RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 POGKQ9P215 609 aa21.58■■□□□ 1.05
SNX13-205ENST00000471744 TRAK1Q9UPV9 953 aa21.58■■□□□ 1.05
SNX13-205ENST00000471744 ROCK2O75116 1388 aaKnown RBP21.58■■□□□ 1.04
SNX13-205ENST00000471744 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
SNX13-205ENST00000471744 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
SNX13-205ENST00000471744 PRAM1Q96QH2 718 aa21.56■■□□□ 1.04
SNX13-205ENST00000471744 SLAIN2Q9P270 581 aa21.56■■□□□ 1.04
SNX13-205ENST00000471744 RALGAPBQ86X10 1494 aa21.56■■□□□ 1.04
SNX13-205ENST00000471744 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
SNX13-205ENST00000471744 PIP4K2BP78356 416 aa21.55■■□□□ 1.04
SNX13-205ENST00000471744 GPRASP1Q5JY77 1395 aa21.55■■□□□ 1.04
SNX13-205ENST00000471744 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
SNX13-205ENST00000471744 ADGRB2O60241 1585 aa21.52■■□□□ 1.04
SNX13-205ENST00000471744 ROBO1Q9Y6N7 1651 aa21.51■■□□□ 1.03
SNX13-205ENST00000471744 MST1RQ04912 1400 aa21.51■■□□□ 1.03
SNX13-205ENST00000471744 EIF3AQ14152 1382 aaKnown RBP21.5■■□□□ 1.03
SNX13-205ENST00000471744 SAFB2Q14151 953 aaKnown RBP eCLIP21.49■■□□□ 1.03
SNX13-205ENST00000471744 FMN2Q9NZ56 1722 aa21.49■■□□□ 1.03
SNX13-205ENST00000471744 CARD11Q9BXL7 1154 aa21.48■■□□□ 1.03
SNX13-205ENST00000471744 C1orf167Q5SNV9 1468 aa21.46■■□□□ 1.03
SNX13-205ENST00000471744 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
SNX13-205ENST00000471744 QRICH2Q9H0J4 1663 aa21.45■■□□□ 1.02
SNX13-205ENST00000471744 MINK1Q8N4C8 1332 aaPredicted RBP21.44■■□□□ 1.02
SNX13-205ENST00000471744 BRINP3Q76B58 766 aa21.42■■□□□ 1.02
SNX13-205ENST00000471744 ANKARQ7Z5J8 1434 aa21.41■■□□□ 1.02
SNX13-205ENST00000471744 AHDC1Q5TGY3 1603 aaPredicted RBP21.4■■□□□ 1.02
SNX13-205ENST00000471744 WASLO00401 505 aaPredicted RBP21.4■■□□□ 1.02
SNX13-205ENST00000471744 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
SNX13-205ENST00000471744 PHLPP1O60346 1717 aa21.39■■□□□ 1.01
SNX13-205ENST00000471744 HSPA1LP34931 641 aa21.39■■□□□ 1.01
SNX13-205ENST00000471744 TULP4Q9NRJ4 1543 aa21.39■■□□□ 1.01
SNX13-205ENST00000471744 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
SNX13-205ENST00000471744 KIF1AQ12756 1690 aa21.38■■□□□ 1.01
SNX13-205ENST00000471744 NHSL1Q5SYE7 1610 aa21.38■■□□□ 1.01
SNX13-205ENST00000471744 SBNO2Q9Y2G9 1366 aa21.37■■□□□ 1.01
SNX13-205ENST00000471744 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
SNX13-205ENST00000471744 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
SNX13-205ENST00000471744 NUTM2FA1L443 756 aa21.35■■□□□ 1.01
SNX13-205ENST00000471744 ORAI2Q96SN7 254 aa21.35■■□□□ 1.01
SNX13-205ENST00000471744 USP32Q8NFA0 1604 aa21.34■■□□□ 1.01
SNX13-205ENST00000471744 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
SNX13-205ENST00000471744 EVC2Q86UK5 1308 aa21.33■■□□□ 1.01
SNX13-205ENST00000471744 CDK19Q9BWU1 502 aa21.33■■□□□ 1.01
SNX13-205ENST00000471744 COL16A1Q07092 1604 aaPredicted RBP21.33■■□□□ 1
SNX13-205ENST00000471744 USP47Q96K76 1375 aa21.32■■□□□ 1
SNX13-205ENST00000471744 NPHP3Q7Z494 1330 aa21.31■■□□□ 1
SNX13-205ENST00000471744 ATP7BP35670 1465 aa21.31■■□□□ 1
SNX13-205ENST00000471744 PHF8Q9UPP1 1060 aa21.3■■□□□ 1
SNX13-205ENST00000471744 SRPK2P78362 688 aaKnown RBP21.29■■□□□ 1
SNX13-205ENST00000471744 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
SNX13-205ENST00000471744 PRR36Q9H6K5 1346 aa21.29■■□□□ 1
SNX13-205ENST00000471744 TOPAZ1Q8N9V7 1692 aa21.28■■□□□ 1
SNX13-205ENST00000471744 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
SNX13-205ENST00000471744 ST20-MTHFSA0A0A6YYL1 179 aa21.27■■□□□ 1
SNX13-205ENST00000471744 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
SNX13-205ENST00000471744 SOS2Q07890 1332 aaPredicted RBP21.27■□□□□ 0.99
SNX13-205ENST00000471744 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
SNX13-205ENST00000471744 JCADQ9P266 1359 aa21.25■□□□□ 0.99
SNX13-205ENST00000471744 FOXO3O43524 673 aa21.25■□□□□ 0.99
SNX13-205ENST00000471744 SHPRHQ149N8 1683 aa21.24■□□□□ 0.99
SNX13-205ENST00000471744 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
SNX13-205ENST00000471744 DDX17Q92841 729 aaKnown RBP21.23■□□□□ 0.99
SNX13-205ENST00000471744 PUS7Q96PZ0 661 aaKnown RBP21.23■□□□□ 0.99
SNX13-205ENST00000471744 TESK2Q96S53 571 aa21.23■□□□□ 0.99
SNX13-205ENST00000471744 CABP2Q9NPB3 220 aa21.23■□□□□ 0.99
SNX13-205ENST00000471744 PXDNQ92626 1479 aa21.23■□□□□ 0.99
SNX13-205ENST00000471744 PSME1Q06323 249 aa21.22■□□□□ 0.99
SNX13-205ENST00000471744 PMFBP1Q8TBY8 1022 aa21.22■□□□□ 0.99
SNX13-205ENST00000471744 PLEKHG3A1L390 1219 aa21.21■□□□□ 0.99
SNX13-205ENST00000471744 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNX13-205ENST00000471744 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
SNX13-205ENST00000471744 PPIP5K1Q6PFW1 1433 aa21.21■□□□□ 0.99
SNX13-205ENST00000471744 TMF1P82094 1093 aa21.19■□□□□ 0.98
SNX13-205ENST00000471744 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
SNX13-205ENST00000471744 POLR3AO14802 1390 aaPredicted RBP21.19■□□□□ 0.98
SNX13-205ENST00000471744 SPATA31A6Q5VVP1 1343 aa21.18■□□□□ 0.98
SNX13-205ENST00000471744 SBNO1A3KN83 1393 aa21.18■□□□□ 0.98
SNX13-205ENST00000471744 CDCA8Q53HL2 280 aa21.17■□□□□ 0.98
SNX13-205ENST00000471744 XPCQ01831 940 aaPredicted RBP21.16■□□□□ 0.98
SNX13-205ENST00000471744 TRPM3Q9HCF6 1732 aaPredicted RBP21.15■□□□□ 0.98
SNX13-205ENST00000471744 PNPLA6Q8IY17 1366 aa21.15■□□□□ 0.98
SNX13-205ENST00000471744 ACEP12821 1306 aa21.15■□□□□ 0.98
SNX13-205ENST00000471744 TNS3Q68CZ2 1445 aa21.14■□□□□ 0.98
SNX13-205ENST00000471744 BRD4O60885 1362 aaPredicted RBP21.14■□□□□ 0.98
SNX13-205ENST00000471744 NINLQ9Y2I6 1382 aa21.14■□□□□ 0.98
SNX13-205ENST00000471744 SPATA31A3Q5VYP0 1347 aa21.14■□□□□ 0.97
SNX13-205ENST00000471744 CABP1Q9NZU7 370 aa21.14■□□□□ 0.97
SNX13-205ENST00000471744 COL22A1Q8NFW1 1626 aaPredicted RBP21.14■□□□□ 0.97
SNX13-205ENST00000471744 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
SNX13-205ENST00000471744 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
SNX13-205ENST00000471744 AKAP12Q02952 1782 aa21.12■□□□□ 0.97
SNX13-205ENST00000471744 MED1Q15648 1581 aaPredicted RBP21.11■□□□□ 0.97
SNX13-205ENST00000471744 ZNF692Q9BU19 519 aaPredicted RBP21.11■□□□□ 0.97
SNX13-205ENST00000471744 ALS2Q96Q42 1657 aa21.11■□□□□ 0.97
SNX13-205ENST00000471744 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
SNX13-205ENST00000471744 USP6P35125 1406 aa21.08■□□□□ 0.97
SNX13-205ENST00000471744 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
SNX13-205ENST00000471744 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
SNX13-205ENST00000471744 CPSF1Q10570 1443 aaKnown RBP21.06■□□□□ 0.96
SNX13-205ENST00000471744 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms