RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 FAM160A2Q8N612 972 aaPredicted RBP11.17□□□□□ -0.62
VPS8-219ENST00000469479 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
VPS8-219ENST00000469479 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
VPS8-219ENST00000469479 GCGRP47871 477 aa11.16□□□□□ -0.62
VPS8-219ENST00000469479 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
VPS8-219ENST00000469479 ATP13A2Q9NQ11 1180 aa11.15□□□□□ -0.62
VPS8-219ENST00000469479 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
VPS8-219ENST00000469479 GRIPAP1Q4V328 841 aa11.14□□□□□ -0.63
VPS8-219ENST00000469479 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
VPS8-219ENST00000469479 BRICD5Q6PL45 260 aa11.14□□□□□ -0.63
VPS8-219ENST00000469479 FECHP22830 423 aa11.12□□□□□ -0.63
VPS8-219ENST00000469479 MSS51Q4VC12 460 aa11.12□□□□□ -0.63
VPS8-219ENST00000469479 TRIM47Q96LD4 638 aa11.12□□□□□ -0.63
VPS8-219ENST00000469479 WNT7AO00755 349 aa11.09□□□□□ -0.63
VPS8-219ENST00000469479 SLC16A10Q8TF71 515 aa11.09□□□□□ -0.63
VPS8-219ENST00000469479 Q3C1V9 767 aa11.08□□□□□ -0.64
VPS8-219ENST00000469479 SNIP1Q8TAD8 396 aaKnown RBP11.08□□□□□ -0.64
VPS8-219ENST00000469479 PRDM9Q9NQV7 894 aa11.08□□□□□ -0.64
VPS8-219ENST00000469479 GPR37O15354 613 aa11.07□□□□□ -0.64
VPS8-219ENST00000469479 KIFC2Q96AC6 838 aa11.07□□□□□ -0.64
VPS8-219ENST00000469479 SMPD1P17405 629 aa11.06□□□□□ -0.64
VPS8-219ENST00000469479 NLRP7Q8WX94 980 aa11.06□□□□□ -0.64
VPS8-219ENST00000469479 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
VPS8-219ENST00000469479 ZSCAN1Q8NBB4 408 aa11.05□□□□□ -0.64
VPS8-219ENST00000469479 MMP16P51512 607 aa11.04□□□□□ -0.64
VPS8-219ENST00000469479 TRIM32Q13049 653 aa11.04□□□□□ -0.64
VPS8-219ENST00000469479 PHOX2BQ99453 314 aa11.04□□□□□ -0.64
VPS8-219ENST00000469479 REPIN1Q9BWE0 567 aaKnown RBP11.02□□□□□ -0.65
VPS8-219ENST00000469479 SUZ12Q15022 739 aaKnown RBP11□□□□□ -0.65
VPS8-219ENST00000469479 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
VPS8-219ENST00000469479 GMPRP36959 345 aa10.99□□□□□ -0.65
VPS8-219ENST00000469479 USB1Q9BQ65 265 aaKnown RBP10.99□□□□□ -0.65
VPS8-219ENST00000469479 NXF1Q9UBU9 619 aaKnown RBP10.99□□□□□ -0.65
VPS8-219ENST00000469479 J3QL48 77 aa10.98□□□□□ -0.65
VPS8-219ENST00000469479 DXOO77932 396 aaKnown RBP10.97□□□□□ -0.65
VPS8-219ENST00000469479 IRF7Q92985 503 aa10.97□□□□□ -0.65
VPS8-219ENST00000469479 CD46P15529 392 aa10.96□□□□□ -0.65
VPS8-219ENST00000469479 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.65
VPS8-219ENST00000469479 KDM4AO75164 1064 aa10.95□□□□□ -0.66
VPS8-219ENST00000469479 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
VPS8-219ENST00000469479 USP46P62068 366 aa10.95□□□□□ -0.66
VPS8-219ENST00000469479 HPS1Q92902 700 aa10.95□□□□□ -0.66
VPS8-219ENST00000469479 WNT7BP56706 349 aa10.94□□□□□ -0.66
VPS8-219ENST00000469479 NPAS3Q8IXF0 933 aa10.93□□□□□ -0.66
VPS8-219ENST00000469479 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
VPS8-219ENST00000469479 CCDC24Q8N4L8 307 aa10.92□□□□□ -0.66
VPS8-219ENST00000469479 CCDC180Q9P1Z9 1646 aa10.91□□□□□ -0.66
VPS8-219ENST00000469479 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
VPS8-219ENST00000469479 SKOR1P84550 965 aa10.87□□□□□ -0.67
VPS8-219ENST00000469479 VEGFBP49765 207 aa10.86□□□□□ -0.67
VPS8-219ENST00000469479 ALDH1A1P00352 501 aa10.85□□□□□ -0.67
VPS8-219ENST00000469479 IRF6O14896 467 aa10.84□□□□□ -0.67
VPS8-219ENST00000469479 HOXA2O43364 376 aa10.84□□□□□ -0.67
VPS8-219ENST00000469479 JUNDP17535 347 aa10.84□□□□□ -0.67
VPS8-219ENST00000469479 H3BM21 787 aa10.83□□□□□ -0.68
VPS8-219ENST00000469479 MDM2Q00987 491 aaPredicted RBP10.83□□□□□ -0.68
VPS8-219ENST00000469479 HLA-CQ95604 372 aa10.82□□□□□ -0.68
VPS8-219ENST00000469479 MINK1Q8N4C8 1332 aaPredicted RBP10.82□□□□□ -0.68
VPS8-219ENST00000469479 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
VPS8-219ENST00000469479 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
VPS8-219ENST00000469479 ERBB4Q15303 1308 aa10.8□□□□□ -0.68
VPS8-219ENST00000469479 TULP1O00294 542 aaPredicted RBP10.79□□□□□ -0.68
VPS8-219ENST00000469479 SIAH2O43255 324 aa10.79□□□□□ -0.68
VPS8-219ENST00000469479 RETREG3Q86VR2 466 aa10.79□□□□□ -0.68
VPS8-219ENST00000469479 NUDT12Q9BQG2 462 aa10.79□□□□□ -0.68
VPS8-219ENST00000469479 WASF2Q9Y6W5 498 aa10.79□□□□□ -0.68
VPS8-219ENST00000469479 BMP1P13497 986 aa10.78□□□□□ -0.68
VPS8-219ENST00000469479 KCTD17Q8N5Z5 321 aa10.78□□□□□ -0.68
VPS8-219ENST00000469479 CAPN5O15484 640 aaPredicted RBP10.77□□□□□ -0.69
VPS8-219ENST00000469479 NUTM1Q86Y26 1132 aa10.77□□□□□ -0.69
VPS8-219ENST00000469479 CLCN1P35523 988 aa10.76□□□□□ -0.69
VPS8-219ENST00000469479 TRIM46Q7Z4K8 759 aa10.76□□□□□ -0.69
VPS8-219ENST00000469479 GPCPD1Q9NPB8 672 aa10.76□□□□□ -0.69
VPS8-219ENST00000469479 GUCA2AQ02747 115 aa10.75□□□□□ -0.69
VPS8-219ENST00000469479 KCNMA1Q12791 1236 aa10.75□□□□□ -0.69
VPS8-219ENST00000469479 PTCRAQ6ISU1 281 aaPredicted RBP10.75□□□□□ -0.69
VPS8-219ENST00000469479 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
VPS8-219ENST00000469479 FAM217BQ9NTX9 383 aaPredicted RBP10.74□□□□□ -0.69
VPS8-219ENST00000469479 MS4A1P11836 297 aa10.72□□□□□ -0.69
VPS8-219ENST00000469479 CCNYL3P0C7X3 344 aa10.71□□□□□ -0.69
VPS8-219ENST00000469479 SH3BP2P78314 561 aa10.71□□□□□ -0.69
VPS8-219ENST00000469479 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
VPS8-219ENST00000469479 CCDC102AQ96A19 550 aa10.71□□□□□ -0.69
VPS8-219ENST00000469479 FDX1P10109 184 aa10.7□□□□□ -0.7
VPS8-219ENST00000469479 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
VPS8-219ENST00000469479 PTPRNQ16849 979 aa10.69□□□□□ -0.7
VPS8-219ENST00000469479 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
VPS8-219ENST00000469479 ZFP42Q96MM3 310 aa10.68□□□□□ -0.7
VPS8-219ENST00000469479 EVA1BQ9NVM1 165 aa10.68□□□□□ -0.7
VPS8-219ENST00000469479 TMEM151AQ8N4L1 468 aa10.67□□□□□ -0.7
VPS8-219ENST00000469479 MPNDQ8N594 471 aa10.67□□□□□ -0.7
VPS8-219ENST00000469479 UNC93B1Q9H1C4 597 aa10.66□□□□□ -0.7
VPS8-219ENST00000469479 PCDHGC3Q9UN70 934 aa10.66□□□□□ -0.7
VPS8-219ENST00000469479 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
VPS8-219ENST00000469479 GSK3AP49840 483 aa10.65□□□□□ -0.7
VPS8-219ENST00000469479 GDF11O95390 407 aa10.64□□□□□ -0.71
VPS8-219ENST00000469479 VSIG8P0DPA2 414 aa10.63□□□□□ -0.71
VPS8-219ENST00000469479 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
VPS8-219ENST00000469479 SCARF1Q14162 830 aa10.63□□□□□ -0.71
VPS8-219ENST00000469479 BAP1Q92560 729 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms