RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
CNNM3-203ENST00000465224 NEURL4Q96JN8 1562 aa12.89□□□□□ -0.35
CNNM3-203ENST00000465224 CFAP74Q9C0B2 1584 aa12.89□□□□□ -0.35
CNNM3-203ENST00000465224 KIF1BO60333 1816 aa12.88□□□□□ -0.35
CNNM3-203ENST00000465224 NOS1P29475 1434 aa12.88□□□□□ -0.35
CNNM3-203ENST00000465224 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
CNNM3-203ENST00000465224 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
CNNM3-203ENST00000465224 NFKBIBQ15653 356 aa12.88□□□□□ -0.35
CNNM3-203ENST00000465224 RRAGDQ9NQL2 400 aaPredicted RBP12.87□□□□□ -0.35
CNNM3-203ENST00000465224 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
CNNM3-203ENST00000465224 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
CNNM3-203ENST00000465224 TMEM132EQ6IEE7 984 aa12.87□□□□□ -0.35
CNNM3-203ENST00000465224 NRXN1Q9ULB1 1477 aa12.86□□□□□ -0.35
CNNM3-203ENST00000465224 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
CNNM3-203ENST00000465224 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
CNNM3-203ENST00000465224 GGT6Q6P531 493 aa12.86□□□□□ -0.35
CNNM3-203ENST00000465224 CENPQQ7L2Z9 268 aaPredicted RBP12.86□□□□□ -0.35
CNNM3-203ENST00000465224 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
CNNM3-203ENST00000465224 DIP2BQ9P265 1576 aa12.85□□□□□ -0.35
CNNM3-203ENST00000465224 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
CNNM3-203ENST00000465224 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
CNNM3-203ENST00000465224 GLI2P10070 1586 aa12.85□□□□□ -0.35
CNNM3-203ENST00000465224 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
CNNM3-203ENST00000465224 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
CNNM3-203ENST00000465224 ZNF518AQ6AHZ1 1483 aa12.84□□□□□ -0.35
CNNM3-203ENST00000465224 NPATQ14207 1427 aa12.83□□□□□ -0.36
CNNM3-203ENST00000465224 E9PSI1 815 aa12.83□□□□□ -0.36
CNNM3-203ENST00000465224 NUTM2DQ5VT03 806 aaPredicted RBP12.83□□□□□ -0.36
CNNM3-203ENST00000465224 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
CNNM3-203ENST00000465224 ADGRB3O60242 1522 aa12.83□□□□□ -0.36
CNNM3-203ENST00000465224 LMTK2Q8IWU2 1503 aa12.83□□□□□ -0.36
CNNM3-203ENST00000465224 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
CNNM3-203ENST00000465224 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
CNNM3-203ENST00000465224 NEO1Q92859 1461 aa12.82□□□□□ -0.36
CNNM3-203ENST00000465224 POGZQ7Z3K3 1410 aa12.82□□□□□ -0.36
CNNM3-203ENST00000465224 MYO3AQ8NEV4 1616 aa12.82□□□□□ -0.36
CNNM3-203ENST00000465224 SBNO2Q9Y2G9 1366 aa12.82□□□□□ -0.36
CNNM3-203ENST00000465224 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
CNNM3-203ENST00000465224 MORC1Q86VD1 984 aa12.82□□□□□ -0.36
CNNM3-203ENST00000465224 RRP7AQ9Y3A4 280 aaKnown RBP12.82□□□□□ -0.36
CNNM3-203ENST00000465224 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
CNNM3-203ENST00000465224 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
CNNM3-203ENST00000465224 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
CNNM3-203ENST00000465224 C8orf34Q49A92 452 aa12.81□□□□□ -0.36
CNNM3-203ENST00000465224 SLC4A3P48751 1232 aa12.81□□□□□ -0.36
CNNM3-203ENST00000465224 RGS3P49796 1198 aa12.81□□□□□ -0.36
CNNM3-203ENST00000465224 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
CNNM3-203ENST00000465224 FRMPD1Q5SYB0 1578 aa12.81□□□□□ -0.36
CNNM3-203ENST00000465224 IGHDP01880 384 aa12.8□□□□□ -0.36
CNNM3-203ENST00000465224 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
CNNM3-203ENST00000465224 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
CNNM3-203ENST00000465224 SETBP1Q9Y6X0 1596 aa12.79□□□□□ -0.36
CNNM3-203ENST00000465224 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
CNNM3-203ENST00000465224 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
CNNM3-203ENST00000465224 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
CNNM3-203ENST00000465224 PPLO60437 1756 aa12.78□□□□□ -0.36
CNNM3-203ENST00000465224 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
CNNM3-203ENST00000465224 NAP1L2Q9ULW6 460 aaPredicted RBP12.78□□□□□ -0.36
CNNM3-203ENST00000465224 HECW2Q9P2P5 1572 aa12.78□□□□□ -0.36
CNNM3-203ENST00000465224 MTHFSP49914 203 aa12.77□□□□□ -0.36
CNNM3-203ENST00000465224 PRDM4Q9UKN5 801 aa12.77□□□□□ -0.36
CNNM3-203ENST00000465224 SHPRHQ149N8 1683 aa12.77□□□□□ -0.36
CNNM3-203ENST00000465224 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.36
CNNM3-203ENST00000465224 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
CNNM3-203ENST00000465224 ZC3H13Q5T200 1668 aaKnown RBP12.77□□□□□ -0.37
CNNM3-203ENST00000465224 RICTORQ6R327 1708 aa12.77□□□□□ -0.37
CNNM3-203ENST00000465224 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
CNNM3-203ENST00000465224 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
CNNM3-203ENST00000465224 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
CNNM3-203ENST00000465224 MLH3Q9UHC1 1453 aa12.76□□□□□ -0.37
CNNM3-203ENST00000465224 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
CNNM3-203ENST00000465224 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
CNNM3-203ENST00000465224 TNNQ9UQP3 1299 aa12.75□□□□□ -0.37
CNNM3-203ENST00000465224 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
CNNM3-203ENST00000465224 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
CNNM3-203ENST00000465224 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
CNNM3-203ENST00000465224 ABCC3O15438 1527 aa12.74□□□□□ -0.37
CNNM3-203ENST00000465224 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
CNNM3-203ENST00000465224 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
CNNM3-203ENST00000465224 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
CNNM3-203ENST00000465224 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
CNNM3-203ENST00000465224 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
CNNM3-203ENST00000465224 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
CNNM3-203ENST00000465224 BCL2L13Q9BXK5 485 aa12.73□□□□□ -0.37
CNNM3-203ENST00000465224 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
CNNM3-203ENST00000465224 IQSEC2Q5JU85 1478 aa12.73□□□□□ -0.37
CNNM3-203ENST00000465224 FRAT2O75474 233 aaPredicted RBP12.73□□□□□ -0.37
CNNM3-203ENST00000465224 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
CNNM3-203ENST00000465224 RLBP1P12271 317 aa12.72□□□□□ -0.37
CNNM3-203ENST00000465224 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
CNNM3-203ENST00000465224 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.37
CNNM3-203ENST00000465224 IDI1Q13907 227 aa12.71□□□□□ -0.37
CNNM3-203ENST00000465224 STK26Q9P289 416 aa12.71□□□□□ -0.37
CNNM3-203ENST00000465224 EVC2Q86UK5 1308 aa12.71□□□□□ -0.38
CNNM3-203ENST00000465224 DIP2CQ9Y2E4 1556 aa12.7□□□□□ -0.38
CNNM3-203ENST00000465224 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
CNNM3-203ENST00000465224 YEATS2Q9ULM3 1422 aa12.7□□□□□ -0.38
CNNM3-203ENST00000465224 SEC24BO95487 1268 aa12.7□□□□□ -0.38
CNNM3-203ENST00000465224 WDR63Q8IWG1 891 aa12.7□□□□□ -0.38
CNNM3-203ENST00000465224 PNNQ9H307 717 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms