RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 PRDM9Q9NQV7 894 aa10.03□□□□□ -0.8
GPCPD1-204ENST00000473797 USB1Q9BQ65 265 aaKnown RBP10.02□□□□□ -0.81
GPCPD1-204ENST00000473797 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
GPCPD1-204ENST00000473797 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
GPCPD1-204ENST00000473797 DXOO77932 396 aaKnown RBP10□□□□□ -0.81
GPCPD1-204ENST00000473797 MYT1Q01538 1121 aa10□□□□□ -0.81
GPCPD1-204ENST00000473797 AMHR2Q16671 573 aa10□□□□□ -0.81
GPCPD1-204ENST00000473797 PKDCCQ504Y2 493 aa10□□□□□ -0.81
GPCPD1-204ENST00000473797 TNFRSF10AO00220 468 aa9.99□□□□□ -0.81
GPCPD1-204ENST00000473797 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
GPCPD1-204ENST00000473797 HLA-CQ95604 372 aa9.98□□□□□ -0.81
GPCPD1-204ENST00000473797 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
GPCPD1-204ENST00000473797 TOR4AQ9NXH8 423 aa9.97□□□□□ -0.81
GPCPD1-204ENST00000473797 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.82
GPCPD1-204ENST00000473797 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
GPCPD1-204ENST00000473797 FAM187AA6NFU0 413 aa9.94□□□□□ -0.82
GPCPD1-204ENST00000473797 FOXC1Q12948 553 aa9.94□□□□□ -0.82
GPCPD1-204ENST00000473797 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
GPCPD1-204ENST00000473797 GUCA2AQ02747 115 aa9.93□□□□□ -0.82
GPCPD1-204ENST00000473797 WNT7AO00755 349 aa9.92□□□□□ -0.82
GPCPD1-204ENST00000473797 AVPP01185 164 aa9.92□□□□□ -0.82
GPCPD1-204ENST00000473797 TRIM32Q13049 653 aa9.92□□□□□ -0.82
GPCPD1-204ENST00000473797 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
GPCPD1-204ENST00000473797 CRIPAKQ8N1N5 446 aa9.92□□□□□ -0.82
GPCPD1-204ENST00000473797 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
GPCPD1-204ENST00000473797 JUNDP17535 347 aa9.91□□□□□ -0.82
GPCPD1-204ENST00000473797 PCDHGC3Q9UN70 934 aa9.91□□□□□ -0.82
GPCPD1-204ENST00000473797 FDX1P10109 184 aa9.9□□□□□ -0.82
GPCPD1-204ENST00000473797 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
GPCPD1-204ENST00000473797 AAASQ9NRG9 546 aa9.9□□□□□ -0.82
GPCPD1-204ENST00000473797 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
GPCPD1-204ENST00000473797 GIGYF2Q6Y7W6 1299 aaKnown RBP9.89□□□□□ -0.83
GPCPD1-204ENST00000473797 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
GPCPD1-204ENST00000473797 GJA5P36382 358 aa9.88□□□□□ -0.83
GPCPD1-204ENST00000473797 TRIM66O15016 1216 aa9.87□□□□□ -0.83
GPCPD1-204ENST00000473797 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
GPCPD1-204ENST00000473797 MOXD2PA6NHM9 499 aa9.86□□□□□ -0.83
GPCPD1-204ENST00000473797 WNT7BP56706 349 aa9.86□□□□□ -0.83
GPCPD1-204ENST00000473797 SNIP1Q8TAD8 396 aaKnown RBP9.86□□□□□ -0.83
GPCPD1-204ENST00000473797 AK7Q96M32 723 aa9.86□□□□□ -0.83
GPCPD1-204ENST00000473797 CTC1Q2NKJ3 1217 aa9.85□□□□□ -0.83
GPCPD1-204ENST00000473797 PARP9Q8IXQ6 854 aa9.85□□□□□ -0.83
GPCPD1-204ENST00000473797 CCDC24Q8N4L8 307 aa9.85□□□□□ -0.83
GPCPD1-204ENST00000473797 ST8SIA5O15466 376 aa9.84□□□□□ -0.83
GPCPD1-204ENST00000473797 NDUFV2P19404 249 aa9.84□□□□□ -0.83
GPCPD1-204ENST00000473797 SKOR1P84550 965 aa9.84□□□□□ -0.83
GPCPD1-204ENST00000473797 DIXDC1Q155Q3 683 aa9.84□□□□□ -0.83
GPCPD1-204ENST00000473797 MRGPRX2Q96LB1 330 aa9.84□□□□□ -0.83
GPCPD1-204ENST00000473797 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
GPCPD1-204ENST00000473797 SPDYE5A6NIY4 337 aa9.83□□□□□ -0.84
GPCPD1-204ENST00000473797 POTECB2RU33 542 aa9.83□□□□□ -0.84
GPCPD1-204ENST00000473797 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
GPCPD1-204ENST00000473797 DESI1Q6ICB0 168 aa9.83□□□□□ -0.84
GPCPD1-204ENST00000473797 NUDT12Q9BQG2 462 aa9.83□□□□□ -0.84
GPCPD1-204ENST00000473797 TTC24A2A3L6 582 aaPredicted RBP9.82□□□□□ -0.84
GPCPD1-204ENST00000473797 SMPD1P17405 629 aa9.82□□□□□ -0.84
GPCPD1-204ENST00000473797 ZNF775Q96BV0 537 aaPredicted RBP9.82□□□□□ -0.84
GPCPD1-204ENST00000473797 MS4A1P11836 297 aa9.81□□□□□ -0.84
GPCPD1-204ENST00000473797 PTPRNQ16849 979 aa9.81□□□□□ -0.84
GPCPD1-204ENST00000473797 RC3H1Q5TC82 1133 aaKnown RBP9.81□□□□□ -0.84
GPCPD1-204ENST00000473797 PTCRAQ6ISU1 281 aaPredicted RBP9.81□□□□□ -0.84
GPCPD1-204ENST00000473797 AXIN1O15169 862 aa9.8□□□□□ -0.84
GPCPD1-204ENST00000473797 MTMR2Q13614 643 aa9.8□□□□□ -0.84
GPCPD1-204ENST00000473797 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
GPCPD1-204ENST00000473797 EVA1BQ9NVM1 165 aa9.8□□□□□ -0.84
GPCPD1-204ENST00000473797 CCNYL3P0C7X3 344 aa9.79□□□□□ -0.84
GPCPD1-204ENST00000473797 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
GPCPD1-204ENST00000473797 SPTLC1O15269 473 aa9.78□□□□□ -0.84
GPCPD1-204ENST00000473797 PRR7Q8TB68 274 aa9.78□□□□□ -0.84
GPCPD1-204ENST00000473797 DACH1Q9UI36 760 aa9.78□□□□□ -0.84
GPCPD1-204ENST00000473797 J3QL48 77 aa9.77□□□□□ -0.85
GPCPD1-204ENST00000473797 SIAH2O43255 324 aa9.77□□□□□ -0.85
GPCPD1-204ENST00000473797 PDE4DQ08499 809 aa9.75□□□□□ -0.85
GPCPD1-204ENST00000473797 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
GPCPD1-204ENST00000473797 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
GPCPD1-204ENST00000473797 PCDHB15Q9Y5E8 787 aa9.75□□□□□ -0.85
GPCPD1-204ENST00000473797 TUSC1Q2TAM9 212 aa9.74□□□□□ -0.85
GPCPD1-204ENST00000473797 SH3BP2P78314 561 aa9.73□□□□□ -0.85
GPCPD1-204ENST00000473797 LYPD8Q6UX82 237 aa9.73□□□□□ -0.85
GPCPD1-204ENST00000473797 UNC93B1Q9H1C4 597 aa9.73□□□□□ -0.85
GPCPD1-204ENST00000473797 HRCP23327 699 aa9.72□□□□□ -0.85
GPCPD1-204ENST00000473797 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
GPCPD1-204ENST00000473797 GMPR2Q9P2T1 348 aaKnown RBP9.72□□□□□ -0.85
GPCPD1-204ENST00000473797 HPS1Q92902 700 aa9.71□□□□□ -0.86
GPCPD1-204ENST00000473797 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
GPCPD1-204ENST00000473797 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.86
GPCPD1-204ENST00000473797 CFAP99D6REC4 459 aa9.7□□□□□ -0.86
GPCPD1-204ENST00000473797 MPNDQ8N594 471 aa9.7□□□□□ -0.86
GPCPD1-204ENST00000473797 EHBP1Q8NDI1 1231 aa9.7□□□□□ -0.86
GPCPD1-204ENST00000473797 LCE2AQ5TA79 106 aaPredicted RBP9.69□□□□□ -0.86
GPCPD1-204ENST00000473797 MYSM1Q5VVJ2 828 aa9.69□□□□□ -0.86
GPCPD1-204ENST00000473797 ATP13A2Q9NQ11 1180 aa9.69□□□□□ -0.86
GPCPD1-204ENST00000473797 BAP1Q92560 729 aa9.68□□□□□ -0.86
GPCPD1-204ENST00000473797 C11orf95C9JLR9 678 aaPredicted RBP9.67□□□□□ -0.86
GPCPD1-204ENST00000473797 ALDH1A1P00352 501 aa9.67□□□□□ -0.86
GPCPD1-204ENST00000473797 F12P00748 615 aaPredicted RBP9.67□□□□□ -0.86
GPCPD1-204ENST00000473797 ZNF511Q8NB15 262 aa9.67□□□□□ -0.86
GPCPD1-204ENST00000473797 LILRB3O75022 631 aa9.66□□□□□ -0.86
GPCPD1-204ENST00000473797 VARSP26640 1264 aaKnown RBP9.66□□□□□ -0.86
GPCPD1-204ENST00000473797 LIMD1Q9UGP4 676 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms