RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 PLEKHH1Q9ULM0 1364 aa23.02■■□□□ 1.28
HLA-C-205ENST00000466892 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
HLA-C-205ENST00000466892 C14orf37Q86TY3 774 aa23■■□□□ 1.27
HLA-C-205ENST00000466892 ADGRB2O60241 1585 aa23■■□□□ 1.27
HLA-C-205ENST00000466892 CERKQ8TCT0 537 aa22.99■■□□□ 1.27
HLA-C-205ENST00000466892 CDC42BPGQ6DT37 1551 aa22.98■■□□□ 1.27
HLA-C-205ENST00000466892 CADPS2Q86UW7 1296 aa22.97■■□□□ 1.27
HLA-C-205ENST00000466892 ST20-MTHFSA0A0A6YYL1 179 aa22.96■■□□□ 1.27
HLA-C-205ENST00000466892 ATF3P18847 181 aa22.94■■□□□ 1.26
HLA-C-205ENST00000466892 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
HLA-C-205ENST00000466892 RBM33Q96EV2 1170 aaKnown RBP22.94■■□□□ 1.26
HLA-C-205ENST00000466892 NALCNQ8IZF0 1738 aa22.94■■□□□ 1.26
HLA-C-205ENST00000466892 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.94■■□□□ 1.26
HLA-C-205ENST00000466892 TESK2Q96S53 571 aa22.93■■□□□ 1.26
HLA-C-205ENST00000466892 EVC2Q86UK5 1308 aa22.92■■□□□ 1.26
HLA-C-205ENST00000466892 MINK1Q8N4C8 1332 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-205ENST00000466892 QRICH2Q9H0J4 1663 aa22.92■■□□□ 1.26
HLA-C-205ENST00000466892 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
HLA-C-205ENST00000466892 WASLO00401 505 aaPredicted RBP22.91■■□□□ 1.26
HLA-C-205ENST00000466892 HSPA5P11021 654 aaKnown RBP22.91■■□□□ 1.26
HLA-C-205ENST00000466892 PUS7Q96PZ0 661 aaKnown RBP22.91■■□□□ 1.26
HLA-C-205ENST00000466892 ANKARQ7Z5J8 1434 aa22.9■■□□□ 1.26
HLA-C-205ENST00000466892 TOM1O60784 492 aa22.88■■□□□ 1.25
HLA-C-205ENST00000466892 TMF1P82094 1093 aa22.88■■□□□ 1.25
HLA-C-205ENST00000466892 CDCA8Q53HL2 280 aa22.88■■□□□ 1.25
HLA-C-205ENST00000466892 HIRIP3Q9BW71 556 aaPredicted RBP22.87■■□□□ 1.25
HLA-C-205ENST00000466892 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
HLA-C-205ENST00000466892 MST1RQ04912 1400 aa22.86■■□□□ 1.25
HLA-C-205ENST00000466892 CDK19Q9BWU1 502 aa22.85■■□□□ 1.25
HLA-C-205ENST00000466892 SLAIN2Q9P270 581 aa22.84■■□□□ 1.25
HLA-C-205ENST00000466892 ATAD2Q6PL18 1390 aa22.83■■□□□ 1.25
HLA-C-205ENST00000466892 C1orf167Q5SNV9 1468 aa22.83■■□□□ 1.25
HLA-C-205ENST00000466892 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
HLA-C-205ENST00000466892 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
HLA-C-205ENST00000466892 ATP7BP35670 1465 aa22.8■■□□□ 1.24
HLA-C-205ENST00000466892 UBAP1LF5GYI3 381 aa22.8■■□□□ 1.24
HLA-C-205ENST00000466892 NINLQ9Y2I6 1382 aa22.79■■□□□ 1.24
HLA-C-205ENST00000466892 CCDC61Q9Y6R9 512 aa22.79■■□□□ 1.24
HLA-C-205ENST00000466892 DISP3Q9P2K9 1392 aa22.78■■□□□ 1.24
HLA-C-205ENST00000466892 NUDT16Q96DE0 195 aaKnown RBP22.78■■□□□ 1.24
HLA-C-205ENST00000466892 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
HLA-C-205ENST00000466892 PRR36Q9H6K5 1346 aa22.76■■□□□ 1.23
HLA-C-205ENST00000466892 USP32Q8NFA0 1604 aa22.74■■□□□ 1.23
HLA-C-205ENST00000466892 PLEKHG3A1L390 1219 aa22.73■■□□□ 1.23
HLA-C-205ENST00000466892 ESCO1Q5FWF5 840 aa22.72■■□□□ 1.23
HLA-C-205ENST00000466892 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
HLA-C-205ENST00000466892 PHF8Q9UPP1 1060 aa22.71■■□□□ 1.23
HLA-C-205ENST00000466892 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
HLA-C-205ENST00000466892 KIF1AQ12756 1690 aa22.71■■□□□ 1.23
HLA-C-205ENST00000466892 NUTM2FA1L443 756 aa22.7■■□□□ 1.22
HLA-C-205ENST00000466892 TOPAZ1Q8N9V7 1692 aa22.7■■□□□ 1.22
HLA-C-205ENST00000466892 ITSN1Q15811 1721 aa22.7■■□□□ 1.22
HLA-C-205ENST00000466892 POLR3AO14802 1390 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-205ENST00000466892 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
HLA-C-205ENST00000466892 NPHP3Q7Z494 1330 aa22.68■■□□□ 1.22
HLA-C-205ENST00000466892 KIF7Q2M1P5 1343 aa22.67■■□□□ 1.22
HLA-C-205ENST00000466892 BRD4O60885 1362 aaPredicted RBP22.66■■□□□ 1.22
HLA-C-205ENST00000466892 FBXO41Q8TF61 875 aa22.66■■□□□ 1.22
HLA-C-205ENST00000466892 CABP1Q9NZU7 370 aa22.66■■□□□ 1.22
HLA-C-205ENST00000466892 ROBO1Q9Y6N7 1651 aa22.65■■□□□ 1.22
HLA-C-205ENST00000466892 PIP4K2BP78356 416 aa22.65■■□□□ 1.22
HLA-C-205ENST00000466892 ZNF692Q9BU19 519 aaPredicted RBP22.65■■□□□ 1.22
HLA-C-205ENST00000466892 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
HLA-C-205ENST00000466892 C11orf95C9JLR9 678 aaPredicted RBP22.64■■□□□ 1.21
HLA-C-205ENST00000466892 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.21
HLA-C-205ENST00000466892 AHDC1Q5TGY3 1603 aaPredicted RBP22.64■■□□□ 1.21
HLA-C-205ENST00000466892 NGDNQ8NEJ9 315 aaKnown RBP22.63■■□□□ 1.21
HLA-C-205ENST00000466892 CPSF1Q10570 1443 aaKnown RBP22.63■■□□□ 1.21
HLA-C-205ENST00000466892 ACEP12821 1306 aa22.62■■□□□ 1.21
HLA-C-205ENST00000466892 WASHC2AQ641Q2 1341 aa22.62■■□□□ 1.21
HLA-C-205ENST00000466892 TMC1Q8TDI8 760 aa22.62■■□□□ 1.21
HLA-C-205ENST00000466892 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
HLA-C-205ENST00000466892 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
HLA-C-205ENST00000466892 HDGFL2Q7Z4V5 671 aaPredicted RBP22.61■■□□□ 1.21
HLA-C-205ENST00000466892 PMFBP1Q8TBY8 1022 aa22.61■■□□□ 1.21
HLA-C-205ENST00000466892 SOS2Q07890 1332 aaPredicted RBP22.6■■□□□ 1.21
HLA-C-205ENST00000466892 FOXO3O43524 673 aa22.6■■□□□ 1.21
HLA-C-205ENST00000466892 PSME1Q06323 249 aa22.6■■□□□ 1.21
HLA-C-205ENST00000466892 SLC12A5Q9H2X9 1139 aa22.6■■□□□ 1.21
HLA-C-205ENST00000466892 NHSL1Q5SYE7 1610 aa22.59■■□□□ 1.21
HLA-C-205ENST00000466892 CD163L1Q9NR16 1453 aa22.59■■□□□ 1.21
HLA-C-205ENST00000466892 SBNO1A3KN83 1393 aa22.58■■□□□ 1.21
HLA-C-205ENST00000466892 PXDNQ92626 1479 aa22.58■■□□□ 1.2
HLA-C-205ENST00000466892 USP6P35125 1406 aa22.57■■□□□ 1.2
HLA-C-205ENST00000466892 RGPD8O14715 1765 aaPredicted RBP22.56■■□□□ 1.2
HLA-C-205ENST00000466892 A0A1W2PP64 1363 aa22.56■■□□□ 1.2
HLA-C-205ENST00000466892 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
HLA-C-205ENST00000466892 MYOM1P52179 1685 aa22.55■■□□□ 1.2
HLA-C-205ENST00000466892 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
HLA-C-205ENST00000466892 KRT28Q7Z3Y7 464 aa22.55■■□□□ 1.2
HLA-C-205ENST00000466892 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
HLA-C-205ENST00000466892 LRRC59Q96AG4 307 aaKnown RBP22.54■■□□□ 1.2
HLA-C-205ENST00000466892 EDC4Q6P2E9 1401 aaKnown RBP22.54■■□□□ 1.2
HLA-C-205ENST00000466892 SSH2Q76I76 1423 aa22.54■■□□□ 1.2
HLA-C-205ENST00000466892 TTC21AQ8NDW8 1320 aa22.53■■□□□ 1.2
HLA-C-205ENST00000466892 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
HLA-C-205ENST00000466892 COL16A1Q07092 1604 aaPredicted RBP22.5■■□□□ 1.19
HLA-C-205ENST00000466892 TNS3Q68CZ2 1445 aa22.5■■□□□ 1.19
HLA-C-205ENST00000466892 SPATA31A3Q5VYP0 1347 aa22.5■■□□□ 1.19
HLA-C-205ENST00000466892 AKAP12Q02952 1782 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms