RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 TRAPPC8Q9Y2L5 1435 aa8.06□□□□□ -1.12
PSMD6-204ENST00000467853 EIF5BO60841 1220 aaKnown RBP8.06□□□□□ -1.12
PSMD6-204ENST00000467853 PUS7Q96PZ0 661 aaKnown RBP8.06□□□□□ -1.12
PSMD6-204ENST00000467853 ZFYVE16Q7Z3T8 1539 aa8.06□□□□□ -1.12
PSMD6-204ENST00000467853 PTMSP20962 102 aa8.06□□□□□ -1.12
PSMD6-204ENST00000467853 RARSP54136 660 aaKnown RBP8.06□□□□□ -1.12
PSMD6-204ENST00000467853 KIF1BO60333 1816 aa8.06□□□□□ -1.12
PSMD6-204ENST00000467853 MYO3AQ8NEV4 1616 aa8.06□□□□□ -1.12
PSMD6-204ENST00000467853 NSD2O96028 1365 aa8.05□□□□□ -1.12
PSMD6-204ENST00000467853 PANK1Q8TE04 598 aa8.05□□□□□ -1.12
PSMD6-204ENST00000467853 TBC1D32Q96NH3 1257 aa8.05□□□□□ -1.12
PSMD6-204ENST00000467853 SPINK5Q9NQ38 1064 aaPredicted RBP8.05□□□□□ -1.12
PSMD6-204ENST00000467853 SETBP1Q9Y6X0 1596 aa8.05□□□□□ -1.12
PSMD6-204ENST00000467853 ZKSCAN2Q63HK3 967 aa8.05□□□□□ -1.12
PSMD6-204ENST00000467853 FTSJ3Q8IY81 847 aaKnown RBP8.05□□□□□ -1.12
PSMD6-204ENST00000467853 ISY1Q9ULR0 285 aaKnown RBP8.05□□□□□ -1.12
PSMD6-204ENST00000467853 VWDEQ8N2E2 1590 aa8.05□□□□□ -1.12
PSMD6-204ENST00000467853 ZCCHC11Q5TAX3 1644 aaKnown RBP8.04□□□□□ -1.12
PSMD6-204ENST00000467853 PRKCSHP14314 528 aaPredicted RBP8.04□□□□□ -1.12
PSMD6-204ENST00000467853 PNNQ9H307 717 aaKnown RBP8.04□□□□□ -1.12
PSMD6-204ENST00000467853 CHMP4BQ9H444 224 aaKnown RBP8.04□□□□□ -1.12
PSMD6-204ENST00000467853 CHD1O14646 1710 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 CFAP70Q5T0N1 1121 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 KLHL34Q8N239 644 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 USP19O94966 1318 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 ATP7AQ04656 1500 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 GOLGA6L3A6NEY3 463 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 CHMP5Q9NZZ3 219 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 PDZRN3Q9UPQ7 1066 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 ADGRL1O94910 1474 aa8.04□□□□□ -1.12
PSMD6-204ENST00000467853 KIF3BO15066 747 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 TCP11L2Q8N4U5 519 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 RPGRIP1LQ68CZ1 1315 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 ABCA6Q8N139 1617 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 USP32Q8NFA0 1604 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 CARD14Q9BXL6 1004 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 SLKQ9H2G2 1235 aaPredicted RBP8.03□□□□□ -1.12
PSMD6-204ENST00000467853 DDX11L8A8MPP1 907 aa8.03□□□□□ -1.12
PSMD6-204ENST00000467853 MVPQ14764 893 aaKnown RBP8.03□□□□□ -1.12
PSMD6-204ENST00000467853 ABCB7O75027 752 aa8.02□□□□□ -1.13
PSMD6-204ENST00000467853 HSCBQ8IWL3 235 aa8.02□□□□□ -1.13
PSMD6-204ENST00000467853 DDX19BQ9UMR2 479 aa8.02□□□□□ -1.13
PSMD6-204ENST00000467853 FANCAO15360 1455 aa8.02□□□□□ -1.13
PSMD6-204ENST00000467853 DZIP1LQ8IYY4 767 aaKnown RBP8.02□□□□□ -1.13
PSMD6-204ENST00000467853 NRXN1Q9ULB1 1477 aa8.02□□□□□ -1.13
PSMD6-204ENST00000467853 IPO8O15397 1037 aaKnown RBP8.02□□□□□ -1.13
PSMD6-204ENST00000467853 INO80Q9ULG1 1556 aaPredicted RBP8.02□□□□□ -1.13
PSMD6-204ENST00000467853 NEUROD2Q15784 382 aa8.02□□□□□ -1.13
PSMD6-204ENST00000467853 IQSEC2Q5JU85 1478 aa8.01□□□□□ -1.13
PSMD6-204ENST00000467853 AFAP1Q8N556 730 aa8.01□□□□□ -1.13
PSMD6-204ENST00000467853 ABCC11Q96J66 1382 aa8.01□□□□□ -1.13
PSMD6-204ENST00000467853 EVC2Q86UK5 1308 aa8.01□□□□□ -1.13
PSMD6-204ENST00000467853 CFAP44Q96MT7 982 aa8.01□□□□□ -1.13
PSMD6-204ENST00000467853 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
PSMD6-204ENST00000467853 C22orf23Q9BZE7 217 aa8.01□□□□□ -1.13
PSMD6-204ENST00000467853 ADGRF5Q8IZF2 1346 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 HDAC1Q13547 482 aaPredicted RBP8□□□□□ -1.13
PSMD6-204ENST00000467853 ANTXR1Q9H6X2 564 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 ZBTB4Q9P1Z0 1013 aaPredicted RBP8□□□□□ -1.13
PSMD6-204ENST00000467853 LMTK2Q8IWU2 1503 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 IFT172Q9UG01 1749 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 EFCAB6Q5THR3 1501 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 MCM4P33991 863 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 POGKQ9P215 609 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 IL16Q14005 1332 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 NLRP1Q9C000 1473 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 PCDHB15Q9Y5E8 787 aa8□□□□□ -1.13
PSMD6-204ENST00000467853 SEC24BO95487 1268 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 U2AF1L5P0DN76 240 aaPredicted RBP7.99□□□□□ -1.13
PSMD6-204ENST00000467853 MRE11P49959 708 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 U2AF1Q01081 240 aaKnown RBP eCLIP7.99□□□□□ -1.13
PSMD6-204ENST00000467853 SKOR2Q2VWA4 1001 aaPredicted RBP7.99□□□□□ -1.13
PSMD6-204ENST00000467853 GLIPR1L2Q4G1C9 344 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 C14orf93Q9H972 538 aaKnown RBP7.99□□□□□ -1.13
PSMD6-204ENST00000467853 SHPRHQ149N8 1683 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 MTHFSP49914 203 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 CIZ1Q9ULV3 898 aaPredicted RBP7.99□□□□□ -1.13
PSMD6-204ENST00000467853 DMRT2Q9Y5R5 561 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 SMC4Q9NTJ3 1288 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 KIF16BQ96L93 1317 aa7.99□□□□□ -1.13
PSMD6-204ENST00000467853 CHGAP10645 457 aaKnown RBP7.98□□□□□ -1.13
PSMD6-204ENST00000467853 GBP4Q96PP9 640 aa7.98□□□□□ -1.13
PSMD6-204ENST00000467853 RRP7AQ9Y3A4 280 aaKnown RBP7.98□□□□□ -1.13
PSMD6-204ENST00000467853 ADGRB3O60242 1522 aa7.98□□□□□ -1.13
PSMD6-204ENST00000467853 ANKRD36BQ8N2N9 1353 aa7.98□□□□□ -1.13
PSMD6-204ENST00000467853 NOS1P29475 1434 aa7.98□□□□□ -1.13
PSMD6-204ENST00000467853 ABCA9Q8IUA7 1624 aa7.98□□□□□ -1.13
PSMD6-204ENST00000467853 ZNF428Q96B54 188 aa7.98□□□□□ -1.13
PSMD6-204ENST00000467853 QRICH2Q9H0J4 1663 aa7.98□□□□□ -1.13
PSMD6-204ENST00000467853 TNNT2P45379 298 aaPredicted RBP7.97□□□□□ -1.13
PSMD6-204ENST00000467853 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
PSMD6-204ENST00000467853 MFAP1P55081 439 aaKnown RBP7.97□□□□□ -1.13
PSMD6-204ENST00000467853 TRAK2O60296 914 aa7.97□□□□□ -1.13
PSMD6-204ENST00000467853 UBE2Q2Q8WVN8 375 aa7.97□□□□□ -1.13
PSMD6-204ENST00000467853 ITPRIPQ8IWB1 547 aa7.96□□□□□ -1.13
PSMD6-204ENST00000467853 SNX21Q969T3 373 aa7.96□□□□□ -1.13
PSMD6-204ENST00000467853 SLC12A5Q9H2X9 1139 aa7.96□□□□□ -1.13
PSMD6-204ENST00000467853 ZC3H13Q5T200 1668 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms