RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 POGKQ9P215 609 aa17.89■□□□□ 0.45
SND1-209ENST00000470723 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
SND1-209ENST00000470723 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
SND1-209ENST00000470723 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
SND1-209ENST00000470723 EIF3AQ14152 1382 aaKnown RBP17.85■□□□□ 0.45
SND1-209ENST00000470723 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
SND1-209ENST00000470723 ADGRL3Q9HAR2 1447 aa17.85■□□□□ 0.45
SND1-209ENST00000470723 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.85■□□□□ 0.45
SND1-209ENST00000470723 MSH6P52701 1360 aa17.84■□□□□ 0.45
SND1-209ENST00000470723 CADPS2Q86UW7 1296 aa17.84■□□□□ 0.45
SND1-209ENST00000470723 DCCP43146 1447 aa17.83■□□□□ 0.45
SND1-209ENST00000470723 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.45
SND1-209ENST00000470723 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
SND1-209ENST00000470723 ST20-MTHFSA0A0A6YYL1 179 aa17.83■□□□□ 0.44
SND1-209ENST00000470723 TESK2Q96S53 571 aa17.83■□□□□ 0.44
SND1-209ENST00000470723 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
SND1-209ENST00000470723 USP47Q96K76 1375 aa17.81■□□□□ 0.44
SND1-209ENST00000470723 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
SND1-209ENST00000470723 ATF3P18847 181 aa17.81■□□□□ 0.44
SND1-209ENST00000470723 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.444e-7■■■■■ 27.6
SND1-209ENST00000470723 SAFB2Q14151 953 aaKnown RBP eCLIP17.81■□□□□ 0.44
SND1-209ENST00000470723 TOM1O60784 492 aa17.8■□□□□ 0.44
SND1-209ENST00000470723 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
SND1-209ENST00000470723 SLAIN2Q9P270 581 aa17.8■□□□□ 0.44
SND1-209ENST00000470723 MINK1Q8N4C8 1332 aaPredicted RBP17.79■□□□□ 0.44
SND1-209ENST00000470723 ADGRB2O60241 1585 aa17.78■□□□□ 0.44
SND1-209ENST00000470723 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
SND1-209ENST00000470723 CDK19Q9BWU1 502 aa17.77■□□□□ 0.44
SND1-209ENST00000470723 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
SND1-209ENST00000470723 HSPA5P11021 654 aaKnown RBP17.76■□□□□ 0.43
SND1-209ENST00000470723 HIRIP3Q9BW71 556 aaPredicted RBP17.76■□□□□ 0.43
SND1-209ENST00000470723 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
SND1-209ENST00000470723 MST1RQ04912 1400 aa17.74■□□□□ 0.43
SND1-209ENST00000470723 QRICH2Q9H0J4 1663 aa17.74■□□□□ 0.43
SND1-209ENST00000470723 C1orf167Q5SNV9 1468 aa17.72■□□□□ 0.43
SND1-209ENST00000470723 PIP4K2BP78356 416 aa17.72■□□□□ 0.43
SND1-209ENST00000470723 NUDT16Q96DE0 195 aaKnown RBP17.72■□□□□ 0.43
SND1-209ENST00000470723 ANKARQ7Z5J8 1434 aa17.72■□□□□ 0.43
SND1-209ENST00000470723 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
SND1-209ENST00000470723 PRR36Q9H6K5 1346 aa17.71■□□□□ 0.42
SND1-209ENST00000470723 FMN2Q9NZ56 1722 aa17.7■□□□□ 0.42
SND1-209ENST00000470723 TMF1P82094 1093 aa17.7■□□□□ 0.42
SND1-209ENST00000470723 TULP4Q9NRJ4 1543 aa17.69■□□□□ 0.42
SND1-209ENST00000470723 PLEKHG3A1L390 1219 aa17.69■□□□□ 0.42
SND1-209ENST00000470723 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
SND1-209ENST00000470723 CDCA8Q53HL2 280 aa17.68■□□□□ 0.42
SND1-209ENST00000470723 BRINP3Q76B58 766 aa17.68■□□□□ 0.42
SND1-209ENST00000470723 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
SND1-209ENST00000470723 HSPA1LP34931 641 aa17.67■□□□□ 0.42
SND1-209ENST00000470723 SRPK2P78362 688 aaKnown RBP17.67■□□□□ 0.42
SND1-209ENST00000470723 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
SND1-209ENST00000470723 ESCO1Q5FWF5 840 aa17.66■□□□□ 0.42
SND1-209ENST00000470723 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
SND1-209ENST00000470723 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
SND1-209ENST00000470723 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
SND1-209ENST00000470723 RGPD8O14715 1765 aaPredicted RBP17.65■□□□□ 0.42
SND1-209ENST00000470723 ATAD2Q6PL18 1390 aa17.65■□□□□ 0.42
SND1-209ENST00000470723 ATP7BP35670 1465 aa17.64■□□□□ 0.41
SND1-209ENST00000470723 CABP1Q9NZU7 370 aa17.62■□□□□ 0.41
SND1-209ENST00000470723 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
SND1-209ENST00000470723 ZNF692Q9BU19 519 aaPredicted RBP17.6■□□□□ 0.41
SND1-209ENST00000470723 POLR3AO14802 1390 aaPredicted RBP17.6■□□□□ 0.41
SND1-209ENST00000470723 ROBO1Q9Y6N7 1651 aa17.59■□□□□ 0.41
SND1-209ENST00000470723 NINLQ9Y2I6 1382 aa17.59■□□□□ 0.41
SND1-209ENST00000470723 SOS2Q07890 1332 aaPredicted RBP17.59■□□□□ 0.41
SND1-209ENST00000470723 FOXO3O43524 673 aa17.59■□□□□ 0.41
SND1-209ENST00000470723 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
SND1-209ENST00000470723 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
SND1-209ENST00000470723 PPIP5K1Q6PFW1 1433 aa17.58■□□□□ 0.41
SND1-209ENST00000470723 ACEP12821 1306 aa17.58■□□□□ 0.4
SND1-209ENST00000470723 NPHP3Q7Z494 1330 aa17.58■□□□□ 0.4
SND1-209ENST00000470723 TOPAZ1Q8N9V7 1692 aa17.58■□□□□ 0.4
SND1-209ENST00000470723 ITSN1Q15811 1721 aa17.57■□□□□ 0.4
SND1-209ENST00000470723 CPSF1Q10570 1443 aaKnown RBP17.56■□□□□ 0.4
SND1-209ENST00000470723 KIF1AQ12756 1690 aa17.56■□□□□ 0.4
SND1-209ENST00000470723 PSME1Q06323 249 aa17.56■□□□□ 0.4
SND1-209ENST00000470723 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
SND1-209ENST00000470723 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
SND1-209ENST00000470723 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
SND1-209ENST00000470723 AHDC1Q5TGY3 1603 aaPredicted RBP17.55■□□□□ 0.4
SND1-209ENST00000470723 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
SND1-209ENST00000470723 WASHC2AQ641Q2 1341 aa17.54■□□□□ 0.4
SND1-209ENST00000470723 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
SND1-209ENST00000470723 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
SND1-209ENST00000470723 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
SND1-209ENST00000470723 CD163L1Q9NR16 1453 aa17.53■□□□□ 0.4
SND1-209ENST00000470723 LRRC59Q96AG4 307 aaKnown RBP17.53■□□□□ 0.4
SND1-209ENST00000470723 TERF2IPQ9NYB0 399 aa17.53■□□□□ 0.4
SND1-209ENST00000470723 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
SND1-209ENST00000470723 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
SND1-209ENST00000470723 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
SND1-209ENST00000470723 PXDNQ92626 1479 aa17.51■□□□□ 0.39
SND1-209ENST00000470723 HDGFL2Q7Z4V5 671 aaPredicted RBP17.5■□□□□ 0.39
SND1-209ENST00000470723 SPATA31A3Q5VYP0 1347 aa17.49■□□□□ 0.39
SND1-209ENST00000470723 ANKRD36BQ8N2N9 1353 aa17.49■□□□□ 0.39
SND1-209ENST00000470723 USP6P35125 1406 aa17.48■□□□□ 0.39
SND1-209ENST00000470723 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
SND1-209ENST00000470723 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
SND1-209ENST00000470723 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
SND1-209ENST00000470723 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms