RNA–Protein interactions for RNA: ENST00000464612.5

SNHG12-204, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-204ENST00000464612 PIP4K2BP78356 416 aa12.85□□□□□ -0.35
SNHG12-204ENST00000464612 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
SNHG12-204ENST00000464612 PRAM1Q96QH2 718 aa12.85□□□□□ -0.35
SNHG12-204ENST00000464612 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
SNHG12-204ENST00000464612 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
SNHG12-204ENST00000464612 RALGAPBQ86X10 1494 aa12.84□□□□□ -0.35
SNHG12-204ENST00000464612 SIRT1Q96EB6 747 aa12.83□□□□□ -0.36
SNHG12-204ENST00000464612 DCCP43146 1447 aa12.82□□□□□ -0.36
SNHG12-204ENST00000464612 ATF3P18847 181 aa12.82□□□□□ -0.36
SNHG12-204ENST00000464612 POGKQ9P215 609 aa12.82□□□□□ -0.36
SNHG12-204ENST00000464612 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
SNHG12-204ENST00000464612 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
SNHG12-204ENST00000464612 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
SNHG12-204ENST00000464612 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
SNHG12-204ENST00000464612 MST1RQ04912 1400 aa12.8□□□□□ -0.36
SNHG12-204ENST00000464612 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
SNHG12-204ENST00000464612 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
SNHG12-204ENST00000464612 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
SNHG12-204ENST00000464612 CARD11Q9BXL7 1154 aa12.79□□□□□ -0.36
SNHG12-204ENST00000464612 ROBO1Q9Y6N7 1651 aa12.79□□□□□ -0.36
SNHG12-204ENST00000464612 ADGRB2O60241 1585 aa12.78□□□□□ -0.36
SNHG12-204ENST00000464612 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
SNHG12-204ENST00000464612 FMN2Q9NZ56 1722 aa12.77□□□□□ -0.36
SNHG12-204ENST00000464612 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
SNHG12-204ENST00000464612 C1orf167Q5SNV9 1468 aa12.77□□□□□ -0.37
SNHG12-204ENST00000464612 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.37
SNHG12-204ENST00000464612 HSPA1LP34931 641 aa12.75□□□□□ -0.37
SNHG12-204ENST00000464612 BRINP3Q76B58 766 aa12.75□□□□□ -0.37
SNHG12-204ENST00000464612 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
SNHG12-204ENST00000464612 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
SNHG12-204ENST00000464612 USP32Q8NFA0 1604 aa12.73□□□□□ -0.37
SNHG12-204ENST00000464612 WASLO00401 505 aaPredicted RBP12.73□□□□□ -0.37
SNHG12-204ENST00000464612 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
SNHG12-204ENST00000464612 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
SNHG12-204ENST00000464612 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
SNHG12-204ENST00000464612 RGPD8O14715 1765 aaPredicted RBP12.71□□□□□ -0.37
SNHG12-204ENST00000464612 USP47Q96K76 1375 aa12.71□□□□□ -0.37
SNHG12-204ENST00000464612 ESCO1Q5FWF5 840 aa12.71□□□□□ -0.37
SNHG12-204ENST00000464612 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
SNHG12-204ENST00000464612 PHLPP1O60346 1717 aa12.7□□□□□ -0.38
SNHG12-204ENST00000464612 ATP7BP35670 1465 aa12.7□□□□□ -0.38
SNHG12-204ENST00000464612 ANKARQ7Z5J8 1434 aa12.7□□□□□ -0.38
SNHG12-204ENST00000464612 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
SNHG12-204ENST00000464612 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
SNHG12-204ENST00000464612 ST20-MTHFSA0A0A6YYL1 179 aa12.69□□□□□ -0.38
SNHG12-204ENST00000464612 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
SNHG12-204ENST00000464612 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
SNHG12-204ENST00000464612 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
SNHG12-204ENST00000464612 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
SNHG12-204ENST00000464612 PMFBP1Q8TBY8 1022 aa12.67□□□□□ -0.38
SNHG12-204ENST00000464612 NUDT16Q96DE0 195 aaKnown RBP12.67□□□□□ -0.38
SNHG12-204ENST00000464612 TESK2Q96S53 571 aa12.67□□□□□ -0.38
SNHG12-204ENST00000464612 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
SNHG12-204ENST00000464612 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
SNHG12-204ENST00000464612 TOPAZ1Q8N9V7 1692 aa12.67□□□□□ -0.38
SNHG12-204ENST00000464612 EVC2Q86UK5 1308 aa12.66□□□□□ -0.38
SNHG12-204ENST00000464612 FOXO3O43524 673 aa12.66□□□□□ -0.38
SNHG12-204ENST00000464612 XPCQ01831 940 aaPredicted RBP12.66□□□□□ -0.38
SNHG12-204ENST00000464612 PXDNQ92626 1479 aa12.65□□□□□ -0.38
SNHG12-204ENST00000464612 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
SNHG12-204ENST00000464612 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
SNHG12-204ENST00000464612 NPHP3Q7Z494 1330 aa12.63□□□□□ -0.39
SNHG12-204ENST00000464612 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
SNHG12-204ENST00000464612 HSPA5P11021 654 aaKnown RBP12.63□□□□□ -0.39
SNHG12-204ENST00000464612 CCDC61Q9Y6R9 512 aa12.63□□□□□ -0.39
SNHG12-204ENST00000464612 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
SNHG12-204ENST00000464612 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNHG12-204ENST00000464612 NGDNQ8NEJ9 315 aaKnown RBP12.61□□□□□ -0.39
SNHG12-204ENST00000464612 JCADQ9P266 1359 aa12.6□□□□□ -0.39
SNHG12-204ENST00000464612 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
SNHG12-204ENST00000464612 CABP1Q9NZU7 370 aa12.6□□□□□ -0.39
SNHG12-204ENST00000464612 ACEP12821 1306 aa12.6□□□□□ -0.39
SNHG12-204ENST00000464612 POLR3AO14802 1390 aaPredicted RBP12.59□□□□□ -0.39
SNHG12-204ENST00000464612 ATAD2Q6PL18 1390 aa12.59□□□□□ -0.39
SNHG12-204ENST00000464612 PNPLA6Q8IY17 1366 aa12.59□□□□□ -0.39
SNHG12-204ENST00000464612 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
SNHG12-204ENST00000464612 PSME1Q06323 249 aa12.59□□□□□ -0.39
SNHG12-204ENST00000464612 LRRC59Q96AG4 307 aaKnown RBP12.59□□□□□ -0.39
SNHG12-204ENST00000464612 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
SNHG12-204ENST00000464612 SHPRHQ149N8 1683 aa12.58□□□□□ -0.4
SNHG12-204ENST00000464612 TMF1P82094 1093 aa12.58□□□□□ -0.4
SNHG12-204ENST00000464612 TMC1Q8TDI8 760 aa12.57□□□□□ -0.4
SNHG12-204ENST00000464612 SPATA31A3Q5VYP0 1347 aa12.57□□□□□ -0.4
SNHG12-204ENST00000464612 TNS3Q68CZ2 1445 aa12.56□□□□□ -0.4
SNHG12-204ENST00000464612 LRP6O75581 1613 aa12.56□□□□□ -0.4
SNHG12-204ENST00000464612 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
SNHG12-204ENST00000464612 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
SNHG12-204ENST00000464612 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
SNHG12-204ENST00000464612 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
SNHG12-204ENST00000464612 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
SNHG12-204ENST00000464612 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
SNHG12-204ENST00000464612 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
SNHG12-204ENST00000464612 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
SNHG12-204ENST00000464612 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
SNHG12-204ENST00000464612 USP6P35125 1406 aa12.54□□□□□ -0.4
SNHG12-204ENST00000464612 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
SNHG12-204ENST00000464612 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
SNHG12-204ENST00000464612 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
SNHG12-204ENST00000464612 C11orf95C9JLR9 678 aaPredicted RBP12.54□□□□□ -0.4
SNHG12-204ENST00000464612 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms