RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 LRPPRCP42704 1394 aaKnown RBP17.11■□□□□ 0.33
MRPL40-203ENST00000471259 PRAG1Q86YV5 1406 aa17.1■□□□□ 0.33
MRPL40-203ENST00000471259 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
MRPL40-203ENST00000471259 CLTCL1P53675 1640 aa17.09■□□□□ 0.33
MRPL40-203ENST00000471259 ATRNO75882 1429 aa17.06■□□□□ 0.32
MRPL40-203ENST00000471259 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
MRPL40-203ENST00000471259 ESCO1Q5FWF5 840 aa17.06■□□□□ 0.32
MRPL40-203ENST00000471259 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
MRPL40-203ENST00000471259 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.32
MRPL40-203ENST00000471259 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.31
MRPL40-203ENST00000471259 MYOM2P54296 1465 aa17.01■□□□□ 0.31
MRPL40-203ENST00000471259 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
MRPL40-203ENST00000471259 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
MRPL40-203ENST00000471259 NAIPQ13075 1403 aa16.99■□□□□ 0.31
MRPL40-203ENST00000471259 FOXO3O43524 673 aa16.99■□□□□ 0.31
MRPL40-203ENST00000471259 MARF1Q9Y4F3 1742 aaKnown RBP16.99■□□□□ 0.31
MRPL40-203ENST00000471259 UNC5CLQ8IV45 518 aa16.98■□□□□ 0.31
MRPL40-203ENST00000471259 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
MRPL40-203ENST00000471259 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
MRPL40-203ENST00000471259 PXDNQ92626 1479 aa16.97■□□□□ 0.31
MRPL40-203ENST00000471259 PPLO60437 1756 aa16.97■□□□□ 0.31
MRPL40-203ENST00000471259 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.31
MRPL40-203ENST00000471259 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.96■□□□□ 0.3
MRPL40-203ENST00000471259 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.3
MRPL40-203ENST00000471259 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
MRPL40-203ENST00000471259 PSME1Q06323 249 aa16.95■□□□□ 0.3
MRPL40-203ENST00000471259 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
MRPL40-203ENST00000471259 TECPR2O15040 1411 aa16.94■□□□□ 0.3
MRPL40-203ENST00000471259 ABCC11Q96J66 1382 aa16.93■□□□□ 0.3
MRPL40-203ENST00000471259 STK26Q9P289 416 aa16.93■□□□□ 0.3
MRPL40-203ENST00000471259 KIF1AQ12756 1690 aa16.93■□□□□ 0.3
MRPL40-203ENST00000471259 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
MRPL40-203ENST00000471259 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
MRPL40-203ENST00000471259 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
MRPL40-203ENST00000471259 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
MRPL40-203ENST00000471259 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
MRPL40-203ENST00000471259 SLIT2O94813 1529 aa16.91■□□□□ 0.3
MRPL40-203ENST00000471259 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
MRPL40-203ENST00000471259 SIRT1Q96EB6 747 aa16.9■□□□□ 0.3
MRPL40-203ENST00000471259 RALGAPBQ86X10 1494 aa16.9■□□□□ 0.3
MRPL40-203ENST00000471259 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
MRPL40-203ENST00000471259 CCDC9Q9Y3X0 531 aaKnown RBP16.89■□□□□ 0.29
MRPL40-203ENST00000471259 ADGRF5Q8IZF2 1346 aa16.89■□□□□ 0.29
MRPL40-203ENST00000471259 VPS72Q15906 364 aa16.88■□□□□ 0.29
MRPL40-203ENST00000471259 RGL3Q3MIN7 710 aa16.88■□□□□ 0.29
MRPL40-203ENST00000471259 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
MRPL40-203ENST00000471259 SEPT12Q8IYM1 358 aa16.87■□□□□ 0.29
MRPL40-203ENST00000471259 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
MRPL40-203ENST00000471259 ARHGEF10O15013 1369 aa16.87■□□□□ 0.29
MRPL40-203ENST00000471259 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
MRPL40-203ENST00000471259 PHF8Q9UPP1 1060 aa16.86■□□□□ 0.29
MRPL40-203ENST00000471259 EP400Q96L91 3159 aa16.86■□□□□ 0.29
MRPL40-203ENST00000471259 TNS3Q68CZ2 1445 aa16.86■□□□□ 0.29
MRPL40-203ENST00000471259 FMN2Q9NZ56 1722 aa16.85■□□□□ 0.29
MRPL40-203ENST00000471259 BAG6P46379 1132 aa16.85■□□□□ 0.29
MRPL40-203ENST00000471259 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
MRPL40-203ENST00000471259 SBNO1A3KN83 1393 aa16.85■□□□□ 0.29
MRPL40-203ENST00000471259 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
MRPL40-203ENST00000471259 YTHDC2Q9H6S0 1430 aaKnown RBP16.85■□□□□ 0.29
MRPL40-203ENST00000471259 GLI3P10071 1580 aa16.85■□□□□ 0.29
MRPL40-203ENST00000471259 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
MRPL40-203ENST00000471259 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
MRPL40-203ENST00000471259 A0A0G2JS52 829 aa16.83■□□□□ 0.28
MRPL40-203ENST00000471259 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
MRPL40-203ENST00000471259 MYT1Q01538 1121 aa16.83■□□□□ 0.28
MRPL40-203ENST00000471259 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.28
MRPL40-203ENST00000471259 NWD2Q9ULI1 1742 aa16.83■□□□□ 0.28
MRPL40-203ENST00000471259 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
MRPL40-203ENST00000471259 SPATA31E1Q6ZUB1 1445 aa16.81■□□□□ 0.28
MRPL40-203ENST00000471259 PLEKHH1Q9ULM0 1364 aa16.8■□□□□ 0.28
MRPL40-203ENST00000471259 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
MRPL40-203ENST00000471259 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
MRPL40-203ENST00000471259 IFT172Q9UG01 1749 aa16.79■□□□□ 0.28
MRPL40-203ENST00000471259 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
MRPL40-203ENST00000471259 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
MRPL40-203ENST00000471259 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
MRPL40-203ENST00000471259 LRP5O75197 1615 aa16.78■□□□□ 0.28
MRPL40-203ENST00000471259 POGKQ9P215 609 aa16.78■□□□□ 0.28
MRPL40-203ENST00000471259 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.28
MRPL40-203ENST00000471259 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
MRPL40-203ENST00000471259 PLCH1Q4KWH8 1693 aa16.77■□□□□ 0.28
MRPL40-203ENST00000471259 ANKARQ7Z5J8 1434 aa16.77■□□□□ 0.27
MRPL40-203ENST00000471259 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
MRPL40-203ENST00000471259 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
MRPL40-203ENST00000471259 FAM83GA6ND36 823 aa16.74■□□□□ 0.27
MRPL40-203ENST00000471259 BTG4Q9NY30 223 aa16.74■□□□□ 0.27
MRPL40-203ENST00000471259 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
MRPL40-203ENST00000471259 FAM98CQ17RN3 349 aaKnown RBP16.73■□□□□ 0.27
MRPL40-203ENST00000471259 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
MRPL40-203ENST00000471259 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
MRPL40-203ENST00000471259 DLC1Q96QB1 1528 aa16.71■□□□□ 0.27
MRPL40-203ENST00000471259 HRCP23327 699 aa16.71■□□□□ 0.27
MRPL40-203ENST00000471259 SAFB2Q14151 953 aaKnown RBP eCLIP16.71■□□□□ 0.27
MRPL40-203ENST00000471259 ABCA3Q99758 1704 aa16.7■□□□□ 0.26
MRPL40-203ENST00000471259 COL14A1Q05707 1796 aaKnown RBP16.7■□□□□ 0.26
MRPL40-203ENST00000471259 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
MRPL40-203ENST00000471259 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
MRPL40-203ENST00000471259 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
MRPL40-203ENST00000471259 STAC3Q96MF2 364 aa16.69■□□□□ 0.26
MRPL40-203ENST00000471259 NGDNQ8NEJ9 315 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms