RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 AHDC1Q5TGY3 1603 aaPredicted RBP17.13■□□□□ 0.33
EDEM3-204ENST00000466392 ARHGEF28Q8N1W1 1705 aaKnown RBP17.13■□□□□ 0.33
EDEM3-204ENST00000466392 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
EDEM3-204ENST00000466392 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
EDEM3-204ENST00000466392 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
EDEM3-204ENST00000466392 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
EDEM3-204ENST00000466392 KIAA1210Q9ULL0 1709 aa17.12■□□□□ 0.33
EDEM3-204ENST00000466392 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
EDEM3-204ENST00000466392 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
EDEM3-204ENST00000466392 L3MBTL2Q969R5 705 aa17.11■□□□□ 0.33
EDEM3-204ENST00000466392 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
EDEM3-204ENST00000466392 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
EDEM3-204ENST00000466392 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
EDEM3-204ENST00000466392 PCGF6Q9BYE7 350 aa17.09■□□□□ 0.33
EDEM3-204ENST00000466392 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
EDEM3-204ENST00000466392 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
EDEM3-204ENST00000466392 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
EDEM3-204ENST00000466392 POGKQ9P215 609 aa17.06■□□□□ 0.32
EDEM3-204ENST00000466392 SHPRHQ149N8 1683 aa17.05■□□□□ 0.32
EDEM3-204ENST00000466392 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
EDEM3-204ENST00000466392 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
EDEM3-204ENST00000466392 USP32Q8NFA0 1604 aa17.05■□□□□ 0.32
EDEM3-204ENST00000466392 ADGRB2O60241 1585 aa17.04■□□□□ 0.32
EDEM3-204ENST00000466392 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
EDEM3-204ENST00000466392 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
EDEM3-204ENST00000466392 JCADQ9P266 1359 aa17.02■□□□□ 0.32
EDEM3-204ENST00000466392 LRP6O75581 1613 aa17.01■□□□□ 0.31
EDEM3-204ENST00000466392 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
EDEM3-204ENST00000466392 ILDR2Q71H61 639 aa17■□□□□ 0.31
EDEM3-204ENST00000466392 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
EDEM3-204ENST00000466392 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
EDEM3-204ENST00000466392 QRICH2Q9H0J4 1663 aa16.99■□□□□ 0.31
EDEM3-204ENST00000466392 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
EDEM3-204ENST00000466392 FOXO3O43524 673 aa16.97■□□□□ 0.31
EDEM3-204ENST00000466392 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
EDEM3-204ENST00000466392 PXDNQ92626 1479 aa16.97■□□□□ 0.31
EDEM3-204ENST00000466392 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
EDEM3-204ENST00000466392 PRR36Q9H6K5 1346 aa16.96■□□□□ 0.3
EDEM3-204ENST00000466392 PNPLA6Q8IY17 1366 aa16.95■□□□□ 0.3
EDEM3-204ENST00000466392 NUTM2BA6NNL0 878 aaPredicted RBP16.95■□□□□ 0.3
EDEM3-204ENST00000466392 NUTM2EB1AL46 878 aaPredicted RBP16.95■□□□□ 0.3
EDEM3-204ENST00000466392 NUTM2AQ8IVF1 878 aaPredicted RBP16.95■□□□□ 0.3
EDEM3-204ENST00000466392 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
EDEM3-204ENST00000466392 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
EDEM3-204ENST00000466392 LRRC59Q96AG4 307 aaKnown RBP16.94■□□□□ 0.3
EDEM3-204ENST00000466392 WASLO00401 505 aaPredicted RBP16.93■□□□□ 0.3
EDEM3-204ENST00000466392 PMFBP1Q8TBY8 1022 aa16.93■□□□□ 0.3
EDEM3-204ENST00000466392 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
EDEM3-204ENST00000466392 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
EDEM3-204ENST00000466392 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
EDEM3-204ENST00000466392 NPHP3Q7Z494 1330 aa16.93■□□□□ 0.3
EDEM3-204ENST00000466392 PHF8Q9UPP1 1060 aa16.92■□□□□ 0.3
EDEM3-204ENST00000466392 ITSN1Q15811 1721 aa16.92■□□□□ 0.3
EDEM3-204ENST00000466392 COL22A1Q8NFW1 1626 aaPredicted RBP16.91■□□□□ 0.3
EDEM3-204ENST00000466392 ATP7BP35670 1465 aa16.91■□□□□ 0.3
EDEM3-204ENST00000466392 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
EDEM3-204ENST00000466392 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
EDEM3-204ENST00000466392 RALGAPBQ86X10 1494 aa16.89■□□□□ 0.29
EDEM3-204ENST00000466392 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
EDEM3-204ENST00000466392 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
EDEM3-204ENST00000466392 TRPM3Q9HCF6 1732 aaPredicted RBP16.88■□□□□ 0.29
EDEM3-204ENST00000466392 KRT28Q7Z3Y7 464 aa16.88■□□□□ 0.29
EDEM3-204ENST00000466392 EIF3AQ14152 1382 aaKnown RBP16.87■□□□□ 0.29
EDEM3-204ENST00000466392 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
EDEM3-204ENST00000466392 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
EDEM3-204ENST00000466392 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
EDEM3-204ENST00000466392 ABCA3Q99758 1704 aa16.85■□□□□ 0.29
EDEM3-204ENST00000466392 MARF1Q9Y4F3 1742 aaKnown RBP16.85■□□□□ 0.29
EDEM3-204ENST00000466392 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
EDEM3-204ENST00000466392 POTEAQ6S8J7 498 aa16.85■□□□□ 0.29
EDEM3-204ENST00000466392 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
EDEM3-204ENST00000466392 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
EDEM3-204ENST00000466392 PSME1Q06323 249 aa16.84■□□□□ 0.29
EDEM3-204ENST00000466392 SPATA31A3Q5VYP0 1347 aa16.84■□□□□ 0.29
EDEM3-204ENST00000466392 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
EDEM3-204ENST00000466392 TNS3Q68CZ2 1445 aa16.83■□□□□ 0.28
EDEM3-204ENST00000466392 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
EDEM3-204ENST00000466392 ALS2Q96Q42 1657 aa16.83■□□□□ 0.28
EDEM3-204ENST00000466392 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
EDEM3-204ENST00000466392 C8orf37Q96NL8 207 aa16.82■□□□□ 0.28
EDEM3-204ENST00000466392 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
EDEM3-204ENST00000466392 AFF2P51816 1311 aa16.8■□□□□ 0.28
EDEM3-204ENST00000466392 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
EDEM3-204ENST00000466392 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
EDEM3-204ENST00000466392 SBNO1A3KN83 1393 aa16.79■□□□□ 0.28
EDEM3-204ENST00000466392 CRYBG1Q9Y4K1 1723 aa16.79■□□□□ 0.28
EDEM3-204ENST00000466392 ACEP12821 1306 aa16.78■□□□□ 0.28
EDEM3-204ENST00000466392 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
EDEM3-204ENST00000466392 CCDC61Q9Y6R9 512 aa16.78■□□□□ 0.28
EDEM3-204ENST00000466392 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
EDEM3-204ENST00000466392 EVC2Q86UK5 1308 aa16.76■□□□□ 0.27
EDEM3-204ENST00000466392 NGLY1Q96IV0 654 aa16.76■□□□□ 0.27
EDEM3-204ENST00000466392 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
EDEM3-204ENST00000466392 ARHGEF10O15013 1369 aa16.75■□□□□ 0.27
EDEM3-204ENST00000466392 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
EDEM3-204ENST00000466392 PLEKHG3A1L390 1219 aa16.74■□□□□ 0.27
EDEM3-204ENST00000466392 ZNF772Q68DY9 489 aaPredicted RBP16.74■□□□□ 0.27
EDEM3-204ENST00000466392 CABP1Q9NZU7 370 aa16.74■□□□□ 0.27
EDEM3-204ENST00000466392 AKAP12Q02952 1782 aa16.74■□□□□ 0.27
EDEM3-204ENST00000466392 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms