RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SBNO2Q9Y2G9 1366 aa23.64■■□□□ 1.37
EXOSC3-203ENST00000465229 C11orf95C9JLR9 678 aaPredicted RBP23.61■■□□□ 1.37
EXOSC3-203ENST00000465229 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
EXOSC3-203ENST00000465229 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
EXOSC3-203ENST00000465229 TMF1P82094 1093 aa23.59■■□□□ 1.37
EXOSC3-203ENST00000465229 QRICH2Q9H0J4 1663 aa23.59■■□□□ 1.37
EXOSC3-203ENST00000465229 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.58■■□□□ 1.37
EXOSC3-203ENST00000465229 DISP3Q9P2K9 1392 aa23.57■■□□□ 1.36
EXOSC3-203ENST00000465229 LRRC7Q96NW7 1537 aa23.57■■□□□ 1.36
EXOSC3-203ENST00000465229 C14orf37Q86TY3 774 aa23.56■■□□□ 1.36
EXOSC3-203ENST00000465229 EVC2Q86UK5 1308 aa23.56■■□□□ 1.36
EXOSC3-203ENST00000465229 NCOA3Q9Y6Q9 1424 aa23.55■■□□□ 1.36
EXOSC3-203ENST00000465229 LTBP4Q8N2S1 1624 aa23.55■■□□□ 1.36
EXOSC3-203ENST00000465229 WASLO00401 505 aaPredicted RBP23.55■■□□□ 1.36
EXOSC3-203ENST00000465229 CDK19Q9BWU1 502 aa23.55■■□□□ 1.36
EXOSC3-203ENST00000465229 ADGRL3Q9HAR2 1447 aa23.54■■□□□ 1.36
EXOSC3-203ENST00000465229 C19orf44Q9H6X5 657 aa23.53■■□□□ 1.36
EXOSC3-203ENST00000465229 TULP4Q9NRJ4 1543 aa23.52■■□□□ 1.36
EXOSC3-203ENST00000465229 CABP2Q9NPB3 220 aa23.51■■□□□ 1.35
EXOSC3-203ENST00000465229 KIF7Q2M1P5 1343 aa23.51■■□□□ 1.35
EXOSC3-203ENST00000465229 WASHC2AQ641Q2 1341 aa23.51■■□□□ 1.35
EXOSC3-203ENST00000465229 CDCA8Q53HL2 280 aa23.51■■□□□ 1.35
EXOSC3-203ENST00000465229 SRPK2P78362 688 aaKnown RBP23.5■■□□□ 1.35
EXOSC3-203ENST00000465229 ADGRB2O60241 1585 aa23.49■■□□□ 1.35
EXOSC3-203ENST00000465229 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
EXOSC3-203ENST00000465229 CCDC7Q96M83 1385 aa23.49■■□□□ 1.35
EXOSC3-203ENST00000465229 NALCNQ8IZF0 1738 aa23.48■■□□□ 1.35
EXOSC3-203ENST00000465229 MIER1Q8N108 512 aa23.48■■□□□ 1.35
EXOSC3-203ENST00000465229 POLR3GLQ9BT43 218 aa23.48■■□□□ 1.35
EXOSC3-203ENST00000465229 MSH6P52701 1360 aa23.46■■□□□ 1.35
EXOSC3-203ENST00000465229 XIRP1Q702N8 1843 aaKnown RBP23.46■■□□□ 1.35
EXOSC3-203ENST00000465229 NUTM2FA1L443 756 aa23.45■■□□□ 1.34
EXOSC3-203ENST00000465229 ATF3P18847 181 aa23.44■■□□□ 1.34
EXOSC3-203ENST00000465229 NUDT16Q96DE0 195 aaKnown RBP23.44■■□□□ 1.34
EXOSC3-203ENST00000465229 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
EXOSC3-203ENST00000465229 PRR36Q9H6K5 1346 aa23.44■■□□□ 1.34
EXOSC3-203ENST00000465229 DCCP43146 1447 aa23.43■■□□□ 1.34
EXOSC3-203ENST00000465229 CADPS2Q86UW7 1296 aa23.42■■□□□ 1.34
EXOSC3-203ENST00000465229 ATAD2Q6PL18 1390 aa23.41■■□□□ 1.34
EXOSC3-203ENST00000465229 CCDC61Q9Y6R9 512 aa23.41■■□□□ 1.34
EXOSC3-203ENST00000465229 ATP7BP35670 1465 aa23.39■■□□□ 1.33
EXOSC3-203ENST00000465229 SLC12A5Q9H2X9 1139 aa23.38■■□□□ 1.33
EXOSC3-203ENST00000465229 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
EXOSC3-203ENST00000465229 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
EXOSC3-203ENST00000465229 FMN2Q9NZ56 1722 aa23.37■■□□□ 1.33
EXOSC3-203ENST00000465229 ANKARQ7Z5J8 1434 aa23.37■■□□□ 1.33
EXOSC3-203ENST00000465229 MST1RQ04912 1400 aa23.36■■□□□ 1.33
EXOSC3-203ENST00000465229 DDX10Q13206 875 aaKnown RBP23.35■■□□□ 1.33
EXOSC3-203ENST00000465229 CERKQ8TCT0 537 aa23.35■■□□□ 1.33
EXOSC3-203ENST00000465229 SLAIN2Q9P270 581 aa23.34■■□□□ 1.33
EXOSC3-203ENST00000465229 USP32Q8NFA0 1604 aa23.34■■□□□ 1.33
EXOSC3-203ENST00000465229 C1orf167Q5SNV9 1468 aa23.34■■□□□ 1.33
EXOSC3-203ENST00000465229 PLEKHG3A1L390 1219 aa23.33■■□□□ 1.33
EXOSC3-203ENST00000465229 PPIP5K1Q6PFW1 1433 aa23.33■■□□□ 1.33
EXOSC3-203ENST00000465229 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.32
EXOSC3-203ENST00000465229 ORAI2Q96SN7 254 aa23.33■■□□□ 1.32
EXOSC3-203ENST00000465229 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
EXOSC3-203ENST00000465229 PMFBP1Q8TBY8 1022 aa23.31■■□□□ 1.32
EXOSC3-203ENST00000465229 PANK3Q9H999 370 aa23.3■■□□□ 1.32
EXOSC3-203ENST00000465229 CENPBP07199 599 aaPredicted RBP23.3■■□□□ 1.32
EXOSC3-203ENST00000465229 PHF8Q9UPP1 1060 aa23.3■■□□□ 1.32
EXOSC3-203ENST00000465229 RGPD8O14715 1765 aaPredicted RBP23.28■■□□□ 1.32
EXOSC3-203ENST00000465229 IQSEC2Q5JU85 1478 aa23.28■■□□□ 1.32
EXOSC3-203ENST00000465229 MYOM1P52179 1685 aa23.27■■□□□ 1.32
EXOSC3-203ENST00000465229 ACEP12821 1306 aa23.27■■□□□ 1.32
EXOSC3-203ENST00000465229 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
EXOSC3-203ENST00000465229 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
EXOSC3-203ENST00000465229 TOPAZ1Q8N9V7 1692 aa23.26■■□□□ 1.31
EXOSC3-203ENST00000465229 NGDNQ8NEJ9 315 aaKnown RBP23.26■■□□□ 1.31
EXOSC3-203ENST00000465229 ANKRD36BQ8N2N9 1353 aa23.25■■□□□ 1.31
EXOSC3-203ENST00000465229 TOM1O60784 492 aa23.25■■□□□ 1.31
EXOSC3-203ENST00000465229 BRINP3Q76B58 766 aa23.25■■□□□ 1.31
EXOSC3-203ENST00000465229 CARD14Q9BXL6 1004 aa23.25■■□□□ 1.31
EXOSC3-203ENST00000465229 CPSF1Q10570 1443 aaKnown RBP23.24■■□□□ 1.31
EXOSC3-203ENST00000465229 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
EXOSC3-203ENST00000465229 A0A1W2PP64 1363 aa23.24■■□□□ 1.31
EXOSC3-203ENST00000465229 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
EXOSC3-203ENST00000465229 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
EXOSC3-203ENST00000465229 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
EXOSC3-203ENST00000465229 FOXO3O43524 673 aa23.22■■□□□ 1.31
EXOSC3-203ENST00000465229 ITSN1Q15811 1721 aa23.22■■□□□ 1.31
EXOSC3-203ENST00000465229 UBAP1LF5GYI3 381 aa23.22■■□□□ 1.31
EXOSC3-203ENST00000465229 KTN1Q86UP2 1357 aaKnown RBP23.19■■□□□ 1.3
EXOSC3-203ENST00000465229 PSME1Q06323 249 aa23.18■■□□□ 1.3
EXOSC3-203ENST00000465229 DDX17Q92841 729 aaKnown RBP23.18■■□□□ 1.3
EXOSC3-203ENST00000465229 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
EXOSC3-203ENST00000465229 USP6P35125 1406 aa23.16■■□□□ 1.3
EXOSC3-203ENST00000465229 PIP4K2BP78356 416 aa23.15■■□□□ 1.3
EXOSC3-203ENST00000465229 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
EXOSC3-203ENST00000465229 NPHP3Q7Z494 1330 aa23.15■■□□□ 1.3
EXOSC3-203ENST00000465229 XPCQ01831 940 aaPredicted RBP23.15■■□□□ 1.3
EXOSC3-203ENST00000465229 KRT28Q7Z3Y7 464 aa23.15■■□□□ 1.3
EXOSC3-203ENST00000465229 KIF1AQ12756 1690 aa23.14■■□□□ 1.3
EXOSC3-203ENST00000465229 EDC4Q6P2E9 1401 aaKnown RBP23.13■■□□□ 1.29
EXOSC3-203ENST00000465229 SSH2Q76I76 1423 aa23.13■■□□□ 1.29
EXOSC3-203ENST00000465229 TTC21BQ7Z4L5 1316 aa23.13■■□□□ 1.29
EXOSC3-203ENST00000465229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
EXOSC3-203ENST00000465229 AKAP12Q02952 1782 aa23.12■■□□□ 1.29
EXOSC3-203ENST00000465229 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
EXOSC3-203ENST00000465229 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms