RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 HIC1Q14526 733 aa10.07□□□□□ -0.8
SSB-208ENST00000468600 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
SSB-208ENST00000468600 FUT2Q10981 343 aa10.06□□□□□ -0.8
SSB-208ENST00000468600 TRIM32Q13049 653 aa10.06□□□□□ -0.8
SSB-208ENST00000468600 FMNL1O95466 1100 aaPredicted RBP10.05□□□□□ -0.8
SSB-208ENST00000468600 SUZ12Q15022 739 aaKnown RBP10.05□□□□□ -0.8
SSB-208ENST00000468600 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
SSB-208ENST00000468600 SEMA3EO15041 775 aa10.04□□□□□ -0.8
SSB-208ENST00000468600 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
SSB-208ENST00000468600 BRICD5Q6PL45 260 aa10.04□□□□□ -0.8
SSB-208ENST00000468600 SLC16A10Q8TF71 515 aa10.04□□□□□ -0.8
SSB-208ENST00000468600 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
SSB-208ENST00000468600 MSS51Q4VC12 460 aa10.03□□□□□ -0.8
SSB-208ENST00000468600 RDH13Q8NBN7 331 aa10.03□□□□□ -0.8
SSB-208ENST00000468600 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
SSB-208ENST00000468600 ATP6V1AP38606 617 aa10.01□□□□□ -0.81
SSB-208ENST00000468600 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
SSB-208ENST00000468600 ERBB4Q15303 1308 aa10□□□□□ -0.81
SSB-208ENST00000468600 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
SSB-208ENST00000468600 IRF7Q92985 503 aa9.99□□□□□ -0.81
SSB-208ENST00000468600 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
SSB-208ENST00000468600 H3BM21 787 aa9.98□□□□□ -0.81
SSB-208ENST00000468600 VEGFBP49765 207 aa9.98□□□□□ -0.81
SSB-208ENST00000468600 NPAS3Q8IXF0 933 aa9.98□□□□□ -0.81
SSB-208ENST00000468600 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
SSB-208ENST00000468600 GNPATO15228 680 aa9.97□□□□□ -0.81
SSB-208ENST00000468600 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
SSB-208ENST00000468600 FECHP22830 423 aa9.96□□□□□ -0.82
SSB-208ENST00000468600 SULF1Q8IWU6 871 aa9.96□□□□□ -0.82
SSB-208ENST00000468600 BMP1P13497 986 aa9.95□□□□□ -0.82
SSB-208ENST00000468600 MMP16P51512 607 aa9.95□□□□□ -0.82
SSB-208ENST00000468600 TRIM46Q7Z4K8 759 aa9.95□□□□□ -0.82
SSB-208ENST00000468600 GCGRP47871 477 aa9.94□□□□□ -0.82
SSB-208ENST00000468600 SKOR1P84550 965 aa9.94□□□□□ -0.82
SSB-208ENST00000468600 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
SSB-208ENST00000468600 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
SSB-208ENST00000468600 RC3H1Q5TC82 1133 aaKnown RBP9.92□□□□□ -0.82
SSB-208ENST00000468600 GRIPAP1Q4V328 841 aa9.91□□□□□ -0.82
SSB-208ENST00000468600 NLRP7Q8WX94 980 aa9.91□□□□□ -0.82
SSB-208ENST00000468600 GSK3AP49840 483 aa9.9□□□□□ -0.82
SSB-208ENST00000468600 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
SSB-208ENST00000468600 GPR37O15354 613 aa9.88□□□□□ -0.83
SSB-208ENST00000468600 ALDH1A1P00352 501 aa9.88□□□□□ -0.83
SSB-208ENST00000468600 WNT7BP56706 349 aa9.88□□□□□ -0.83
SSB-208ENST00000468600 PLCB2Q00722 1185 aa9.86□□□□□ -0.83
SSB-208ENST00000468600 KCTD17Q8N5Z5 321 aa9.86□□□□□ -0.83
SSB-208ENST00000468600 Q3C1V9 767 aa9.85□□□□□ -0.83
SSB-208ENST00000468600 CAPN5O15484 640 aaPredicted RBP9.83□□□□□ -0.84
SSB-208ENST00000468600 SIAH2O43255 324 aa9.83□□□□□ -0.84
SSB-208ENST00000468600 KCNMA1Q12791 1236 aa9.83□□□□□ -0.84
SSB-208ENST00000468600 GPIHBP1Q8IV16 184 aa9.83□□□□□ -0.84
SSB-208ENST00000468600 PHOX2BQ99453 314 aa9.83□□□□□ -0.84
SSB-208ENST00000468600 VSIG8P0DPA2 414 aa9.82□□□□□ -0.84
SSB-208ENST00000468600 USB1Q9BQ65 265 aaKnown RBP9.81□□□□□ -0.84
SSB-208ENST00000468600 CCDC24Q8N4L8 307 aa9.8□□□□□ -0.84
SSB-208ENST00000468600 ZFP42Q96MM3 310 aa9.8□□□□□ -0.84
SSB-208ENST00000468600 CD46P15529 392 aa9.76□□□□□ -0.85
SSB-208ENST00000468600 KDM4AO75164 1064 aa9.75□□□□□ -0.85
SSB-208ENST00000468600 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
SSB-208ENST00000468600 HLA-CQ95604 372 aa9.74□□□□□ -0.85
SSB-208ENST00000468600 WASF2Q9Y6W5 498 aa9.74□□□□□ -0.85
SSB-208ENST00000468600 USP46P62068 366 aa9.73□□□□□ -0.85
SSB-208ENST00000468600 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
SSB-208ENST00000468600 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
SSB-208ENST00000468600 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
SSB-208ENST00000468600 JUNDP17535 347 aa9.7□□□□□ -0.86
SSB-208ENST00000468600 TMEM151AQ8N4L1 468 aa9.7□□□□□ -0.86
SSB-208ENST00000468600 RASSF7Q02833 373 aa9.69□□□□□ -0.86
SSB-208ENST00000468600 MRPL14Q6P1L8 145 aaKnown RBP9.69□□□□□ -0.86
SSB-208ENST00000468600 TULP1O00294 542 aaPredicted RBP9.68□□□□□ -0.86
SSB-208ENST00000468600 GDF11O95390 407 aa9.68□□□□□ -0.86
SSB-208ENST00000468600 SH3BP2P78314 561 aa9.68□□□□□ -0.86
SSB-208ENST00000468600 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
SSB-208ENST00000468600 TLL2Q9Y6L7 1015 aa9.68□□□□□ -0.86
SSB-208ENST00000468600 HOXA2O43364 376 aa9.67□□□□□ -0.86
SSB-208ENST00000468600 PURBQ96QR8 312 aaKnown RBP9.67□□□□□ -0.86
SSB-208ENST00000468600 NUDT12Q9BQG2 462 aa9.65□□□□□ -0.86
SSB-208ENST00000468600 IRF6O14896 467 aa9.64□□□□□ -0.87
SSB-208ENST00000468600 TIMP2P16035 220 aa9.64□□□□□ -0.87
SSB-208ENST00000468600 GUCA2AQ02747 115 aa9.63□□□□□ -0.87
SSB-208ENST00000468600 NNTQ13423 1086 aa9.63□□□□□ -0.87
SSB-208ENST00000468600 SCARF1Q14162 830 aa9.63□□□□□ -0.87
SSB-208ENST00000468600 SYMPKQ92797 1274 aaKnown RBP9.63□□□□□ -0.87
SSB-208ENST00000468600 MINK1Q8N4C8 1332 aaPredicted RBP9.62□□□□□ -0.87
SSB-208ENST00000468600 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
SSB-208ENST00000468600 KRT76Q01546 638 aa9.62□□□□□ -0.87
SSB-208ENST00000468600 PPFIA3O75145 1194 aa9.61□□□□□ -0.87
SSB-208ENST00000468600 CLCN1P35523 988 aa9.61□□□□□ -0.87
SSB-208ENST00000468600 RETREG3Q86VR2 466 aa9.61□□□□□ -0.87
SSB-208ENST00000468600 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
SSB-208ENST00000468600 KLF16Q9BXK1 252 aaPredicted RBP9.61□□□□□ -0.87
SSB-208ENST00000468600 GPCPD1Q9NPB8 672 aa9.61□□□□□ -0.87
SSB-208ENST00000468600 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
SSB-208ENST00000468600 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
SSB-208ENST00000468600 ADH1CP00326 375 aa9.59□□□□□ -0.87
SSB-208ENST00000468600 WDR4P57081 412 aaKnown RBP9.59□□□□□ -0.87
SSB-208ENST00000468600 KRI1Q8N9T8 703 aaKnown RBP9.59□□□□□ -0.87
SSB-208ENST00000468600 CCDC102AQ96A19 550 aa9.59□□□□□ -0.87
SSB-208ENST00000468600 RNF225M0QZC1 329 aaPredicted RBP9.58□□□□□ -0.88
SSB-208ENST00000468600 FAM217BQ9NTX9 383 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms