RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 ADGRB1O14514 1584 aa16.72■□□□□ 0.27
BRD9-203ENST00000475706 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
BRD9-203ENST00000475706 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
BRD9-203ENST00000475706 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
BRD9-203ENST00000475706 C1orf167Q5SNV9 1468 aa16.72■□□□□ 0.27
BRD9-203ENST00000475706 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
BRD9-203ENST00000475706 COL16A1Q07092 1604 aaPredicted RBP16.71■□□□□ 0.27
BRD9-203ENST00000475706 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
BRD9-203ENST00000475706 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
BRD9-203ENST00000475706 CDC42BPGQ6DT37 1551 aa16.71■□□□□ 0.27
BRD9-203ENST00000475706 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
BRD9-203ENST00000475706 ORAI2Q96SN7 254 aa16.7■□□□□ 0.26
BRD9-203ENST00000475706 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
BRD9-203ENST00000475706 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
BRD9-203ENST00000475706 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
BRD9-203ENST00000475706 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
BRD9-203ENST00000475706 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
BRD9-203ENST00000475706 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
BRD9-203ENST00000475706 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
BRD9-203ENST00000475706 JCADQ9P266 1359 aa16.67■□□□□ 0.26
BRD9-203ENST00000475706 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
BRD9-203ENST00000475706 MINK1Q8N4C8 1332 aaPredicted RBP16.66■□□□□ 0.26
BRD9-203ENST00000475706 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
BRD9-203ENST00000475706 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
BRD9-203ENST00000475706 SHPRHQ149N8 1683 aa16.63■□□□□ 0.25
BRD9-203ENST00000475706 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
BRD9-203ENST00000475706 TRPM1Q7Z4N2 1603 aa16.62■□□□□ 0.25
BRD9-203ENST00000475706 NUTM2BA6NNL0 878 aaPredicted RBP16.6■□□□□ 0.25
BRD9-203ENST00000475706 NUTM2EB1AL46 878 aaPredicted RBP16.6■□□□□ 0.25
BRD9-203ENST00000475706 FOXO3O43524 673 aa16.6■□□□□ 0.25
BRD9-203ENST00000475706 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
BRD9-203ENST00000475706 NUTM2AQ8IVF1 878 aaPredicted RBP16.6■□□□□ 0.25
BRD9-203ENST00000475706 ADGRB2O60241 1585 aa16.6■□□□□ 0.25
BRD9-203ENST00000475706 KIF1AQ12756 1690 aa16.59■□□□□ 0.25
BRD9-203ENST00000475706 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
BRD9-203ENST00000475706 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
BRD9-203ENST00000475706 NPHP3Q7Z494 1330 aa16.59■□□□□ 0.25
BRD9-203ENST00000475706 WASLO00401 505 aaPredicted RBP16.58■□□□□ 0.24
BRD9-203ENST00000475706 NBPF8Q3BBV2 869 aa16.58■□□□□ 0.24
BRD9-203ENST00000475706 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.24
BRD9-203ENST00000475706 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
BRD9-203ENST00000475706 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.24
BRD9-203ENST00000475706 USP32Q8NFA0 1604 aa16.57■□□□□ 0.24
BRD9-203ENST00000475706 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
BRD9-203ENST00000475706 PMFBP1Q8TBY8 1022 aa16.56■□□□□ 0.24
BRD9-203ENST00000475706 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
BRD9-203ENST00000475706 PNPLA6Q8IY17 1366 aa16.55■□□□□ 0.24
BRD9-203ENST00000475706 CENPJQ9HC77 1338 aaPredicted RBP16.55■□□□□ 0.24
BRD9-203ENST00000475706 QRICH2Q9H0J4 1663 aa16.55■□□□□ 0.24
BRD9-203ENST00000475706 LRP6O75581 1613 aa16.55■□□□□ 0.24
BRD9-203ENST00000475706 ANKARQ7Z5J8 1434 aa16.54■□□□□ 0.24
BRD9-203ENST00000475706 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
BRD9-203ENST00000475706 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
BRD9-203ENST00000475706 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
BRD9-203ENST00000475706 PRR36Q9H6K5 1346 aa16.53■□□□□ 0.24
BRD9-203ENST00000475706 TULP4Q9NRJ4 1543 aa16.53■□□□□ 0.24
BRD9-203ENST00000475706 PXDNQ92626 1479 aa16.53■□□□□ 0.24
BRD9-203ENST00000475706 PSME1Q06323 249 aa16.52■□□□□ 0.24
BRD9-203ENST00000475706 NUDT16Q96DE0 195 aaKnown RBP16.52■□□□□ 0.24
BRD9-203ENST00000475706 RGS17Q9UGC6 210 aaPredicted RBP16.51■□□□□ 0.23
BRD9-203ENST00000475706 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
BRD9-203ENST00000475706 NGDNQ8NEJ9 315 aaKnown RBP16.5■□□□□ 0.23
BRD9-203ENST00000475706 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
BRD9-203ENST00000475706 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
BRD9-203ENST00000475706 ADAMTS2O95450 1211 aa16.49■□□□□ 0.23
BRD9-203ENST00000475706 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
BRD9-203ENST00000475706 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
BRD9-203ENST00000475706 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
BRD9-203ENST00000475706 SPATA31A3Q5VYP0 1347 aa16.47■□□□□ 0.23
BRD9-203ENST00000475706 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
BRD9-203ENST00000475706 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
BRD9-203ENST00000475706 GPRASP1Q5JY77 1395 aa16.47■□□□□ 0.23
BRD9-203ENST00000475706 ATP7BP35670 1465 aa16.47■□□□□ 0.23
BRD9-203ENST00000475706 RALGAPBQ86X10 1494 aa16.47■□□□□ 0.23
BRD9-203ENST00000475706 POTEAQ6S8J7 498 aa16.46■□□□□ 0.23
BRD9-203ENST00000475706 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
BRD9-203ENST00000475706 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
BRD9-203ENST00000475706 CCDC61Q9Y6R9 512 aa16.45■□□□□ 0.22
BRD9-203ENST00000475706 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
BRD9-203ENST00000475706 TOPAZ1Q8N9V7 1692 aa16.44■□□□□ 0.22
BRD9-203ENST00000475706 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
BRD9-203ENST00000475706 HAP1P54257 671 aaPredicted RBP16.44■□□□□ 0.22
BRD9-203ENST00000475706 ZNF772Q68DY9 489 aaPredicted RBP16.44■□□□□ 0.22
BRD9-203ENST00000475706 NGLY1Q96IV0 654 aa16.44■□□□□ 0.22
BRD9-203ENST00000475706 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
BRD9-203ENST00000475706 AFF2P51816 1311 aa16.44■□□□□ 0.22
BRD9-203ENST00000475706 EVC2Q86UK5 1308 aa16.44■□□□□ 0.22
BRD9-203ENST00000475706 SBNO1A3KN83 1393 aa16.43■□□□□ 0.22
BRD9-203ENST00000475706 ACEP12821 1306 aa16.42■□□□□ 0.22
BRD9-203ENST00000475706 CABLES1Q8TDN4 633 aa16.41■□□□□ 0.22
BRD9-203ENST00000475706 ALS2Q96Q42 1657 aa16.4■□□□□ 0.22
BRD9-203ENST00000475706 ARHGEF10O15013 1369 aa16.4■□□□□ 0.22
BRD9-203ENST00000475706 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
BRD9-203ENST00000475706 PLEKHG3A1L390 1219 aa16.4■□□□□ 0.22
BRD9-203ENST00000475706 SOCS7O14512 581 aa16.39■□□□□ 0.21
BRD9-203ENST00000475706 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
BRD9-203ENST00000475706 CABP1Q9NZU7 370 aa16.38■□□□□ 0.21
BRD9-203ENST00000475706 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
BRD9-203ENST00000475706 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
BRD9-203ENST00000475706 USP21Q9UK80 565 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms