RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 CTC1Q2NKJ3 1217 aa8.77□□□□□ -1.01
SSR3-204ENST00000467733 CYP4X1Q8N118 509 aa8.77□□□□□ -1.01
SSR3-204ENST00000467733 MSS51Q4VC12 460 aa8.76□□□□□ -1.01
SSR3-204ENST00000467733 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
SSR3-204ENST00000467733 ZBTB24O43167 697 aaPredicted RBP8.75□□□□□ -1.01
SSR3-204ENST00000467733 BRICD5Q6PL45 260 aa8.75□□□□□ -1.01
SSR3-204ENST00000467733 AXIN1O15169 862 aa8.74□□□□□ -1.01
SSR3-204ENST00000467733 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
SSR3-204ENST00000467733 Q3C1V9 767 aa8.73□□□□□ -1.01
SSR3-204ENST00000467733 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
SSR3-204ENST00000467733 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
SSR3-204ENST00000467733 GPIHBP1Q8IV16 184 aa8.72□□□□□ -1.01
SSR3-204ENST00000467733 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
SSR3-204ENST00000467733 TTC24A2A3L6 582 aaPredicted RBP8.7□□□□□ -1.02
SSR3-204ENST00000467733 RNF19BQ6ZMZ0 732 aa8.7□□□□□ -1.02
SSR3-204ENST00000467733 PHOX2BQ99453 314 aa8.7□□□□□ -1.02
SSR3-204ENST00000467733 C11orf95C9JLR9 678 aaPredicted RBP8.69□□□□□ -1.02
SSR3-204ENST00000467733 WNT7AO00755 349 aa8.69□□□□□ -1.02
SSR3-204ENST00000467733 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
SSR3-204ENST00000467733 MMP16P51512 607 aa8.68□□□□□ -1.02
SSR3-204ENST00000467733 TRIM32Q13049 653 aa8.68□□□□□ -1.02
SSR3-204ENST00000467733 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
SSR3-204ENST00000467733 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
SSR3-204ENST00000467733 ERCC6Q03468 1493 aa8.68□□□□□ -1.02
SSR3-204ENST00000467733 PLCB2Q00722 1185 aa8.67□□□□□ -1.02
SSR3-204ENST00000467733 SNIP1Q8TAD8 396 aaKnown RBP8.67□□□□□ -1.02
SSR3-204ENST00000467733 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
SSR3-204ENST00000467733 CD46P15529 392 aa8.66□□□□□ -1.02
SSR3-204ENST00000467733 WFS1O76024 890 aa8.65□□□□□ -1.02
SSR3-204ENST00000467733 KDM4AO75164 1064 aa8.64□□□□□ -1.03
SSR3-204ENST00000467733 DXOO77932 396 aaKnown RBP8.64□□□□□ -1.03
SSR3-204ENST00000467733 USP46P62068 366 aa8.64□□□□□ -1.03
SSR3-204ENST00000467733 MAP2K5Q13163 448 aa8.64□□□□□ -1.03
SSR3-204ENST00000467733 USB1Q9BQ65 265 aaKnown RBP8.64□□□□□ -1.03
SSR3-204ENST00000467733 SMPD1P17405 629 aa8.63□□□□□ -1.03
SSR3-204ENST00000467733 MRGPRX2Q96LB1 330 aa8.63□□□□□ -1.03
SSR3-204ENST00000467733 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
SSR3-204ENST00000467733 TULP1O00294 542 aaPredicted RBP8.61□□□□□ -1.03
SSR3-204ENST00000467733 ATP13A2Q9NQ11 1180 aa8.61□□□□□ -1.03
SSR3-204ENST00000467733 WNT7BP56706 349 aa8.6□□□□□ -1.03
SSR3-204ENST00000467733 NFX1Q12986 1120 aaKnown RBP8.6□□□□□ -1.03
SSR3-204ENST00000467733 THOC2Q8NI27 1593 aaKnown RBP8.58□□□□□ -1.04
SSR3-204ENST00000467733 WIPF1O43516 503 aa8.58□□□□□ -1.04
SSR3-204ENST00000467733 INSM1Q01101 510 aaPredicted RBP8.58□□□□□ -1.04
SSR3-204ENST00000467733 CCDC24Q8N4L8 307 aa8.58□□□□□ -1.04
SSR3-204ENST00000467733 KIFC2Q96AC6 838 aa8.58□□□□□ -1.04
SSR3-204ENST00000467733 TRIM47Q96LD4 638 aa8.58□□□□□ -1.04
SSR3-204ENST00000467733 J3QL48 77 aa8.57□□□□□ -1.04
SSR3-204ENST00000467733 IRF6O14896 467 aa8.57□□□□□ -1.04
SSR3-204ENST00000467733 HOXA2O43364 376 aa8.57□□□□□ -1.04
SSR3-204ENST00000467733 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
SSR3-204ENST00000467733 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
SSR3-204ENST00000467733 MDM2Q00987 491 aaPredicted RBP8.56□□□□□ -1.04
SSR3-204ENST00000467733 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
SSR3-204ENST00000467733 JUNDP17535 347 aa8.55□□□□□ -1.04
SSR3-204ENST00000467733 RC3H1Q5TC82 1133 aaKnown RBP8.55□□□□□ -1.04
SSR3-204ENST00000467733 HPS1Q92902 700 aa8.54□□□□□ -1.04
SSR3-204ENST00000467733 HLA-CQ95604 372 aa8.54□□□□□ -1.04
SSR3-204ENST00000467733 HMGXB3Q12766 1538 aa8.54□□□□□ -1.04
SSR3-204ENST00000467733 TERTO14746 1132 aaKnown RBP8.53□□□□□ -1.04
SSR3-204ENST00000467733 SNRPBP14678 240 aaKnown RBP8.53□□□□□ -1.04
SSR3-204ENST00000467733 CLCN1P35523 988 aa8.53□□□□□ -1.04
SSR3-204ENST00000467733 SKOR1P84550 965 aa8.53□□□□□ -1.04
SSR3-204ENST00000467733 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
SSR3-204ENST00000467733 NESP48681 1621 aa8.52□□□□□ -1.05
SSR3-204ENST00000467733 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
SSR3-204ENST00000467733 HAP1P54257 671 aaPredicted RBP8.51□□□□□ -1.05
SSR3-204ENST00000467733 CCDC102AQ96A19 550 aa8.51□□□□□ -1.05
SSR3-204ENST00000467733 NUDT12Q9BQG2 462 aa8.51□□□□□ -1.05
SSR3-204ENST00000467733 FAM217BQ9NTX9 383 aaPredicted RBP8.51□□□□□ -1.05
SSR3-204ENST00000467733 ALDH1A1P00352 501 aa8.5□□□□□ -1.05
SSR3-204ENST00000467733 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
SSR3-204ENST00000467733 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
SSR3-204ENST00000467733 ATAD2BQ9ULI0 1458 aa8.5□□□□□ -1.05
SSR3-204ENST00000467733 GUCA2AQ02747 115 aa8.49□□□□□ -1.05
SSR3-204ENST00000467733 EHBP1Q8NDI1 1231 aa8.49□□□□□ -1.05
SSR3-204ENST00000467733 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
SSR3-204ENST00000467733 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
SSR3-204ENST00000467733 SLC16A10Q8TF71 515 aa8.47□□□□□ -1.05
SSR3-204ENST00000467733 WASF2Q9Y6W5 498 aa8.47□□□□□ -1.05
SSR3-204ENST00000467733 LAMC3Q9Y6N6 1575 aa8.47□□□□□ -1.05
SSR3-204ENST00000467733 SMARCA4P51532 1647 aa8.47□□□□□ -1.05
SSR3-204ENST00000467733 CCNYL3P0C7X3 344 aa8.46□□□□□ -1.06
SSR3-204ENST00000467733 FDX1P10109 184 aa8.46□□□□□ -1.06
SSR3-204ENST00000467733 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.06
SSR3-204ENST00000467733 SIAH2O43255 324 aa8.45□□□□□ -1.06
SSR3-204ENST00000467733 MS4A1P11836 297 aa8.45□□□□□ -1.06
SSR3-204ENST00000467733 NPAS3Q8IXF0 933 aa8.45□□□□□ -1.06
SSR3-204ENST00000467733 FAM181BA6NEQ2 426 aa8.44□□□□□ -1.06
SSR3-204ENST00000467733 C6orf229H3BNL8 230 aa8.44□□□□□ -1.06
SSR3-204ENST00000467733 CAPN5O15484 640 aaPredicted RBP8.44□□□□□ -1.06
SSR3-204ENST00000467733 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
SSR3-204ENST00000467733 KDM2AQ9Y2K7 1162 aa8.44□□□□□ -1.06
SSR3-204ENST00000467733 PTPRNQ16849 979 aa8.43□□□□□ -1.06
SSR3-204ENST00000467733 PTCRAQ6ISU1 281 aaPredicted RBP8.43□□□□□ -1.06
SSR3-204ENST00000467733 NXF1Q9UBU9 619 aaKnown RBP8.43□□□□□ -1.06
SSR3-204ENST00000467733 SH3BP2P78314 561 aa8.42□□□□□ -1.06
SSR3-204ENST00000467733 BAZ1BQ9UIG0 1483 aaKnown RBP8.41□□□□□ -1.06
SSR3-204ENST00000467733 IRF7Q92985 503 aa8.41□□□□□ -1.06
SSR3-204ENST00000467733 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms