RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 NWD1Q149M9 1564 aa21.28■■□□□ 1
CRAT-208ENST00000464290 MINK1Q8N4C8 1332 aaPredicted RBP21.28■■□□□ 1
CRAT-208ENST00000464290 SLC24A1O60721 1099 aa21.27■■□□□ 1
CRAT-208ENST00000464290 STRCP1A6NGW2 1772 aa21.24■□□□□ 0.99
CRAT-208ENST00000464290 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
CRAT-208ENST00000464290 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.24■□□□□ 0.99
CRAT-208ENST00000464290 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
CRAT-208ENST00000464290 RBM33Q96EV2 1170 aaKnown RBP21.22■□□□□ 0.99
CRAT-208ENST00000464290 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
CRAT-208ENST00000464290 ZNF335Q9H4Z2 1342 aaPredicted RBP21.21■□□□□ 0.99
CRAT-208ENST00000464290 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.98
CRAT-208ENST00000464290 CDCA8Q53HL2 280 aa21.2■□□□□ 0.98
CRAT-208ENST00000464290 PROSER2Q86WR7 435 aaPredicted RBP21.2■□□□□ 0.98
CRAT-208ENST00000464290 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
CRAT-208ENST00000464290 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
CRAT-208ENST00000464290 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
CRAT-208ENST00000464290 CABP2Q9NPB3 220 aa21.19■□□□□ 0.98
CRAT-208ENST00000464290 PUS7Q96PZ0 661 aaKnown RBP21.17■□□□□ 0.98
CRAT-208ENST00000464290 ADGRB2O60241 1585 aa21.16■□□□□ 0.98
CRAT-208ENST00000464290 SRPK2P78362 688 aaKnown RBP21.15■□□□□ 0.98
CRAT-208ENST00000464290 TMEM94Q12767 1356 aa21.14■□□□□ 0.98
CRAT-208ENST00000464290 ADGRL3Q9HAR2 1447 aa21.12■□□□□ 0.97
CRAT-208ENST00000464290 NALCNQ8IZF0 1738 aa21.12■□□□□ 0.97
CRAT-208ENST00000464290 LRRC7Q96NW7 1537 aa21.11■□□□□ 0.97
CRAT-208ENST00000464290 C14orf37Q86TY3 774 aa21.1■□□□□ 0.97
CRAT-208ENST00000464290 NCOA3Q9Y6Q9 1424 aa21.1■□□□□ 0.97
CRAT-208ENST00000464290 PRR36Q9H6K5 1346 aa21.09■□□□□ 0.97
CRAT-208ENST00000464290 NUDT16Q96DE0 195 aaKnown RBP21.09■□□□□ 0.97
CRAT-208ENST00000464290 SLC12A5Q9H2X9 1139 aa21.09■□□□□ 0.97
CRAT-208ENST00000464290 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
CRAT-208ENST00000464290 C19orf44Q9H6X5 657 aa21.08■□□□□ 0.97
CRAT-208ENST00000464290 MYOM1P52179 1685 aa21.08■□□□□ 0.96
CRAT-208ENST00000464290 CDC42BPGQ6DT37 1551 aa21.07■□□□□ 0.96
CRAT-208ENST00000464290 NUTM2FA1L443 756 aa21.07■□□□□ 0.96
CRAT-208ENST00000464290 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
CRAT-208ENST00000464290 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
CRAT-208ENST00000464290 PANK3Q9H999 370 aa21.07■□□□□ 0.96
CRAT-208ENST00000464290 XIRP1Q702N8 1843 aaKnown RBP21.06■□□□□ 0.96
CRAT-208ENST00000464290 ATP7BP35670 1465 aa21.06■□□□□ 0.96
CRAT-208ENST00000464290 LTBP4Q8N2S1 1624 aa21.05■□□□□ 0.96
CRAT-208ENST00000464290 FMN2Q9NZ56 1722 aa21.04■□□□□ 0.96
CRAT-208ENST00000464290 CABP1Q9NZU7 370 aa21.04■□□□□ 0.96
CRAT-208ENST00000464290 CCDC61Q9Y6R9 512 aa21.04■□□□□ 0.96
CRAT-208ENST00000464290 USP32Q8NFA0 1604 aa21.04■□□□□ 0.96
CRAT-208ENST00000464290 NINLQ9Y2I6 1382 aa21.02■□□□□ 0.96
CRAT-208ENST00000464290 ANKARQ7Z5J8 1434 aa21.02■□□□□ 0.96
CRAT-208ENST00000464290 PPIP5K1Q6PFW1 1433 aa21.01■□□□□ 0.95
CRAT-208ENST00000464290 MSH6P52701 1360 aa21■□□□□ 0.95
CRAT-208ENST00000464290 PER1O15534 1290 aaPredicted RBP21■□□□□ 0.95
CRAT-208ENST00000464290 DCCP43146 1447 aa21■□□□□ 0.95
CRAT-208ENST00000464290 ATF3P18847 181 aa20.99■□□□□ 0.95
CRAT-208ENST00000464290 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
CRAT-208ENST00000464290 RGPD8O14715 1765 aaPredicted RBP20.99■□□□□ 0.95
CRAT-208ENST00000464290 CD163L1Q9NR16 1453 aa20.99■□□□□ 0.95
CRAT-208ENST00000464290 ANKRD36BQ8N2N9 1353 aa20.98■□□□□ 0.95
CRAT-208ENST00000464290 PLEKHG3A1L390 1219 aa20.98■□□□□ 0.95
CRAT-208ENST00000464290 TOPAZ1Q8N9V7 1692 aa20.98■□□□□ 0.95
CRAT-208ENST00000464290 CADPS2Q86UW7 1296 aa20.97■□□□□ 0.95
CRAT-208ENST00000464290 TERF2IPQ9NYB0 399 aa20.96■□□□□ 0.95
CRAT-208ENST00000464290 A0A1W2PP64 1363 aa20.96■□□□□ 0.95
CRAT-208ENST00000464290 MST1RQ04912 1400 aa20.95■□□□□ 0.95
CRAT-208ENST00000464290 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
CRAT-208ENST00000464290 PMFBP1Q8TBY8 1022 aa20.94■□□□□ 0.94
CRAT-208ENST00000464290 CPSF1Q10570 1443 aaKnown RBP20.94■□□□□ 0.94
CRAT-208ENST00000464290 ITSN1Q15811 1721 aa20.93■□□□□ 0.94
CRAT-208ENST00000464290 HDGFL2Q7Z4V5 671 aaPredicted RBP20.93■□□□□ 0.94
CRAT-208ENST00000464290 ACEP12821 1306 aa20.93■□□□□ 0.94
CRAT-208ENST00000464290 ESCO1Q5FWF5 840 aa20.92■□□□□ 0.94
CRAT-208ENST00000464290 ORAI2Q96SN7 254 aa20.92■□□□□ 0.94
CRAT-208ENST00000464290 PHF8Q9UPP1 1060 aa20.92■□□□□ 0.94
CRAT-208ENST00000464290 NSD3Q9BZ95 1437 aa20.91■□□□□ 0.94
CRAT-208ENST00000464290 KNSTRNQ9Y448 316 aa20.91■□□□□ 0.94
CRAT-208ENST00000464290 POLR3AO14802 1390 aaPredicted RBP20.9■□□□□ 0.94
CRAT-208ENST00000464290 AMER1Q5JTC6 1135 aaPredicted RBP20.9■□□□□ 0.94
CRAT-208ENST00000464290 KTN1Q86UP2 1357 aaKnown RBP20.89■□□□□ 0.93
CRAT-208ENST00000464290 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
CRAT-208ENST00000464290 ZNF692Q9BU19 519 aaPredicted RBP20.89■□□□□ 0.93
CRAT-208ENST00000464290 AKAP12Q02952 1782 aa20.88■□□□□ 0.93
CRAT-208ENST00000464290 SLAIN2Q9P270 581 aa20.88■□□□□ 0.93
CRAT-208ENST00000464290 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
CRAT-208ENST00000464290 MON2Q7Z3U7 1717 aa20.86■□□□□ 0.93
CRAT-208ENST00000464290 ANP32CO43423 234 aa20.85■□□□□ 0.93
CRAT-208ENST00000464290 MIER1Q8N108 512 aa20.85■□□□□ 0.93
CRAT-208ENST00000464290 USP6P35125 1406 aa20.85■□□□□ 0.93
CRAT-208ENST00000464290 CC2D1BQ5T0F9 858 aaKnown RBP20.84■□□□□ 0.93
CRAT-208ENST00000464290 EDC4Q6P2E9 1401 aaKnown RBP20.84■□□□□ 0.93
CRAT-208ENST00000464290 SSH2Q76I76 1423 aa20.84■□□□□ 0.93
CRAT-208ENST00000464290 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
CRAT-208ENST00000464290 PRKRIP1Q9H875 184 aaPredicted RBP20.83■□□□□ 0.93
CRAT-208ENST00000464290 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
CRAT-208ENST00000464290 TTC21BQ7Z4L5 1316 aa20.82■□□□□ 0.92
CRAT-208ENST00000464290 FOXO3O43524 673 aa20.82■□□□□ 0.92
CRAT-208ENST00000464290 BRINP3Q76B58 766 aa20.82■□□□□ 0.92
CRAT-208ENST00000464290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.82■□□□□ 0.92
CRAT-208ENST00000464290 KIF1AQ12756 1690 aa20.81■□□□□ 0.92
CRAT-208ENST00000464290 FYB1O15117 783 aa20.81■□□□□ 0.92
CRAT-208ENST00000464290 PSME1Q06323 249 aa20.8■□□□□ 0.92
CRAT-208ENST00000464290 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
CRAT-208ENST00000464290 CERKQ8TCT0 537 aa20.79■□□□□ 0.92
CRAT-208ENST00000464290 DDX17Q92841 729 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms