RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 PPLO60437 1756 aa18.64■□□□□ 0.57
CCNL1-213ENST00000471044 MSH6P52701 1360 aa18.64■□□□□ 0.57
CCNL1-213ENST00000471044 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
CCNL1-213ENST00000471044 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
CCNL1-213ENST00000471044 PTPRUQ92729 1446 aa18.63■□□□□ 0.57
CCNL1-213ENST00000471044 ACIN1Q9UKV3 1341 aaKnown RBP18.62■□□□□ 0.57
CCNL1-213ENST00000471044 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.62■□□□□ 0.57
CCNL1-213ENST00000471044 SETD5Q9C0A6 1442 aa18.61■□□□□ 0.57
CCNL1-213ENST00000471044 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
CCNL1-213ENST00000471044 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
CCNL1-213ENST00000471044 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
CCNL1-213ENST00000471044 MPHOSPH9Q99550 1183 aa18.6■□□□□ 0.57
CCNL1-213ENST00000471044 CD44P16070 742 aaKnown RBP18.58■□□□□ 0.56
CCNL1-213ENST00000471044 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
CCNL1-213ENST00000471044 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
CCNL1-213ENST00000471044 METP08581 1390 aa18.56■□□□□ 0.56
CCNL1-213ENST00000471044 CCDC144AA2RUR9 1427 aa18.56■□□□□ 0.56
CCNL1-213ENST00000471044 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
CCNL1-213ENST00000471044 C14orf37Q86TY3 774 aa18.54■□□□□ 0.56
CCNL1-213ENST00000471044 C19orf44Q9H6X5 657 aa18.54■□□□□ 0.56
CCNL1-213ENST00000471044 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
CCNL1-213ENST00000471044 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
CCNL1-213ENST00000471044 SPATA31E1Q6ZUB1 1445 aa18.52■□□□□ 0.56
CCNL1-213ENST00000471044 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
CCNL1-213ENST00000471044 DCCP43146 1447 aa18.51■□□□□ 0.55
CCNL1-213ENST00000471044 NALCNQ8IZF0 1738 aa18.5■□□□□ 0.55
CCNL1-213ENST00000471044 ATF3P18847 181 aa18.5■□□□□ 0.55
CCNL1-213ENST00000471044 FKBP8Q14318 412 aa18.5■□□□□ 0.55
CCNL1-213ENST00000471044 GABBR2O75899 941 aa18.48■□□□□ 0.55
CCNL1-213ENST00000471044 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
CCNL1-213ENST00000471044 COL16A1Q07092 1604 aaPredicted RBP18.47■□□□□ 0.55
CCNL1-213ENST00000471044 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
CCNL1-213ENST00000471044 ADGRL3Q9HAR2 1447 aa18.47■□□□□ 0.55
CCNL1-213ENST00000471044 AHDC1Q5TGY3 1603 aaPredicted RBP18.46■□□□□ 0.55
CCNL1-213ENST00000471044 ANKRD30BQ9BXX2 1392 aa18.46■□□□□ 0.55
CCNL1-213ENST00000471044 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
CCNL1-213ENST00000471044 RGL3Q3MIN7 710 aa18.46■□□□□ 0.55
CCNL1-213ENST00000471044 JCADQ9P266 1359 aa18.45■□□□□ 0.54
CCNL1-213ENST00000471044 ADGRF5Q8IZF2 1346 aa18.45■□□□□ 0.54
CCNL1-213ENST00000471044 MST1RQ04912 1400 aa18.44■□□□□ 0.54
CCNL1-213ENST00000471044 HRCP23327 699 aa18.44■□□□□ 0.54
CCNL1-213ENST00000471044 KNDC1Q76NI1 1749 aa18.42■□□□□ 0.54
CCNL1-213ENST00000471044 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
CCNL1-213ENST00000471044 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
CCNL1-213ENST00000471044 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
CCNL1-213ENST00000471044 BRINP3Q76B58 766 aa18.4■□□□□ 0.54
CCNL1-213ENST00000471044 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.54
CCNL1-213ENST00000471044 LRP6O75581 1613 aa18.39■□□□□ 0.53
CCNL1-213ENST00000471044 SHPRHQ149N8 1683 aa18.39■□□□□ 0.53
CCNL1-213ENST00000471044 UPF1Q92900 1129 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCNL1-213ENST00000471044 MYOM2P54296 1465 aa18.38■□□□□ 0.53
CCNL1-213ENST00000471044 LAMC1P11047 1609 aa18.38■□□□□ 0.53
CCNL1-213ENST00000471044 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
CCNL1-213ENST00000471044 ZRANB1Q9UGI0 708 aa18.37■□□□□ 0.53
CCNL1-213ENST00000471044 TECPR2O15040 1411 aa18.37■□□□□ 0.53
CCNL1-213ENST00000471044 NRXN1Q9ULB1 1477 aa18.37■□□□□ 0.53
CCNL1-213ENST00000471044 LRPPRCP42704 1394 aaKnown RBP18.35■□□□□ 0.53
CCNL1-213ENST00000471044 C1orf167Q5SNV9 1468 aa18.34■□□□□ 0.53
CCNL1-213ENST00000471044 ABCC11Q96J66 1382 aa18.34■□□□□ 0.53
CCNL1-213ENST00000471044 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
CCNL1-213ENST00000471044 ZNF772Q68DY9 489 aaPredicted RBP18.34■□□□□ 0.53
CCNL1-213ENST00000471044 CDC42BPGQ6DT37 1551 aa18.33■□□□□ 0.52
CCNL1-213ENST00000471044 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
CCNL1-213ENST00000471044 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
CCNL1-213ENST00000471044 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
CCNL1-213ENST00000471044 SRCAPQ6ZRS2 3230 aa18.3■□□□□ 0.52
CCNL1-213ENST00000471044 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
CCNL1-213ENST00000471044 STK26Q9P289 416 aa18.3■□□□□ 0.52
CCNL1-213ENST00000471044 CFAP70Q5T0N1 1121 aa18.28■□□□□ 0.52
CCNL1-213ENST00000471044 WAPLQ7Z5K2 1190 aa18.28■□□□□ 0.52
CCNL1-213ENST00000471044 MIER1Q8N108 512 aa18.28■□□□□ 0.52
CCNL1-213ENST00000471044 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
CCNL1-213ENST00000471044 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
CCNL1-213ENST00000471044 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
CCNL1-213ENST00000471044 RXRBP28702 533 aa18.27■□□□□ 0.52
CCNL1-213ENST00000471044 CLCN6P51797 869 aa18.27■□□□□ 0.52
CCNL1-213ENST00000471044 LRRC59Q96AG4 307 aaKnown RBP18.27■□□□□ 0.52
CCNL1-213ENST00000471044 ORAI2Q96SN7 254 aa18.26■□□□□ 0.51
CCNL1-213ENST00000471044 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
CCNL1-213ENST00000471044 NUTM2BA6NNL0 878 aaPredicted RBP18.25■□□□□ 0.51
CCNL1-213ENST00000471044 NUTM2EB1AL46 878 aaPredicted RBP18.25■□□□□ 0.51
CCNL1-213ENST00000471044 NUTM2AQ8IVF1 878 aaPredicted RBP18.25■□□□□ 0.51
CCNL1-213ENST00000471044 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
CCNL1-213ENST00000471044 STAC3Q96MF2 364 aa18.25■□□□□ 0.51
CCNL1-213ENST00000471044 DLC1Q96QB1 1528 aa18.24■□□□□ 0.51
CCNL1-213ENST00000471044 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
CCNL1-213ENST00000471044 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
CCNL1-213ENST00000471044 ADGRB1O14514 1584 aa18.23■□□□□ 0.51
CCNL1-213ENST00000471044 CDK12Q9NYV4 1490 aaPredicted RBP18.23■□□□□ 0.51
CCNL1-213ENST00000471044 DCAF11Q8TEB1 546 aa18.23■□□□□ 0.51
CCNL1-213ENST00000471044 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
CCNL1-213ENST00000471044 PNPLA6Q8IY17 1366 aa18.22■□□□□ 0.51
CCNL1-213ENST00000471044 AFF2P51816 1311 aa18.22■□□□□ 0.51
CCNL1-213ENST00000471044 PLEKHG5O94827 1062 aa18.21■□□□□ 0.51
CCNL1-213ENST00000471044 KDM2AQ9Y2K7 1162 aa18.21■□□□□ 0.51
CCNL1-213ENST00000471044 KIF1AQ12756 1690 aa18.2■□□□□ 0.5
CCNL1-213ENST00000471044 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
CCNL1-213ENST00000471044 COL22A1Q8NFW1 1626 aaPredicted RBP18.19■□□□□ 0.5
CCNL1-213ENST00000471044 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
CCNL1-213ENST00000471044 KIAA1210Q9ULL0 1709 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms