RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 STAC3Q96MF2 364 aa15.48■□□□□ 0.07
VARS2-205ENST00000469358 FANCAO15360 1455 aa15.47■□□□□ 0.07
VARS2-205ENST00000469358 MAPK8IP3Q9UPT6 1336 aa15.47■□□□□ 0.07
VARS2-205ENST00000469358 CABP2Q9NPB3 220 aa15.47■□□□□ 0.07
VARS2-205ENST00000469358 RTEL1-TNFRSF6BF6WH68 1400 aa15.46■□□□□ 0.07
VARS2-205ENST00000469358 ATP7AQ04656 1500 aa15.46■□□□□ 0.07
VARS2-205ENST00000469358 MAP3K4Q9Y6R4 1608 aa15.45■□□□□ 0.06
VARS2-205ENST00000469358 TET3O43151 1660 aa15.45■□□□□ 0.06
VARS2-205ENST00000469358 U2SURPO15042 1029 aaKnown RBP15.45■□□□□ 0.06
VARS2-205ENST00000469358 TBC1D2Q9BYX2 928 aa15.45■□□□□ 0.06
VARS2-205ENST00000469358 STK26Q9P289 416 aa15.44■□□□□ 0.06
VARS2-205ENST00000469358 NLRP1Q9C000 1473 aa15.44■□□□□ 0.06
VARS2-205ENST00000469358 ADGRL1O94910 1474 aa15.44■□□□□ 0.06
VARS2-205ENST00000469358 PMFBP1Q8TBY8 1022 aa15.43■□□□□ 0.06
VARS2-205ENST00000469358 GZF1Q9H116 711 aaPredicted RBP15.43■□□□□ 0.06
VARS2-205ENST00000469358 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
VARS2-205ENST00000469358 MROH2AA6NES4 1674 aa15.42■□□□□ 0.06
VARS2-205ENST00000469358 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
VARS2-205ENST00000469358 BECN1Q14457 450 aa15.42■□□□□ 0.06
VARS2-205ENST00000469358 FTSJ3Q8IY81 847 aaKnown RBP15.42■□□□□ 0.06
VARS2-205ENST00000469358 PHF23Q9BUL5 403 aaPredicted RBP15.42■□□□□ 0.06
VARS2-205ENST00000469358 EXOSC9Q06265 439 aaKnown RBP15.42■□□□□ 0.06
VARS2-205ENST00000469358 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
VARS2-205ENST00000469358 EIF5BO60841 1220 aaKnown RBP15.41■□□□□ 0.06
VARS2-205ENST00000469358 ANTXR1Q9H6X2 564 aa15.41■□□□□ 0.06
VARS2-205ENST00000469358 C14orf93Q9H972 538 aaKnown RBP15.41■□□□□ 0.06
VARS2-205ENST00000469358 DEPDC5O75140 1603 aa15.41■□□□□ 0.06
VARS2-205ENST00000469358 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
VARS2-205ENST00000469358 SHPRHQ149N8 1683 aa15.41■□□□□ 0.06
VARS2-205ENST00000469358 MROH1Q8NDA8 1641 aa15.4■□□□□ 0.06
VARS2-205ENST00000469358 MYOM2P54296 1465 aa15.4■□□□□ 0.06
VARS2-205ENST00000469358 FBLN1P23142 703 aa15.4■□□□□ 0.06
VARS2-205ENST00000469358 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
VARS2-205ENST00000469358 WDR63Q8IWG1 891 aa15.4■□□□□ 0.06
VARS2-205ENST00000469358 CFAP53Q96M91 514 aa15.4■□□□□ 0.06
VARS2-205ENST00000469358 ITPRIPQ8IWB1 547 aa15.4■□□□□ 0.06
VARS2-205ENST00000469358 RWDD1Q9H446 243 aaPredicted RBP15.4■□□□□ 0.06
VARS2-205ENST00000469358 VWDEQ8N2E2 1590 aa15.39■□□□□ 0.05
VARS2-205ENST00000469358 NGEFQ8N5V2 710 aa15.39■□□□□ 0.05
VARS2-205ENST00000469358 UPF2Q9HAU5 1272 aaKnown RBP15.39■□□□□ 0.05
VARS2-205ENST00000469358 IQSEC2Q5JU85 1478 aa15.39■□□□□ 0.05
VARS2-205ENST00000469358 PRKCSHP14314 528 aaPredicted RBP15.39■□□□□ 0.05
VARS2-205ENST00000469358 DZIP1LQ8IYY4 767 aaKnown RBP15.39■□□□□ 0.05
VARS2-205ENST00000469358 SSH1Q8WYL5 1049 aa15.39■□□□□ 0.05
VARS2-205ENST00000469358 TRIM27P14373 513 aa15.38■□□□□ 0.05
VARS2-205ENST00000469358 ZKSCAN2Q63HK3 967 aa15.38■□□□□ 0.05
VARS2-205ENST00000469358 PPRC1Q5VV67 1664 aaKnown RBP15.37■□□□□ 0.05
VARS2-205ENST00000469358 ZNF518AQ6AHZ1 1483 aa15.37■□□□□ 0.05
VARS2-205ENST00000469358 MYH16Q9H6N6 1097 aa15.37■□□□□ 0.05
VARS2-205ENST00000469358 NINLQ9Y2I6 1382 aa15.37■□□□□ 0.05
VARS2-205ENST00000469358 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
VARS2-205ENST00000469358 INO80Q9ULG1 1556 aaPredicted RBP15.37■□□□□ 0.05
VARS2-205ENST00000469358 UHRF1BP1LA0JNW5 1464 aa15.36■□□□□ 0.05
VARS2-205ENST00000469358 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
VARS2-205ENST00000469358 SRPK2P78362 688 aaKnown RBP15.36■□□□□ 0.05
VARS2-205ENST00000469358 NOB1Q9ULX3 412 aaKnown RBP15.36■□□□□ 0.05
VARS2-205ENST00000469358 NPATQ14207 1427 aa15.36■□□□□ 0.05
VARS2-205ENST00000469358 EFCAB6Q5THR3 1501 aa15.35■□□□□ 0.05
VARS2-205ENST00000469358 KIF1BO60333 1816 aa15.35■□□□□ 0.05
VARS2-205ENST00000469358 SBNO2Q9Y2G9 1366 aa15.35■□□□□ 0.05
VARS2-205ENST00000469358 TRIM35Q9UPQ4 493 aa15.35■□□□□ 0.05
VARS2-205ENST00000469358 TMEM57Q8N5G2 664 aa15.34■□□□□ 0.05
VARS2-205ENST00000469358 TMPOP42166 694 aaKnown RBP15.34■□□□□ 0.05
VARS2-205ENST00000469358 C22orf23Q9BZE7 217 aa15.34■□□□□ 0.05
VARS2-205ENST00000469358 NRXN1Q9ULB1 1477 aa15.34■□□□□ 0.05
VARS2-205ENST00000469358 MINK1Q8N4C8 1332 aaPredicted RBP15.34■□□□□ 0.05
VARS2-205ENST00000469358 CD109Q6YHK3 1445 aa15.33■□□□□ 0.04
VARS2-205ENST00000469358 EVC2Q86UK5 1308 aa15.33■□□□□ 0.04
VARS2-205ENST00000469358 PANK2Q9BZ23 570 aa15.33■□□□□ 0.04
VARS2-205ENST00000469358 CCDC27Q2M243 656 aa15.32■□□□□ 0.04
VARS2-205ENST00000469358 VIRMAQ69YN4 1812 aaKnown RBP15.32■□□□□ 0.04
VARS2-205ENST00000469358 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
VARS2-205ENST00000469358 LNPKQ9C0E8 428 aa15.32■□□□□ 0.04
VARS2-205ENST00000469358 ADGRB1O14514 1584 aa15.31■□□□□ 0.04
VARS2-205ENST00000469358 RAPGEF3O95398 923 aa15.31■□□□□ 0.04
VARS2-205ENST00000469358 RIPK4P57078 832 aa15.31■□□□□ 0.04
VARS2-205ENST00000469358 PLEKHF1Q96S99 279 aa15.31■□□□□ 0.04
VARS2-205ENST00000469358 RRAGDQ9NQL2 400 aaPredicted RBP15.31■□□□□ 0.04
VARS2-205ENST00000469358 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
VARS2-205ENST00000469358 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
VARS2-205ENST00000469358 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
VARS2-205ENST00000469358 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
VARS2-205ENST00000469358 ADGRB3O60242 1522 aa15.3■□□□□ 0.04
VARS2-205ENST00000469358 ATF7IPQ6VMQ6 1270 aa15.3■□□□□ 0.04
VARS2-205ENST00000469358 ABCA9Q8IUA7 1624 aa15.3■□□□□ 0.04
VARS2-205ENST00000469358 ELL2O00472 640 aaPredicted RBP15.3■□□□□ 0.04
VARS2-205ENST00000469358 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
VARS2-205ENST00000469358 IFT172Q9UG01 1749 aa15.3■□□□□ 0.04
VARS2-205ENST00000469358 ANKRD36BQ8N2N9 1353 aa15.29■□□□□ 0.04
VARS2-205ENST00000469358 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
VARS2-205ENST00000469358 MCM4P33991 863 aa15.29■□□□□ 0.04
VARS2-205ENST00000469358 TULP4Q9NRJ4 1543 aa15.28■□□□□ 0.04
VARS2-205ENST00000469358 FYB1O15117 783 aa15.28■□□□□ 0.04
VARS2-205ENST00000469358 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
VARS2-205ENST00000469358 XRCC6P12956 609 aaKnown RBP eCLIP15.28■□□□□ 0.04
VARS2-205ENST00000469358 IDI1Q13907 227 aa15.27■□□□□ 0.04
VARS2-205ENST00000469358 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.04
VARS2-205ENST00000469358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.27■□□□□ 0.04
VARS2-205ENST00000469358 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
VARS2-205ENST00000469358 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms