RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CHMP4BQ9H444 224 aaKnown RBP15.78■□□□□ 0.12
USP11-206ENST00000469080 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
USP11-206ENST00000469080 NAP1L2Q9ULW6 460 aaPredicted RBP15.76■□□□□ 0.11
USP11-206ENST00000469080 LTV1Q96GA3 475 aaPredicted RBP15.76■□□□□ 0.11
USP11-206ENST00000469080 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
USP11-206ENST00000469080 TSPOAP1O95153 1857 aa15.75■□□□□ 0.11
USP11-206ENST00000469080 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
USP11-206ENST00000469080 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
USP11-206ENST00000469080 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
USP11-206ENST00000469080 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
USP11-206ENST00000469080 CGNL1Q0VF96 1302 aa15.75■□□□□ 0.11
USP11-206ENST00000469080 KDM5CP41229 1560 aa15.75■□□□□ 0.11
USP11-206ENST00000469080 HDGFL2Q7Z4V5 671 aaPredicted RBP15.75■□□□□ 0.11
USP11-206ENST00000469080 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
USP11-206ENST00000469080 TNNQ9UQP3 1299 aa15.75■□□□□ 0.11
USP11-206ENST00000469080 YEATS2Q9ULM3 1422 aa15.74■□□□□ 0.11
USP11-206ENST00000469080 ATP10AO60312 1499 aa15.73■□□□□ 0.11
USP11-206ENST00000469080 SMG6Q86US8 1419 aaKnown RBP15.73■□□□□ 0.11
USP11-206ENST00000469080 RRS1Q15050 365 aaKnown RBP15.73■□□□□ 0.11
USP11-206ENST00000469080 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
USP11-206ENST00000469080 ABCC1P33527 1531 aa15.72■□□□□ 0.11
USP11-206ENST00000469080 ARHGEF5Q12774 1597 aa15.72■□□□□ 0.11
USP11-206ENST00000469080 APBB1O00213 710 aa15.72■□□□□ 0.11
USP11-206ENST00000469080 SPRYD3Q8NCJ5 442 aa15.72■□□□□ 0.11
USP11-206ENST00000469080 PLEKHH1Q9ULM0 1364 aa15.71■□□□□ 0.11
USP11-206ENST00000469080 PARD3Q8TEW0 1356 aa15.71■□□□□ 0.11
USP11-206ENST00000469080 C14orf93Q9H972 538 aaKnown RBP15.71■□□□□ 0.11
USP11-206ENST00000469080 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.11
USP11-206ENST00000469080 SCAF11Q99590 1463 aaKnown RBP15.71■□□□□ 0.1
USP11-206ENST00000469080 PDE3BQ13370 1112 aa15.7■□□□□ 0.1
USP11-206ENST00000469080 MAGI2Q86UL8 1455 aa15.7■□□□□ 0.1
USP11-206ENST00000469080 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
USP11-206ENST00000469080 ABCA9Q8IUA7 1624 aa15.7■□□□□ 0.1
USP11-206ENST00000469080 SMC4Q9NTJ3 1288 aa15.69■□□□□ 0.1
USP11-206ENST00000469080 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
USP11-206ENST00000469080 PDE4AP27815 886 aa15.68■□□□□ 0.1
USP11-206ENST00000469080 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
USP11-206ENST00000469080 MAST1Q9Y2H9 1570 aa15.68■□□□□ 0.1
USP11-206ENST00000469080 RIPK4P57078 832 aa15.68■□□□□ 0.1
USP11-206ENST00000469080 DUSP27Q5VZP5 1158 aa15.68■□□□□ 0.1
USP11-206ENST00000469080 NPATQ14207 1427 aa15.67■□□□□ 0.1
USP11-206ENST00000469080 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
USP11-206ENST00000469080 PRDM4Q9UKN5 801 aa15.67■□□□□ 0.1
USP11-206ENST00000469080 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
USP11-206ENST00000469080 COL17A1Q9UMD9 1497 aaPredicted RBP15.66■□□□□ 0.1
USP11-206ENST00000469080 FRAT2O75474 233 aaPredicted RBP15.66■□□□□ 0.1
USP11-206ENST00000469080 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
USP11-206ENST00000469080 NME9Q86XW9 330 aa15.66■□□□□ 0.1
USP11-206ENST00000469080 DCTN1Q14203 1278 aa15.66■□□□□ 0.1
USP11-206ENST00000469080 WWC1Q8IX03 1113 aa15.66■□□□□ 0.1
USP11-206ENST00000469080 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
USP11-206ENST00000469080 EMILIN1Q9Y6C2 1016 aa15.66■□□□□ 0.1
USP11-206ENST00000469080 ARID3AQ99856 593 aa15.64■□□□□ 0.1
USP11-206ENST00000469080 SLC52A1Q9NWF4 448 aa15.64■□□□□ 0.09
USP11-206ENST00000469080 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
USP11-206ENST00000469080 RUNDC1Q96C34 613 aa15.63■□□□□ 0.09
USP11-206ENST00000469080 EXOSC9Q06265 439 aaKnown RBP15.63■□□□□ 0.09
USP11-206ENST00000469080 ZHX1Q9UKY1 873 aaPredicted RBP15.63■□□□□ 0.09
USP11-206ENST00000469080 E9PSI1 815 aa15.63■□□□□ 0.09
USP11-206ENST00000469080 PRKAR2BP31323 418 aa15.63■□□□□ 0.09
USP11-206ENST00000469080 SLFN5Q08AF3 891 aa15.63■□□□□ 0.09
USP11-206ENST00000469080 DDRGK1Q96HY6 314 aa15.63■□□□□ 0.09
USP11-206ENST00000469080 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
USP11-206ENST00000469080 POGZQ7Z3K3 1410 aa15.62■□□□□ 0.09
USP11-206ENST00000469080 PRDM15P57071 1507 aaPredicted RBP15.61■□□□□ 0.09
USP11-206ENST00000469080 PDCL3Q9H2J4 239 aa15.61■□□□□ 0.09
USP11-206ENST00000469080 ZFYVE16Q7Z3T8 1539 aa15.61■□□□□ 0.09
USP11-206ENST00000469080 XPCQ01831 940 aaPredicted RBP15.61■□□□□ 0.09
USP11-206ENST00000469080 GPRASP1Q5JY77 1395 aa15.6■□□□□ 0.09
USP11-206ENST00000469080 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
USP11-206ENST00000469080 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
USP11-206ENST00000469080 LRPPRCP42704 1394 aaKnown RBP15.6■□□□□ 0.09
USP11-206ENST00000469080 C1orf115Q9H7X2 142 aa15.59■□□□□ 0.09
USP11-206ENST00000469080 FYB1O15117 783 aa15.59■□□□□ 0.09
USP11-206ENST00000469080 PLCD3Q8N3E9 789 aa15.59■□□□□ 0.09
USP11-206ENST00000469080 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.09
USP11-206ENST00000469080 STAC3Q96MF2 364 aa15.58■□□□□ 0.08
USP11-206ENST00000469080 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
USP11-206ENST00000469080 GTF2E1P29083 439 aaPredicted RBP15.58■□□□□ 0.08
USP11-206ENST00000469080 COG3Q96JB2 828 aa15.58■□□□□ 0.08
USP11-206ENST00000469080 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
USP11-206ENST00000469080 E9PCH4 1651 aa15.56■□□□□ 0.08
USP11-206ENST00000469080 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
USP11-206ENST00000469080 SLKQ9H2G2 1235 aaPredicted RBP15.55■□□□□ 0.08
USP11-206ENST00000469080 ARAP3Q8WWN8 1544 aa15.55■□□□□ 0.08
USP11-206ENST00000469080 L1TD1Q5T7N2 865 aaKnown RBP15.55■□□□□ 0.08
USP11-206ENST00000469080 EID1Q9Y6B2 187 aa15.55■□□□□ 0.08
USP11-206ENST00000469080 DIP2BQ9P265 1576 aa15.55■□□□□ 0.08
USP11-206ENST00000469080 CLCN1P35523 988 aa15.55■□□□□ 0.08
USP11-206ENST00000469080 MYH16Q9H6N6 1097 aa15.54■□□□□ 0.08
USP11-206ENST00000469080 NEO1Q92859 1461 aa15.54■□□□□ 0.08
USP11-206ENST00000469080 TRPM1Q7Z4N2 1603 aa15.54■□□□□ 0.08
USP11-206ENST00000469080 IGHDP01880 384 aa15.53■□□□□ 0.08
USP11-206ENST00000469080 RLBP1P12271 317 aa15.53■□□□□ 0.08
USP11-206ENST00000469080 SLC4A10Q6U841 1118 aa15.53■□□□□ 0.08
USP11-206ENST00000469080 AMPHP49418 695 aa15.53■□□□□ 0.08
USP11-206ENST00000469080 KIDINS220Q9ULH0 1771 aa15.53■□□□□ 0.08
USP11-206ENST00000469080 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
USP11-206ENST00000469080 ASXL1Q8IXJ9 1541 aa15.52■□□□□ 0.07
USP11-206ENST00000469080 A0A1W2PP64 1363 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms