RNA–Protein interactions for RNA: ENST00000470386.5

GTF3C3-210, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-210ENST00000470386 GNPATO15228 680 aa7.22□□□□□ -1.25
GTF3C3-210ENST00000470386 SMCPP49901 116 aaPredicted RBP7.22□□□□□ -1.25
GTF3C3-210ENST00000470386 GRIPAP1Q4V328 841 aa7.22□□□□□ -1.25
GTF3C3-210ENST00000470386 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
GTF3C3-210ENST00000470386 SLC27A5Q9Y2P5 690 aa7.22□□□□□ -1.25
GTF3C3-210ENST00000470386 FAM160A2Q8N612 972 aaPredicted RBP7.21□□□□□ -1.26
GTF3C3-210ENST00000470386 SALL2Q9Y467 1007 aaPredicted RBP7.21□□□□□ -1.26
GTF3C3-210ENST00000470386 GCGRP47871 477 aa7.2□□□□□ -1.26
GTF3C3-210ENST00000470386 INSM1Q01101 510 aaPredicted RBP7.2□□□□□ -1.26
GTF3C3-210ENST00000470386 PRDM9Q9NQV7 894 aa7.2□□□□□ -1.26
GTF3C3-210ENST00000470386 FECHP22830 423 aa7.19□□□□□ -1.26
GTF3C3-210ENST00000470386 MSS51Q4VC12 460 aa7.19□□□□□ -1.26
GTF3C3-210ENST00000470386 RBM26Q5T8P6 1007 aaKnown RBP7.19□□□□□ -1.26
GTF3C3-210ENST00000470386 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
GTF3C3-210ENST00000470386 WNT7AO00755 349 aa7.18□□□□□ -1.26
GTF3C3-210ENST00000470386 BRICD5Q6PL45 260 aa7.18□□□□□ -1.26
GTF3C3-210ENST00000470386 NFX1Q12986 1120 aaKnown RBP7.17□□□□□ -1.26
GTF3C3-210ENST00000470386 Q3C1V9 767 aa7.17□□□□□ -1.26
GTF3C3-210ENST00000470386 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
GTF3C3-210ENST00000470386 NLRP7Q8WX94 980 aa7.17□□□□□ -1.26
GTF3C3-210ENST00000470386 SENP2Q9HC62 589 aa7.17□□□□□ -1.26
GTF3C3-210ENST00000470386 TRIM32Q13049 653 aa7.16□□□□□ -1.26
GTF3C3-210ENST00000470386 RNF19BQ6ZMZ0 732 aa7.16□□□□□ -1.26
GTF3C3-210ENST00000470386 REPIN1Q9BWE0 567 aaKnown RBP7.16□□□□□ -1.26
GTF3C3-210ENST00000470386 ATP13A2Q9NQ11 1180 aa7.16□□□□□ -1.26
GTF3C3-210ENST00000470386 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
GTF3C3-210ENST00000470386 WIPF1O43516 503 aa7.15□□□□□ -1.26
GTF3C3-210ENST00000470386 SMPD1P17405 629 aa7.14□□□□□ -1.27
GTF3C3-210ENST00000470386 MRGPRX2Q96LB1 330 aa7.14□□□□□ -1.27
GTF3C3-210ENST00000470386 SMARCA4P51532 1647 aa7.13□□□□□ -1.27
GTF3C3-210ENST00000470386 KIFC2Q96AC6 838 aa7.13□□□□□ -1.27
GTF3C3-210ENST00000470386 TRIM47Q96LD4 638 aa7.13□□□□□ -1.27
GTF3C3-210ENST00000470386 J3QL48 77 aa7.12□□□□□ -1.27
GTF3C3-210ENST00000470386 TERTO14746 1132 aaKnown RBP7.12□□□□□ -1.27
GTF3C3-210ENST00000470386 MMP16P51512 607 aa7.12□□□□□ -1.27
GTF3C3-210ENST00000470386 CCDC24Q8N4L8 307 aa7.12□□□□□ -1.27
GTF3C3-210ENST00000470386 GPR37O15354 613 aa7.11□□□□□ -1.27
GTF3C3-210ENST00000470386 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
GTF3C3-210ENST00000470386 USB1Q9BQ65 265 aaKnown RBP7.11□□□□□ -1.27
GTF3C3-210ENST00000470386 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
GTF3C3-210ENST00000470386 PHOX2BQ99453 314 aa7.1□□□□□ -1.27
GTF3C3-210ENST00000470386 BAZ1AQ9NRL2 1556 aaPredicted RBP7.1□□□□□ -1.27
GTF3C3-210ENST00000470386 SMARCA2P51531 1590 aa7.09□□□□□ -1.27
GTF3C3-210ENST00000470386 GPIHBP1Q8IV16 184 aa7.09□□□□□ -1.27
GTF3C3-210ENST00000470386 SLC16A10Q8TF71 515 aa7.09□□□□□ -1.27
GTF3C3-210ENST00000470386 HPS1Q92902 700 aa7.09□□□□□ -1.27
GTF3C3-210ENST00000470386 MROH2BQ7Z745 1585 aa7.08□□□□□ -1.28
GTF3C3-210ENST00000470386 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
GTF3C3-210ENST00000470386 KDM4AO75164 1064 aa7.08□□□□□ -1.28
GTF3C3-210ENST00000470386 DXOO77932 396 aaKnown RBP7.08□□□□□ -1.28
GTF3C3-210ENST00000470386 RC3H1Q5TC82 1133 aaKnown RBP7.08□□□□□ -1.28
GTF3C3-210ENST00000470386 NCAPD3P42695 1498 aa7.08□□□□□ -1.28
GTF3C3-210ENST00000470386 BAZ1BQ9UIG0 1483 aaKnown RBP7.08□□□□□ -1.28
GTF3C3-210ENST00000470386 ERCC6Q03468 1493 aa7.07□□□□□ -1.28
GTF3C3-210ENST00000470386 CD46P15529 392 aa7.07□□□□□ -1.28
GTF3C3-210ENST00000470386 WNT7BP56706 349 aa7.07□□□□□ -1.28
GTF3C3-210ENST00000470386 USP46P62068 366 aa7.07□□□□□ -1.28
GTF3C3-210ENST00000470386 ALDH1A1P00352 501 aa7.06□□□□□ -1.28
GTF3C3-210ENST00000470386 SKOR1P84550 965 aa7.04□□□□□ -1.28
GTF3C3-210ENST00000470386 NESP48681 1621 aa7.04□□□□□ -1.28
GTF3C3-210ENST00000470386 HMGXB3Q12766 1538 aa7.03□□□□□ -1.28
GTF3C3-210ENST00000470386 EHBP1Q8NDI1 1231 aa7.03□□□□□ -1.28
GTF3C3-210ENST00000470386 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
GTF3C3-210ENST00000470386 WASF2Q9Y6W5 498 aa7.03□□□□□ -1.28
GTF3C3-210ENST00000470386 WIZO95785 1651 aa7.03□□□□□ -1.28
GTF3C3-210ENST00000470386 HOXA2O43364 376 aa7.01□□□□□ -1.29
GTF3C3-210ENST00000470386 JUNDP17535 347 aa7.01□□□□□ -1.29
GTF3C3-210ENST00000470386 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
GTF3C3-210ENST00000470386 MAP2K5Q13163 448 aa7.01□□□□□ -1.29
GTF3C3-210ENST00000470386 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
GTF3C3-210ENST00000470386 IRF7Q92985 503 aa7.01□□□□□ -1.29
GTF3C3-210ENST00000470386 HLA-CQ95604 372 aa7.01□□□□□ -1.29
GTF3C3-210ENST00000470386 TULP1O00294 542 aaPredicted RBP7□□□□□ -1.29
GTF3C3-210ENST00000470386 CAPN5O15484 640 aaPredicted RBP7□□□□□ -1.29
GTF3C3-210ENST00000470386 NUDT12Q9BQG2 462 aa7□□□□□ -1.29
GTF3C3-210ENST00000470386 BMP1P13497 986 aa6.99□□□□□ -1.29
GTF3C3-210ENST00000470386 NPAS3Q8IXF0 933 aa6.99□□□□□ -1.29
GTF3C3-210ENST00000470386 ZSCAN1Q8NBB4 408 aa6.99□□□□□ -1.29
GTF3C3-210ENST00000470386 PEG3Q9GZU2 1588 aa6.99□□□□□ -1.29
GTF3C3-210ENST00000470386 GUCA2AQ02747 115 aa6.98□□□□□ -1.29
GTF3C3-210ENST00000470386 RETREG3Q86VR2 466 aa6.98□□□□□ -1.29
GTF3C3-210ENST00000470386 NUTM1Q86Y26 1132 aa6.98□□□□□ -1.29
GTF3C3-210ENST00000470386 GMPRP36959 345 aa6.97□□□□□ -1.29
GTF3C3-210ENST00000470386 IRF6O14896 467 aa6.96□□□□□ -1.3
GTF3C3-210ENST00000470386 SIAH2O43255 324 aa6.96□□□□□ -1.3
GTF3C3-210ENST00000470386 TRIM46Q7Z4K8 759 aa6.96□□□□□ -1.3
GTF3C3-210ENST00000470386 KRI1Q8N9T8 703 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-210ENST00000470386 SYMPKQ92797 1274 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-210ENST00000470386 RSF1Q96T23 1441 aaPredicted RBP6.95□□□□□ -1.3
GTF3C3-210ENST00000470386 C6orf229H3BNL8 230 aa6.95□□□□□ -1.3
GTF3C3-210ENST00000470386 CLCN1P35523 988 aa6.95□□□□□ -1.3
GTF3C3-210ENST00000470386 VEGFBP49765 207 aa6.95□□□□□ -1.3
GTF3C3-210ENST00000470386 GPCPD1Q9NPB8 672 aa6.95□□□□□ -1.3
GTF3C3-210ENST00000470386 MINK1Q8N4C8 1332 aaPredicted RBP6.95□□□□□ -1.3
GTF3C3-210ENST00000470386 CCNYL3P0C7X3 344 aa6.94□□□□□ -1.3
GTF3C3-210ENST00000470386 MS4A1P11836 297 aa6.94□□□□□ -1.3
GTF3C3-210ENST00000470386 PTCRAQ6ISU1 281 aaPredicted RBP6.94□□□□□ -1.3
GTF3C3-210ENST00000470386 KIF21AQ7Z4S6 1674 aa6.93□□□□□ -1.3
GTF3C3-210ENST00000470386 PLEKHG3A1L390 1219 aa6.93□□□□□ -1.3
GTF3C3-210ENST00000470386 H3BM21 787 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms