RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 PLCB2Q00722 1185 aa15.21■□□□□ 0.03
IRF1-208ENST00000472045 AMOTL1Q8IY63 956 aa15.21■□□□□ 0.03
IRF1-208ENST00000472045 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.03
IRF1-208ENST00000472045 CABP4P57796 275 aa15.21■□□□□ 0.03
IRF1-208ENST00000472045 DHX29Q7Z478 1369 aaKnown RBP15.21■□□□□ 0.03
IRF1-208ENST00000472045 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.02
IRF1-208ENST00000472045 MFAP1P55081 439 aaKnown RBP15.2■□□□□ 0.02
IRF1-208ENST00000472045 ZNF530Q6P9A1 599 aaPredicted RBP15.2■□□□□ 0.02
IRF1-208ENST00000472045 G3BP1Q13283 466 aaKnown RBP eCLIP15.2■□□□□ 0.02
IRF1-208ENST00000472045 PTPN23Q9H3S7 1636 aa15.2■□□□□ 0.02
IRF1-208ENST00000472045 CNTLNQ9NXG0 1405 aa15.2■□□□□ 0.02
IRF1-208ENST00000472045 TNRQ92752 1358 aa15.2■□□□□ 0.02
IRF1-208ENST00000472045 KIF6Q6ZMV9 814 aa15.2■□□□□ 0.02
IRF1-208ENST00000472045 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
IRF1-208ENST00000472045 SULT6B1Q6IMI4 303 aa15.19■□□□□ 0.02
IRF1-208ENST00000472045 KCNH5Q8NCM2 988 aa15.19■□□□□ 0.02
IRF1-208ENST00000472045 RILPL2Q969X0 211 aa15.19■□□□□ 0.02
IRF1-208ENST00000472045 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
IRF1-208ENST00000472045 WDR7Q9Y4E6 1490 aa15.19■□□□□ 0.02
IRF1-208ENST00000472045 NAIPQ13075 1403 aa15.19■□□□□ 0.02
IRF1-208ENST00000472045 PPP1R1BQ9UD71 204 aaPredicted RBP15.18■□□□□ 0.02
IRF1-208ENST00000472045 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
IRF1-208ENST00000472045 IFIT2P09913 472 aaKnown RBP15.18■□□□□ 0.02
IRF1-208ENST00000472045 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
IRF1-208ENST00000472045 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
IRF1-208ENST00000472045 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
IRF1-208ENST00000472045 GOLGA6L6A8MZA4 724 aa15.17■□□□□ 0.02
IRF1-208ENST00000472045 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
IRF1-208ENST00000472045 DZIP1LQ8IYY4 767 aaKnown RBP15.17■□□□□ 0.02
IRF1-208ENST00000472045 PLCH2O75038 1416 aa15.17■□□□□ 0.02
IRF1-208ENST00000472045 ATP10BO94823 1461 aa15.17■□□□□ 0.02
IRF1-208ENST00000472045 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
IRF1-208ENST00000472045 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
IRF1-208ENST00000472045 ADAMTS2O95450 1211 aa15.16■□□□□ 0.02
IRF1-208ENST00000472045 PLIN1O60240 522 aa15.16■□□□□ 0.02
IRF1-208ENST00000472045 RAPGEF6Q8TEU7 1601 aa15.16■□□□□ 0.02
IRF1-208ENST00000472045 CCDC30Q5VVM6 783 aa15.16■□□□□ 0.02
IRF1-208ENST00000472045 TCP11L2Q8N4U5 519 aa15.15■□□□□ 0.02
IRF1-208ENST00000472045 HTATSF1O43719 755 aaKnown RBP15.15■□□□□ 0.02
IRF1-208ENST00000472045 FOXO3O43524 673 aa15.15■□□□□ 0.02
IRF1-208ENST00000472045 DIAPH3Q9NSV4 1193 aa15.15■□□□□ 0.02
IRF1-208ENST00000472045 RRS1Q15050 365 aaKnown RBP15.14■□□□□ 0.01
IRF1-208ENST00000472045 HSP90AB4PQ58FF6 505 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 PNISRQ8TF01 805 aaKnown RBP15.13■□□□□ 0.01
IRF1-208ENST00000472045 NGLY1Q96IV0 654 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
IRF1-208ENST00000472045 NCOA1Q15788 1441 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 CTDP1Q9Y5B0 961 aaPredicted RBP15.13■□□□□ 0.01
IRF1-208ENST00000472045 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
IRF1-208ENST00000472045 LRPPRCP42704 1394 aaKnown RBP15.13■□□□□ 0.01
IRF1-208ENST00000472045 ADAMTS12P58397 1594 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 RAD21O60216 631 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 VPS53Q5VIR6 699 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 FAM135AQ9P2D6 1515 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 MAP3K1Q13233 1512 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 CADPS2Q86UW7 1296 aa15.13■□□□□ 0.01
IRF1-208ENST00000472045 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
IRF1-208ENST00000472045 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
IRF1-208ENST00000472045 NRDCO43847 1150 aa15.12■□□□□ 0.01
IRF1-208ENST00000472045 RRP1P56182 461 aaKnown RBP15.12■□□□□ 0.01
IRF1-208ENST00000472045 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
IRF1-208ENST00000472045 APPP05067 770 aa15.12■□□□□ 0.01
IRF1-208ENST00000472045 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
IRF1-208ENST00000472045 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
IRF1-208ENST00000472045 WDR62O43379 1518 aa15.12■□□□□ 0.01
IRF1-208ENST00000472045 KDM5BQ9UGL1 1544 aa15.11■□□□□ 0.01
IRF1-208ENST00000472045 GPATCH8Q9UKJ3 1502 aaKnown RBP15.11■□□□□ 0.01
IRF1-208ENST00000472045 MARCH6O60337 910 aa15.11■□□□□ 0.01
IRF1-208ENST00000472045 RASSF8Q8NHQ8 419 aa15.11■□□□□ 0.01
IRF1-208ENST00000472045 UBAP1LF5GYI3 381 aa15.11■□□□□ 0.01
IRF1-208ENST00000472045 RUFY2Q8WXA3 655 aa15.11■□□□□ 0.01
IRF1-208ENST00000472045 KIF3AQ9Y496 699 aa15.11■□□□□ 0.01
IRF1-208ENST00000472045 ADGRF5Q8IZF2 1346 aa15.1■□□□□ 0.01
IRF1-208ENST00000472045 TOM1O60784 492 aa15.1■□□□□ 0.01
IRF1-208ENST00000472045 NEUROD6Q96NK8 337 aa15.1■□□□□ 0.01
IRF1-208ENST00000472045 CRBNQ96SW2 442 aa15.1■□□□□ 0.01
IRF1-208ENST00000472045 NOP58Q9Y2X3 529 aaKnown RBP15.1■□□□□ 0.01
IRF1-208ENST00000472045 WASLO00401 505 aaPredicted RBP15.09■□□□□ 0.01
IRF1-208ENST00000472045 SYNE3Q6ZMZ3 975 aa15.09■□□□□ 0.01
IRF1-208ENST00000472045 A2MP01023 1474 aa15.09■□□□□ 0.01
IRF1-208ENST00000472045 CCDC34Q96HJ3 373 aa15.09■□□□□ 0.01
IRF1-208ENST00000472045 MSH6P52701 1360 aa15.09■□□□□ 0.01
IRF1-208ENST00000472045 CENPQQ7L2Z9 268 aaPredicted RBP15.09■□□□□ 0.01
IRF1-208ENST00000472045 AKAP17AQ02040 695 aaKnown RBP15.09■□□□□ 0.01
IRF1-208ENST00000472045 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
IRF1-208ENST00000472045 NOS1P29475 1434 aa15.08■□□□□ 0
IRF1-208ENST00000472045 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
IRF1-208ENST00000472045 NUP153P49790 1475 aaKnown RBP15.07■□□□□ 0
IRF1-208ENST00000472045 ST18O60284 1047 aa15.07■□□□□ 0
IRF1-208ENST00000472045 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
IRF1-208ENST00000472045 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
IRF1-208ENST00000472045 TWISTNBQ3B726 338 aaPredicted RBP15.07■□□□□ 0
IRF1-208ENST00000472045 CHMP4CQ96CF2 233 aa15.06■□□□□ 0
IRF1-208ENST00000472045 EXOC6Q8TAG9 804 aa15.06■□□□□ 0
IRF1-208ENST00000472045 UGGT2Q9NYU1 1516 aa15.05■□□□□ 0
IRF1-208ENST00000472045 GNAI3P08754 354 aa15.05■□□□□ 0
IRF1-208ENST00000472045 CWC22Q9HCG8 908 aaKnown RBP15.05■□□□□ 0
IRF1-208ENST00000472045 ERC2O15083 957 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms