RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 DCAF11Q8TEB1 546 aa10.5□□□□□ -0.73
SNRPD3-205ENST00000468770 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
SNRPD3-205ENST00000468770 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
SNRPD3-205ENST00000468770 SIRT1Q96EB6 747 aa10.49□□□□□ -0.73
SNRPD3-205ENST00000468770 IFT172Q9UG01 1749 aa10.49□□□□□ -0.73
SNRPD3-205ENST00000468770 TECPR2O15040 1411 aa10.49□□□□□ -0.73
SNRPD3-205ENST00000468770 YTHDC2Q9H6S0 1430 aaKnown RBP10.49□□□□□ -0.73
SNRPD3-205ENST00000468770 ZNF772Q68DY9 489 aaPredicted RBP10.48□□□□□ -0.73
SNRPD3-205ENST00000468770 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
SNRPD3-205ENST00000468770 MYOM2P54296 1465 aa10.48□□□□□ -0.73
SNRPD3-205ENST00000468770 POGKQ9P215 609 aa10.47□□□□□ -0.73
SNRPD3-205ENST00000468770 SOS2Q07890 1332 aaPredicted RBP10.47□□□□□ -0.73
SNRPD3-205ENST00000468770 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
SNRPD3-205ENST00000468770 NRXN1Q9ULB1 1477 aa10.47□□□□□ -0.73
SNRPD3-205ENST00000468770 FOXO3O43524 673 aa10.46□□□□□ -0.73
SNRPD3-205ENST00000468770 SAFB2Q14151 953 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNRPD3-205ENST00000468770 PRAM1Q96QH2 718 aa10.46□□□□□ -0.73
SNRPD3-205ENST00000468770 NPHP3Q7Z494 1330 aa10.46□□□□□ -0.73
SNRPD3-205ENST00000468770 LRP6O75581 1613 aa10.46□□□□□ -0.74
SNRPD3-205ENST00000468770 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
SNRPD3-205ENST00000468770 SHPRHQ149N8 1683 aa10.46□□□□□ -0.74
SNRPD3-205ENST00000468770 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
SNRPD3-205ENST00000468770 CDC42BPGQ6DT37 1551 aa10.44□□□□□ -0.74
SNRPD3-205ENST00000468770 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
SNRPD3-205ENST00000468770 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
SNRPD3-205ENST00000468770 TRAK1Q9UPV9 953 aa10.44□□□□□ -0.74
SNRPD3-205ENST00000468770 XPCQ01831 940 aaPredicted RBP10.43□□□□□ -0.74
SNRPD3-205ENST00000468770 NGLY1Q96IV0 654 aa10.43□□□□□ -0.74
SNRPD3-205ENST00000468770 LAMC1P11047 1609 aa10.43□□□□□ -0.74
SNRPD3-205ENST00000468770 KNDC1Q76NI1 1749 aa10.42□□□□□ -0.74
SNRPD3-205ENST00000468770 AFF2P51816 1311 aa10.42□□□□□ -0.74
SNRPD3-205ENST00000468770 RXRBP28702 533 aa10.42□□□□□ -0.74
SNRPD3-205ENST00000468770 HIRIP3Q9BW71 556 aaPredicted RBP10.41□□□□□ -0.74
SNRPD3-205ENST00000468770 PHF8Q9UPP1 1060 aa10.41□□□□□ -0.74
SNRPD3-205ENST00000468770 PSME1Q06323 249 aa10.4□□□□□ -0.74
SNRPD3-205ENST00000468770 KRT28Q7Z3Y7 464 aa10.4□□□□□ -0.74
SNRPD3-205ENST00000468770 QTRT2Q9H974 415 aaKnown RBP10.4□□□□□ -0.74
SNRPD3-205ENST00000468770 MINK1Q8N4C8 1332 aaPredicted RBP10.39□□□□□ -0.75
SNRPD3-205ENST00000468770 DLC1Q96QB1 1528 aa10.39□□□□□ -0.75
SNRPD3-205ENST00000468770 ADGRB1O14514 1584 aa10.39□□□□□ -0.75
SNRPD3-205ENST00000468770 PXDNQ92626 1479 aa10.38□□□□□ -0.75
SNRPD3-205ENST00000468770 PMFBP1Q8TBY8 1022 aa10.38□□□□□ -0.75
SNRPD3-205ENST00000468770 USP21Q9UK80 565 aa10.38□□□□□ -0.75
SNRPD3-205ENST00000468770 FMN2Q9NZ56 1722 aa10.38□□□□□ -0.75
SNRPD3-205ENST00000468770 SPATA31A3Q5VYP0 1347 aa10.37□□□□□ -0.75
SNRPD3-205ENST00000468770 WASLO00401 505 aaPredicted RBP10.37□□□□□ -0.75
SNRPD3-205ENST00000468770 RBM6P78332 1123 aaKnown RBP10.37□□□□□ -0.75
SNRPD3-205ENST00000468770 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
SNRPD3-205ENST00000468770 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
SNRPD3-205ENST00000468770 NEUROD1Q13562 356 aa10.36□□□□□ -0.75
SNRPD3-205ENST00000468770 FNBP4Q8N3X1 1017 aaPredicted RBP10.36□□□□□ -0.75
SNRPD3-205ENST00000468770 SIN3AQ96ST3 1273 aa10.36□□□□□ -0.75
SNRPD3-205ENST00000468770 EIF3AQ14152 1382 aaKnown RBP10.36□□□□□ -0.75
SNRPD3-205ENST00000468770 KIF1AQ12756 1690 aa10.35□□□□□ -0.75
SNRPD3-205ENST00000468770 ANKARQ7Z5J8 1434 aa10.35□□□□□ -0.75
SNRPD3-205ENST00000468770 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
SNRPD3-205ENST00000468770 NBPF1Q3BBV0 1214 aa10.35□□□□□ -0.75
SNRPD3-205ENST00000468770 L3MBTL2Q969R5 705 aa10.35□□□□□ -0.75
SNRPD3-205ENST00000468770 TRPC5Q9UL62 973 aaPredicted RBP10.35□□□□□ -0.75
SNRPD3-205ENST00000468770 NGDNQ8NEJ9 315 aaKnown RBP10.34□□□□□ -0.75
SNRPD3-205ENST00000468770 GPRASP1Q5JY77 1395 aa10.34□□□□□ -0.75
SNRPD3-205ENST00000468770 RGPD8O14715 1765 aaPredicted RBP10.34□□□□□ -0.75
SNRPD3-205ENST00000468770 COL22A1Q8NFW1 1626 aaPredicted RBP10.33□□□□□ -0.76
SNRPD3-205ENST00000468770 CABLES1Q8TDN4 633 aa10.33□□□□□ -0.76
SNRPD3-205ENST00000468770 NUDT16Q96DE0 195 aaKnown RBP10.33□□□□□ -0.76
SNRPD3-205ENST00000468770 CDK19Q9BWU1 502 aa10.33□□□□□ -0.76
SNRPD3-205ENST00000468770 SBNO1A3KN83 1393 aa10.33□□□□□ -0.76
SNRPD3-205ENST00000468770 TNS3Q68CZ2 1445 aa10.33□□□□□ -0.76
SNRPD3-205ENST00000468770 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
SNRPD3-205ENST00000468770 ADGRB2O60241 1585 aa10.32□□□□□ -0.76
SNRPD3-205ENST00000468770 CDK12Q9NYV4 1490 aaPredicted RBP10.32□□□□□ -0.76
SNRPD3-205ENST00000468770 ARHGEF10O15013 1369 aa10.32□□□□□ -0.76
SNRPD3-205ENST00000468770 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
SNRPD3-205ENST00000468770 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
SNRPD3-205ENST00000468770 TULP4Q9NRJ4 1543 aa10.31□□□□□ -0.76
SNRPD3-205ENST00000468770 USP32Q8NFA0 1604 aa10.3□□□□□ -0.76
SNRPD3-205ENST00000468770 TRIM26Q12899 539 aaPredicted RBP10.3□□□□□ -0.76
SNRPD3-205ENST00000468770 UNC5CLQ8IV45 518 aa10.3□□□□□ -0.76
SNRPD3-205ENST00000468770 CCDC61Q9Y6R9 512 aa10.3□□□□□ -0.76
SNRPD3-205ENST00000468770 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
SNRPD3-205ENST00000468770 KIAA1210Q9ULL0 1709 aa10.3□□□□□ -0.76
SNRPD3-205ENST00000468770 BCL9LQ86UU0 1499 aa10.3□□□□□ -0.76
SNRPD3-205ENST00000468770 SRPK2P78362 688 aaKnown RBP10.29□□□□□ -0.76
SNRPD3-205ENST00000468770 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
SNRPD3-205ENST00000468770 ATRNO75882 1429 aa10.29□□□□□ -0.76
SNRPD3-205ENST00000468770 ARHGEF28Q8N1W1 1705 aaKnown RBP10.29□□□□□ -0.76
SNRPD3-205ENST00000468770 RGS12O14924 1447 aa10.28□□□□□ -0.76
SNRPD3-205ENST00000468770 PLEKHG3A1L390 1219 aa10.27□□□□□ -0.77
SNRPD3-205ENST00000468770 FAM83GA6ND36 823 aa10.27□□□□□ -0.77
SNRPD3-205ENST00000468770 NBPF8Q3BBV2 869 aa10.27□□□□□ -0.77
SNRPD3-205ENST00000468770 CCDC9Q9Y3X0 531 aaKnown RBP10.27□□□□□ -0.77
SNRPD3-205ENST00000468770 ACEP12821 1306 aa10.27□□□□□ -0.77
SNRPD3-205ENST00000468770 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.77
SNRPD3-205ENST00000468770 ROCK2O75116 1388 aaKnown RBP10.26□□□□□ -0.77
SNRPD3-205ENST00000468770 ATP7BP35670 1465 aa10.26□□□□□ -0.77
SNRPD3-205ENST00000468770 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
SNRPD3-205ENST00000468770 SLIT2O94813 1529 aa10.26□□□□□ -0.77
SNRPD3-205ENST00000468770 VPS72Q15906 364 aa10.25□□□□□ -0.77
SNRPD3-205ENST00000468770 ATAD2Q6PL18 1390 aa10.25□□□□□ -0.77
SNRPD3-205ENST00000468770 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms