RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.36■■□□□ 1.49
PCCB-209ENST00000469217 C11orf95C9JLR9 678 aaPredicted RBP24.34■■□□□ 1.49
PCCB-209ENST00000469217 ZNF316A6NFI3 1004 aaPredicted RBP24.33■■□□□ 1.48
PCCB-209ENST00000469217 TMEM94Q12767 1356 aa24.33■■□□□ 1.48
PCCB-209ENST00000469217 TMF1P82094 1093 aa24.32■■□□□ 1.48
PCCB-209ENST00000469217 DISP3Q9P2K9 1392 aa24.32■■□□□ 1.48
PCCB-209ENST00000469217 SLC24A1O60721 1099 aa24.31■■□□□ 1.48
PCCB-209ENST00000469217 LRRC7Q96NW7 1537 aa24.31■■□□□ 1.48
PCCB-209ENST00000469217 TULP4Q9NRJ4 1543 aa24.3■■□□□ 1.48
PCCB-209ENST00000469217 NALCNQ8IZF0 1738 aa24.29■■□□□ 1.48
PCCB-209ENST00000469217 EVC2Q86UK5 1308 aa24.29■■□□□ 1.48
PCCB-209ENST00000469217 LTBP4Q8N2S1 1624 aa24.29■■□□□ 1.48
PCCB-209ENST00000469217 ADGRB2O60241 1585 aa24.29■■□□□ 1.48
PCCB-209ENST00000469217 C14orf37Q86TY3 774 aa24.28■■□□□ 1.48
PCCB-209ENST00000469217 ADGRL3Q9HAR2 1447 aa24.28■■□□□ 1.48
PCCB-209ENST00000469217 NCOA3Q9Y6Q9 1424 aa24.27■■□□□ 1.48
PCCB-209ENST00000469217 WASLO00401 505 aaPredicted RBP24.26■■□□□ 1.47
PCCB-209ENST00000469217 XIRP1Q702N8 1843 aaKnown RBP24.26■■□□□ 1.47
PCCB-209ENST00000469217 CDK19Q9BWU1 502 aa24.26■■□□□ 1.47
PCCB-209ENST00000469217 KIF7Q2M1P5 1343 aa24.26■■□□□ 1.47
PCCB-209ENST00000469217 WASHC2AQ641Q2 1341 aa24.26■■□□□ 1.47
PCCB-209ENST00000469217 C19orf44Q9H6X5 657 aa24.24■■□□□ 1.47
PCCB-209ENST00000469217 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
PCCB-209ENST00000469217 SRPK2P78362 688 aaKnown RBP24.23■■□□□ 1.47
PCCB-209ENST00000469217 CCDC7Q96M83 1385 aa24.23■■□□□ 1.47
PCCB-209ENST00000469217 CDCA8Q53HL2 280 aa24.22■■□□□ 1.47
PCCB-209ENST00000469217 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
PCCB-209ENST00000469217 CDC42BPGQ6DT37 1551 aa24.21■■□□□ 1.47
PCCB-209ENST00000469217 NUTM2FA1L443 756 aa24.19■■□□□ 1.46
PCCB-209ENST00000469217 MSH6P52701 1360 aa24.18■■□□□ 1.46
PCCB-209ENST00000469217 PUS7Q96PZ0 661 aaKnown RBP24.18■■□□□ 1.46
PCCB-209ENST00000469217 FMN2Q9NZ56 1722 aa24.16■■□□□ 1.46
PCCB-209ENST00000469217 DCCP43146 1447 aa24.16■■□□□ 1.46
PCCB-209ENST00000469217 PRR36Q9H6K5 1346 aa24.15■■□□□ 1.46
PCCB-209ENST00000469217 ATF3P18847 181 aa24.14■■□□□ 1.46
PCCB-209ENST00000469217 NUDT16Q96DE0 195 aaKnown RBP24.14■■□□□ 1.46
PCCB-209ENST00000469217 ATAD2Q6PL18 1390 aa24.14■■□□□ 1.46
PCCB-209ENST00000469217 ATP7BP35670 1465 aa24.14■■□□□ 1.46
PCCB-209ENST00000469217 USP32Q8NFA0 1604 aa24.14■■□□□ 1.45
PCCB-209ENST00000469217 CADPS2Q86UW7 1296 aa24.13■■□□□ 1.45
PCCB-209ENST00000469217 ANKARQ7Z5J8 1434 aa24.11■■□□□ 1.45
PCCB-209ENST00000469217 CCDC61Q9Y6R9 512 aa24.11■■□□□ 1.45
PCCB-209ENST00000469217 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
PCCB-209ENST00000469217 MYOM1P52179 1685 aa24.1■■□□□ 1.45
PCCB-209ENST00000469217 RGPD8O14715 1765 aaPredicted RBP24.1■■□□□ 1.45
PCCB-209ENST00000469217 SLC12A5Q9H2X9 1139 aa24.1■■□□□ 1.45
PCCB-209ENST00000469217 MST1RQ04912 1400 aa24.08■■□□□ 1.45
PCCB-209ENST00000469217 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
PCCB-209ENST00000469217 CABP1Q9NZU7 370 aa24.08■■□□□ 1.45
PCCB-209ENST00000469217 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.45
PCCB-209ENST00000469217 TOPAZ1Q8N9V7 1692 aa24.07■■□□□ 1.44
PCCB-209ENST00000469217 C1orf167Q5SNV9 1468 aa24.06■■□□□ 1.44
PCCB-209ENST00000469217 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
PCCB-209ENST00000469217 ITSN1Q15811 1721 aa24.04■■□□□ 1.44
PCCB-209ENST00000469217 ESCO1Q5FWF5 840 aa24.03■■□□□ 1.44
PCCB-209ENST00000469217 ORAI2Q96SN7 254 aa24.03■■□□□ 1.44
PCCB-209ENST00000469217 PMFBP1Q8TBY8 1022 aa24.03■■□□□ 1.44
PCCB-209ENST00000469217 CERKQ8TCT0 537 aa24.03■■□□□ 1.44
PCCB-209ENST00000469217 SLAIN2Q9P270 581 aa24.03■■□□□ 1.44
PCCB-209ENST00000469217 PLEKHG3A1L390 1219 aa24.02■■□□□ 1.44
PCCB-209ENST00000469217 PANK3Q9H999 370 aa24.02■■□□□ 1.44
PCCB-209ENST00000469217 CD163L1Q9NR16 1453 aa24.01■■□□□ 1.43
PCCB-209ENST00000469217 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
PCCB-209ENST00000469217 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
PCCB-209ENST00000469217 ANKRD36BQ8N2N9 1353 aa23.99■■□□□ 1.43
PCCB-209ENST00000469217 ACEP12821 1306 aa23.99■■□□□ 1.43
PCCB-209ENST00000469217 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
PCCB-209ENST00000469217 TERF2IPQ9NYB0 399 aa23.98■■□□□ 1.43
PCCB-209ENST00000469217 CPSF1Q10570 1443 aaKnown RBP23.97■■□□□ 1.43
PCCB-209ENST00000469217 NGDNQ8NEJ9 315 aaKnown RBP23.96■■□□□ 1.43
PCCB-209ENST00000469217 POLR3AO14802 1390 aaPredicted RBP23.96■■□□□ 1.43
PCCB-209ENST00000469217 HDGFL2Q7Z4V5 671 aaPredicted RBP23.96■■□□□ 1.43
PCCB-209ENST00000469217 CARD14Q9BXL6 1004 aa23.96■■□□□ 1.43
PCCB-209ENST00000469217 BRINP3Q76B58 766 aa23.95■■□□□ 1.42
PCCB-209ENST00000469217 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
PCCB-209ENST00000469217 TOM1O60784 492 aa23.94■■□□□ 1.42
PCCB-209ENST00000469217 KIF1AQ12756 1690 aa23.93■■□□□ 1.42
PCCB-209ENST00000469217 FOXO3O43524 673 aa23.93■■□□□ 1.42
PCCB-209ENST00000469217 ZNF692Q9BU19 519 aaPredicted RBP23.93■■□□□ 1.42
PCCB-209ENST00000469217 AKAP12Q02952 1782 aa23.93■■□□□ 1.42
PCCB-209ENST00000469217 KTN1Q86UP2 1357 aaKnown RBP23.92■■□□□ 1.42
PCCB-209ENST00000469217 UBAP1LF5GYI3 381 aa23.91■■□□□ 1.42
PCCB-209ENST00000469217 MON2Q7Z3U7 1717 aa23.89■■□□□ 1.42
PCCB-209ENST00000469217 USP6P35125 1406 aa23.89■■□□□ 1.42
PCCB-209ENST00000469217 NSD3Q9BZ95 1437 aa23.89■■□□□ 1.42
PCCB-209ENST00000469217 DDX17Q92841 729 aaKnown RBP23.89■■□□□ 1.41
PCCB-209ENST00000469217 PSME1Q06323 249 aa23.88■■□□□ 1.41
PCCB-209ENST00000469217 KNSTRNQ9Y448 316 aa23.87■■□□□ 1.41
PCCB-209ENST00000469217 ROBO1Q9Y6N7 1651 aa23.87■■□□□ 1.41
PCCB-209ENST00000469217 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
PCCB-209ENST00000469217 PIP4K2BP78356 416 aa23.86■■□□□ 1.41
PCCB-209ENST00000469217 XPCQ01831 940 aaPredicted RBP23.86■■□□□ 1.41
PCCB-209ENST00000469217 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
PCCB-209ENST00000469217 NPHP3Q7Z494 1330 aa23.85■■□□□ 1.41
PCCB-209ENST00000469217 DIEXFQ68CQ4 756 aaKnown RBP23.85■■□□□ 1.41
PCCB-209ENST00000469217 NRKQ7Z2Y5 1582 aa23.84■■□□□ 1.41
PCCB-209ENST00000469217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
PCCB-209ENST00000469217 KRT28Q7Z3Y7 464 aa23.83■■□□□ 1.41
PCCB-209ENST00000469217 TTC21BQ7Z4L5 1316 aa23.83■■□□□ 1.4
PCCB-209ENST00000469217 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms