RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MTMR14Q8NCE2 650 aa8.4□□□□□ -1.06
CDC42BPA-211ENST00000466538 ANKK1Q8NFD2 765 aa8.4□□□□□ -1.06
CDC42BPA-211ENST00000466538 LCE2DQ5TA82 110 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-211ENST00000466538 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-211ENST00000466538 POM121Q96HA1 1249 aa8.39□□□□□ -1.07
CDC42BPA-211ENST00000466538 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
CDC42BPA-211ENST00000466538 USP17L8P0C7I0 530 aa8.38□□□□□ -1.07
CDC42BPA-211ENST00000466538 PPP4CP60510 307 aa8.38□□□□□ -1.07
CDC42BPA-211ENST00000466538 GUCA2AQ02747 115 aa8.38□□□□□ -1.07
CDC42BPA-211ENST00000466538 Q3C1V9 767 aa8.38□□□□□ -1.07
CDC42BPA-211ENST00000466538 MORN1Q5T089 497 aa8.38□□□□□ -1.07
CDC42BPA-211ENST00000466538 HLA-CQ95604 372 aa8.38□□□□□ -1.07
CDC42BPA-211ENST00000466538 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
CDC42BPA-211ENST00000466538 ANKRD13DQ6ZTN6 518 aa8.37□□□□□ -1.07
CDC42BPA-211ENST00000466538 C1orf115Q9H7X2 142 aa8.37□□□□□ -1.07
CDC42BPA-211ENST00000466538 ARID3CA6NKF2 412 aa8.36□□□□□ -1.07
CDC42BPA-211ENST00000466538 TSR3Q9UJK0 312 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-211ENST00000466538 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-211ENST00000466538 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
CDC42BPA-211ENST00000466538 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
CDC42BPA-211ENST00000466538 GDPD2Q9HCC8 539 aa8.35□□□□□ -1.07
CDC42BPA-211ENST00000466538 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-211ENST00000466538 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
CDC42BPA-211ENST00000466538 ZNF777Q9ULD5 760 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-211ENST00000466538 SLC27A5Q9Y2P5 690 aa8.34□□□□□ -1.07
CDC42BPA-211ENST00000466538 CFAP99D6REC4 459 aa8.33□□□□□ -1.08
CDC42BPA-211ENST00000466538 PRR7Q8TB68 274 aa8.33□□□□□ -1.08
CDC42BPA-211ENST00000466538 WNT2BQ93097 391 aa8.33□□□□□ -1.08
CDC42BPA-211ENST00000466538 HPS5Q9UPZ3 1129 aa8.33□□□□□ -1.08
CDC42BPA-211ENST00000466538 NDUFB9Q9Y6M9 179 aa8.33□□□□□ -1.08
CDC42BPA-211ENST00000466538 PUS10Q3MIT2 529 aaKnown RBP8.32□□□□□ -1.08
CDC42BPA-211ENST00000466538 GJD4Q96KN9 370 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPA-211ENST00000466538 SERPINA10Q9UK55 444 aa8.32□□□□□ -1.08
CDC42BPA-211ENST00000466538 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-211ENST00000466538 NR1I2O75469 434 aa8.3□□□□□ -1.08
CDC42BPA-211ENST00000466538 ABL2P42684 1182 aa8.3□□□□□ -1.08
CDC42BPA-211ENST00000466538 WASHC4Q2M389 1173 aa8.3□□□□□ -1.08
CDC42BPA-211ENST00000466538 BRICD5Q6PL45 260 aa8.3□□□□□ -1.08
CDC42BPA-211ENST00000466538 SCUBE3Q8IX30 993 aa8.3□□□□□ -1.08
CDC42BPA-211ENST00000466538 TSC1Q92574 1164 aa8.3□□□□□ -1.08
CDC42BPA-211ENST00000466538 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
CDC42BPA-211ENST00000466538 BCAMP50895 628 aa8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 APLP1P51693 650 aa8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 CCDC82Q8N4S0 544 aa8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 ARID3AQ99856 593 aa8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 TRIM34Q9BYJ4 488 aa8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 PLSCR2Q9NRY7 297 aa8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 PCDHB3Q9Y5E6 796 aa8.29□□□□□ -1.08
CDC42BPA-211ENST00000466538 FMNL1O95466 1100 aaPredicted RBP8.28□□□□□ -1.08
CDC42BPA-211ENST00000466538 NYAP1Q6ZVC0 841 aa8.28□□□□□ -1.08
CDC42BPA-211ENST00000466538 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
CDC42BPA-211ENST00000466538 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
CDC42BPA-211ENST00000466538 CCDC97Q96F63 343 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-211ENST00000466538 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-211ENST00000466538 BLOC1S3Q6QNY0 202 aa8.26□□□□□ -1.09
CDC42BPA-211ENST00000466538 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
CDC42BPA-211ENST00000466538 THAP11Q96EK4 314 aa8.26□□□□□ -1.09
CDC42BPA-211ENST00000466538 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
CDC42BPA-211ENST00000466538 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
CDC42BPA-211ENST00000466538 IRF5Q13568 498 aa8.25□□□□□ -1.09
CDC42BPA-211ENST00000466538 THSD4Q6ZMP0 1018 aa8.25□□□□□ -1.09
CDC42BPA-211ENST00000466538 RNF19BQ6ZMZ0 732 aa8.25□□□□□ -1.09
CDC42BPA-211ENST00000466538 WBP1LQ9NX94 342 aa8.25□□□□□ -1.09
CDC42BPA-211ENST00000466538 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
CDC42BPA-211ENST00000466538 CALR3Q96L12 384 aaKnown RBP8.23□□□□□ -1.09
CDC42BPA-211ENST00000466538 NR6A1Q15406 480 aa8.22□□□□□ -1.09
CDC42BPA-211ENST00000466538 MSS51Q4VC12 460 aa8.22□□□□□ -1.09
CDC42BPA-211ENST00000466538 GPR37L1O60883 481 aa8.21□□□□□ -1.1
CDC42BPA-211ENST00000466538 JUNDP17535 347 aa8.21□□□□□ -1.1
CDC42BPA-211ENST00000466538 SOX11P35716 441 aa8.21□□□□□ -1.1
CDC42BPA-211ENST00000466538 PTPRNQ16849 979 aa8.21□□□□□ -1.1
CDC42BPA-211ENST00000466538 EPS8L1Q8TE68 723 aa8.21□□□□□ -1.1
CDC42BPA-211ENST00000466538 GLMNQ92990 594 aa8.2□□□□□ -1.1
CDC42BPA-211ENST00000466538 KCTD12Q96CX2 325 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-211ENST00000466538 POM121CA8CG34 1229 aa8.19□□□□□ -1.1
CDC42BPA-211ENST00000466538 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
CDC42BPA-211ENST00000466538 SPSB2Q99619 263 aa8.19□□□□□ -1.1
CDC42BPA-211ENST00000466538 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-211ENST00000466538 MMP16P51512 607 aa8.18□□□□□ -1.1
CDC42BPA-211ENST00000466538 ZPR1O75312 459 aa8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 DXOO77932 396 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 F12P00748 615 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 COPS2P61201 443 aa8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 FAM160A2Q8N612 972 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 ALG2Q9H553 416 aa8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 EVA1BQ9NVM1 165 aa8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 FKBPLQ9UIM3 349 aa8.17□□□□□ -1.1
CDC42BPA-211ENST00000466538 VAC14Q08AM6 782 aa8.16□□□□□ -1.1
CDC42BPA-211ENST00000466538 CDAN1Q8IWY9 1227 aa8.16□□□□□ -1.1
CDC42BPA-211ENST00000466538 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
CDC42BPA-211ENST00000466538 EIF4G2P78344 907 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDC42BPA-211ENST00000466538 NR1H3Q13133 447 aa8.15□□□□□ -1.1
CDC42BPA-211ENST00000466538 ADH1BP00325 375 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 KCNH2Q12809 1159 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 SEMA3FQ13275 785 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 GPKOWQ92917 476 aaPredicted RBP eCLIP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms