMFBP1Q8TBY8 1022 aa21.22■□□□□ 0.99
SNX13-207ENST00000475800 PLEKHG3A1L390 1219 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms