RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-208ENST00000471364 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
RUBCN-208ENST00000471364 RPGRIP1LQ68CZ1 1315 aa18.49■□□□□ 0.55
RUBCN-208ENST00000471364 ORAI2Q96SN7 254 aa18.48■□□□□ 0.55
RUBCN-208ENST00000471364 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
RUBCN-208ENST00000471364 COL22A1Q8NFW1 1626 aaPredicted RBP18.46■□□□□ 0.55
RUBCN-208ENST00000471364 USP21Q9UK80 565 aa18.45■□□□□ 0.54
RUBCN-208ENST00000471364 MARF1Q9Y4F3 1742 aaKnown RBP18.45■□□□□ 0.54
RUBCN-208ENST00000471364 TRPC5Q9UL62 973 aaPredicted RBP18.44■□□□□ 0.54
RUBCN-208ENST00000471364 ATAD2Q6PL18 1390 aa18.43■□□□□ 0.54
RUBCN-208ENST00000471364 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
RUBCN-208ENST00000471364 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
RUBCN-208ENST00000471364 FNBP4Q8N3X1 1017 aaPredicted RBP18.41■□□□□ 0.54
RUBCN-208ENST00000471364 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
RUBCN-208ENST00000471364 ESCO1Q5FWF5 840 aa18.4■□□□□ 0.54
RUBCN-208ENST00000471364 ATRNO75882 1429 aa18.39■□□□□ 0.53
RUBCN-208ENST00000471364 MYOM2P54296 1465 aa18.38■□□□□ 0.53
RUBCN-208ENST00000471364 FOXD1Q16676 465 aa18.37■□□□□ 0.53
RUBCN-208ENST00000471364 PXDNQ92626 1479 aa18.37■□□□□ 0.53
RUBCN-208ENST00000471364 LRPPRCP42704 1394 aaKnown RBP18.36■□□□□ 0.53
RUBCN-208ENST00000471364 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
RUBCN-208ENST00000471364 KNDC1Q76NI1 1749 aa18.35■□□□□ 0.53
RUBCN-208ENST00000471364 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.35■□□□□ 0.53
RUBCN-208ENST00000471364 FOXO3O43524 673 aa18.34■□□□□ 0.53
RUBCN-208ENST00000471364 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.53
RUBCN-208ENST00000471364 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
RUBCN-208ENST00000471364 TECPR2O15040 1411 aa18.32■□□□□ 0.52
RUBCN-208ENST00000471364 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
RUBCN-208ENST00000471364 KIF1AQ12756 1690 aa18.32■□□□□ 0.52
RUBCN-208ENST00000471364 ADGRF5Q8IZF2 1346 aa18.32■□□□□ 0.52
RUBCN-208ENST00000471364 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
RUBCN-208ENST00000471364 CCDC125Q86Z20 511 aa18.32■□□□□ 0.52
RUBCN-208ENST00000471364 STK26Q9P289 416 aa18.32■□□□□ 0.52
RUBCN-208ENST00000471364 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
RUBCN-208ENST00000471364 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
RUBCN-208ENST00000471364 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
RUBCN-208ENST00000471364 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
RUBCN-208ENST00000471364 WAPLQ7Z5K2 1190 aa18.3■□□□□ 0.52
RUBCN-208ENST00000471364 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
RUBCN-208ENST00000471364 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
RUBCN-208ENST00000471364 EP400Q96L91 3159 aa18.29■□□□□ 0.52
RUBCN-208ENST00000471364 RGPD8O14715 1765 aaPredicted RBP18.29■□□□□ 0.52
RUBCN-208ENST00000471364 SPATA31E1Q6ZUB1 1445 aa18.28■□□□□ 0.52
RUBCN-208ENST00000471364 PIK3C2GO75747 1445 aa18.26■□□□□ 0.51
RUBCN-208ENST00000471364 TMEM132EQ6IEE7 984 aa18.26■□□□□ 0.51
RUBCN-208ENST00000471364 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
RUBCN-208ENST00000471364 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
RUBCN-208ENST00000471364 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
RUBCN-208ENST00000471364 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
RUBCN-208ENST00000471364 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
RUBCN-208ENST00000471364 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
RUBCN-208ENST00000471364 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
RUBCN-208ENST00000471364 SLIT2O94813 1529 aa18.24■□□□□ 0.51
RUBCN-208ENST00000471364 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
RUBCN-208ENST00000471364 GLI3P10071 1580 aa18.24■□□□□ 0.51
RUBCN-208ENST00000471364 RALGAPBQ86X10 1494 aa18.23■□□□□ 0.51
RUBCN-208ENST00000471364 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
RUBCN-208ENST00000471364 MPHOSPH9Q99550 1183 aa18.23■□□□□ 0.51
RUBCN-208ENST00000471364 HAP1P54257 671 aaPredicted RBP18.22■□□□□ 0.51
RUBCN-208ENST00000471364 SIRT1Q96EB6 747 aa18.22■□□□□ 0.51
RUBCN-208ENST00000471364 SRCAPQ6ZRS2 3230 aa18.21■□□□□ 0.51
RUBCN-208ENST00000471364 NWD2Q9ULI1 1742 aa18.21■□□□□ 0.51
RUBCN-208ENST00000471364 PSME1Q06323 249 aa18.21■□□□□ 0.51
RUBCN-208ENST00000471364 PLCH1Q4KWH8 1693 aa18.21■□□□□ 0.51
RUBCN-208ENST00000471364 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
RUBCN-208ENST00000471364 TNS3Q68CZ2 1445 aa18.2■□□□□ 0.5
RUBCN-208ENST00000471364 ABCA3Q99758 1704 aa18.19■□□□□ 0.5
RUBCN-208ENST00000471364 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
RUBCN-208ENST00000471364 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
RUBCN-208ENST00000471364 C14orf93Q9H972 538 aaKnown RBP18.18■□□□□ 0.5
RUBCN-208ENST00000471364 SF3B2Q13435 895 aaKnown RBP18.17■□□□□ 0.5
RUBCN-208ENST00000471364 NRXN1Q9ULB1 1477 aa18.16■□□□□ 0.5
RUBCN-208ENST00000471364 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
RUBCN-208ENST00000471364 VPS72Q15906 364 aa18.16■□□□□ 0.5
RUBCN-208ENST00000471364 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
RUBCN-208ENST00000471364 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
RUBCN-208ENST00000471364 SEPT12Q8IYM1 358 aa18.15■□□□□ 0.5
RUBCN-208ENST00000471364 TIMELESSQ9UNS1 1208 aa18.15■□□□□ 0.5
RUBCN-208ENST00000471364 ARHGEF10O15013 1369 aa18.15■□□□□ 0.5
RUBCN-208ENST00000471364 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
RUBCN-208ENST00000471364 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
RUBCN-208ENST00000471364 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
RUBCN-208ENST00000471364 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
RUBCN-208ENST00000471364 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
RUBCN-208ENST00000471364 PRAM1Q96QH2 718 aa18.12■□□□□ 0.49
RUBCN-208ENST00000471364 DLC1Q96QB1 1528 aa18.12■□□□□ 0.49
RUBCN-208ENST00000471364 ONECUT3O60422 494 aaPredicted RBP18.11■□□□□ 0.49
RUBCN-208ENST00000471364 POGKQ9P215 609 aa18.11■□□□□ 0.49
RUBCN-208ENST00000471364 ANKARQ7Z5J8 1434 aa18.11■□□□□ 0.49
RUBCN-208ENST00000471364 ADGRB2O60241 1585 aa18.1■□□□□ 0.49
RUBCN-208ENST00000471364 KRT27Q7Z3Y8 459 aa18.1■□□□□ 0.49
RUBCN-208ENST00000471364 DEFB132Q7Z7B7 95 aa18.1■□□□□ 0.49
RUBCN-208ENST00000471364 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
RUBCN-208ENST00000471364 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
RUBCN-208ENST00000471364 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
RUBCN-208ENST00000471364 TONSLQ96HA7 1378 aa18.08■□□□□ 0.49
RUBCN-208ENST00000471364 FAM83GA6ND36 823 aa18.08■□□□□ 0.48
RUBCN-208ENST00000471364 ALS2Q96Q42 1657 aa18.08■□□□□ 0.48
RUBCN-208ENST00000471364 COL14A1Q05707 1796 aaKnown RBP18.07■□□□□ 0.48
RUBCN-208ENST00000471364 A0A0G2JS52 829 aa18.07■□□□□ 0.48
RUBCN-208ENST00000471364 MYT1Q01538 1121 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms