RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 PAK3O75914 559 aaPredicted RBP28.26■■■□□ 2.11
SH3D21-202ENST00000474766 ADAMTS13Q76LX8 1427 aa28.26■■■□□ 2.11
SH3D21-202ENST00000474766 SETBP1Q9Y6X0 1596 aa28.25■■■□□ 2.11
SH3D21-202ENST00000474766 PARD3Q8TEW0 1356 aa28.23■■■□□ 2.11
SH3D21-202ENST00000474766 PER1O15534 1290 aaPredicted RBP28.23■■■□□ 2.11
SH3D21-202ENST00000474766 NUDCQ9Y266 331 aa28.23■■■□□ 2.11
SH3D21-202ENST00000474766 DISP3Q9P2K9 1392 aa28.21■■■□□ 2.11
SH3D21-202ENST00000474766 DIP2AQ14689 1571 aa28.21■■■□□ 2.11
SH3D21-202ENST00000474766 VGFO15240 615 aaPredicted RBP28.19■■■□□ 2.1
SH3D21-202ENST00000474766 STAC3Q96MF2 364 aa28.19■■■□□ 2.1
SH3D21-202ENST00000474766 NBR1Q14596 966 aa28.19■■■□□ 2.1
SH3D21-202ENST00000474766 ADGRF5Q8IZF2 1346 aa28.19■■■□□ 2.1
SH3D21-202ENST00000474766 RTL5Q5HYW3 569 aaPredicted RBP28.17■■■□□ 2.1
SH3D21-202ENST00000474766 SETD1AO15047 1707 aaKnown RBP28.16■■■□□ 2.1
SH3D21-202ENST00000474766 CCDC136Q96JN2 1154 aa28.16■■■□□ 2.1
SH3D21-202ENST00000474766 TBX22Q9Y458 520 aa28.16■■■□□ 2.1
SH3D21-202ENST00000474766 CHD2O14647 1828 aaKnown RBP28.16■■■□□ 2.1
SH3D21-202ENST00000474766 MYOM2P54296 1465 aa28.16■■■□□ 2.1
SH3D21-202ENST00000474766 ZBTB47Q9UFB7 747 aaPredicted RBP28.16■■■□□ 2.1
SH3D21-202ENST00000474766 NLRP13Q86W25 1043 aa28.14■■■□□ 2.1
SH3D21-202ENST00000474766 NWD1Q149M9 1564 aa28.14■■■□□ 2.1
SH3D21-202ENST00000474766 TMF1P82094 1093 aa28.14■■■□□ 2.09
SH3D21-202ENST00000474766 CPS1P31327 1500 aa28.14■■■□□ 2.09
SH3D21-202ENST00000474766 NRXN1Q9ULB1 1477 aa28.13■■■□□ 2.09
SH3D21-202ENST00000474766 ALKQ9UM73 1620 aa28.12■■■□□ 2.09
SH3D21-202ENST00000474766 CERKQ8TCT0 537 aa28.12■■■□□ 2.09
SH3D21-202ENST00000474766 PIK3C2GO75747 1445 aa28.11■■■□□ 2.09
SH3D21-202ENST00000474766 METP08581 1390 aa28.09■■■□□ 2.09
SH3D21-202ENST00000474766 PTPRUQ92729 1446 aa28.09■■■□□ 2.09
SH3D21-202ENST00000474766 KCNA6P17658 529 aa28.09■■■□□ 2.09
SH3D21-202ENST00000474766 LRRC7Q96NW7 1537 aa28.07■■■□□ 2.08
SH3D21-202ENST00000474766 PIK3R4Q99570 1358 aa28.07■■■□□ 2.08
SH3D21-202ENST00000474766 SLC24A1O60721 1099 aa28.06■■■□□ 2.08
SH3D21-202ENST00000474766 PANK3Q9H999 370 aa28.06■■■□□ 2.08
SH3D21-202ENST00000474766 XIRP1Q702N8 1843 aaKnown RBP28.06■■■□□ 2.08
SH3D21-202ENST00000474766 XRN1Q8IZH2 1706 aaKnown RBP28.05■■■□□ 2.08
SH3D21-202ENST00000474766 NKTRP30414 1462 aaKnown RBP28.04■■■□□ 2.08
SH3D21-202ENST00000474766 KIAA1210Q9ULL0 1709 aa28.03■■■□□ 2.08
SH3D21-202ENST00000474766 INSRP06213 1382 aa28.02■■■□□ 2.08
SH3D21-202ENST00000474766 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
SH3D21-202ENST00000474766 IQSEC2Q5JU85 1478 aa28.01■■■□□ 2.07
SH3D21-202ENST00000474766 CFAP70Q5T0N1 1121 aa28.01■■■□□ 2.07
SH3D21-202ENST00000474766 USP35Q9P2H5 1018 aa28.01■■■□□ 2.07
SH3D21-202ENST00000474766 C14orf93Q9H972 538 aaKnown RBP28■■■□□ 2.07
SH3D21-202ENST00000474766 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
SH3D21-202ENST00000474766 RBM33Q96EV2 1170 aaKnown RBP27.97■■■□□ 2.07
SH3D21-202ENST00000474766 CC2D1BQ5T0F9 858 aaKnown RBP27.97■■■□□ 2.07
SH3D21-202ENST00000474766 TMEM94Q12767 1356 aa27.95■■■□□ 2.07
SH3D21-202ENST00000474766 TCERG1O14776 1098 aaKnown RBP27.95■■■□□ 2.06
SH3D21-202ENST00000474766 PROSER2Q86WR7 435 aaPredicted RBP27.95■■■□□ 2.06
SH3D21-202ENST00000474766 CDCA8Q53HL2 280 aa27.94■■■□□ 2.06
SH3D21-202ENST00000474766 TMEM132EQ6IEE7 984 aa27.93■■■□□ 2.06
SH3D21-202ENST00000474766 SENP3-EIF4A1A0A087X0R7 540 aa27.92■■■□□ 2.06
SH3D21-202ENST00000474766 PDE3BQ13370 1112 aa27.92■■■□□ 2.06
SH3D21-202ENST00000474766 EIF3AQ14152 1382 aaKnown RBP27.91■■■□□ 2.06
SH3D21-202ENST00000474766 BLMP54132 1417 aaPredicted RBP27.91■■■□□ 2.06
SH3D21-202ENST00000474766 ADGRB1O14514 1584 aa27.9■■■□□ 2.06
SH3D21-202ENST00000474766 MS4A1P11836 297 aa27.89■■■□□ 2.05
SH3D21-202ENST00000474766 KNDC1Q76NI1 1749 aa27.88■■■□□ 2.05
SH3D21-202ENST00000474766 ROBO2Q9HCK4 1378 aa27.88■■■□□ 2.05
SH3D21-202ENST00000474766 PTCH1Q13635 1447 aa27.87■■■□□ 2.05
SH3D21-202ENST00000474766 YTHDC2Q9H6S0 1430 aaKnown RBP27.86■■■□□ 2.05
SH3D21-202ENST00000474766 AMER1Q5JTC6 1135 aaPredicted RBP27.85■■■□□ 2.05
SH3D21-202ENST00000474766 STK26Q9P289 416 aa27.85■■■□□ 2.05
SH3D21-202ENST00000474766 KNSTRNQ9Y448 316 aa27.85■■■□□ 2.05
SH3D21-202ENST00000474766 MYOM1P52179 1685 aa27.85■■■□□ 2.05
SH3D21-202ENST00000474766 TECPR2O15040 1411 aa27.84■■■□□ 2.05
SH3D21-202ENST00000474766 FBXO41Q8TF61 875 aa27.83■■■□□ 2.05
SH3D21-202ENST00000474766 PPM1GO15355 546 aaPredicted RBP27.82■■■□□ 2.04
SH3D21-202ENST00000474766 ABCC11Q96J66 1382 aa27.82■■■□□ 2.04
SH3D21-202ENST00000474766 NPC1L1Q9UHC9 1359 aa27.82■■■□□ 2.04
SH3D21-202ENST00000474766 NCOA3Q9Y6Q9 1424 aa27.82■■■□□ 2.04
SH3D21-202ENST00000474766 RRP1P56182 461 aaKnown RBP27.82■■■□□ 2.04
SH3D21-202ENST00000474766 NALCNQ8IZF0 1738 aa27.82■■■□□ 2.04
SH3D21-202ENST00000474766 UBAP1LF5GYI3 381 aa27.81■■■□□ 2.04
SH3D21-202ENST00000474766 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.8■■■□□ 2.04
SH3D21-202ENST00000474766 PPP2R1AP30153 589 aa27.78■■■□□ 2.04
SH3D21-202ENST00000474766 ANO8Q9HCE9 1232 aaPredicted RBP27.78■■■□□ 2.04
SH3D21-202ENST00000474766 MSH6P52701 1360 aa27.78■■■□□ 2.04
SH3D21-202ENST00000474766 PDE4AP27815 886 aa27.77■■■□□ 2.04
SH3D21-202ENST00000474766 BACH2Q9BYV9 841 aa27.77■■■□□ 2.04
SH3D21-202ENST00000474766 RCAN3Q9UKA8 241 aa27.77■■■□□ 2.04
SH3D21-202ENST00000474766 C14orf37Q86TY3 774 aa27.77■■■□□ 2.04
SH3D21-202ENST00000474766 PLEKHH1Q9ULM0 1364 aa27.76■■■□□ 2.03
SH3D21-202ENST00000474766 ADGRL3Q9HAR2 1447 aa27.75■■■□□ 2.03
SH3D21-202ENST00000474766 WAPLQ7Z5K2 1190 aa27.75■■■□□ 2.03
SH3D21-202ENST00000474766 TRAK1Q9UPV9 953 aa27.75■■■□□ 2.03
SH3D21-202ENST00000474766 SALL2Q9Y467 1007 aaPredicted RBP27.75■■■□□ 2.03
SH3D21-202ENST00000474766 ILDR1Q86SU0 546 aaPredicted RBP27.74■■■□□ 2.03
SH3D21-202ENST00000474766 DLC1Q96QB1 1528 aa27.74■■■□□ 2.03
SH3D21-202ENST00000474766 TOM1O60784 492 aa27.74■■■□□ 2.03
SH3D21-202ENST00000474766 NEFMP07197 916 aa27.74■■■□□ 2.03
SH3D21-202ENST00000474766 SBNO2Q9Y2G9 1366 aa27.73■■■□□ 2.03
SH3D21-202ENST00000474766 ARHGEF28Q8N1W1 1705 aaKnown RBP27.73■■■□□ 2.03
SH3D21-202ENST00000474766 FAM135BQ49AJ0 1406 aa27.72■■■□□ 2.03
SH3D21-202ENST00000474766 C19orf44Q9H6X5 657 aa27.72■■■□□ 2.03
SH3D21-202ENST00000474766 IL27Q8NEV9 243 aa27.71■■■□□ 2.03
SH3D21-202ENST00000474766 CDCA7LQ96GN5 454 aa27.71■■■□□ 2.03
SH3D21-202ENST00000474766 ADAMTS8Q9UP79 889 aa27.71■■■□□ 2.03
SH3D21-202ENST00000474766 PIP4K2BP78356 416 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms