RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 PROSER2Q86WR7 435 aaPredicted RBP20.97■□□□□ 0.95
ABCF3-204ENST00000463685 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.95■□□□□ 0.94
ABCF3-204ENST00000463685 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
ABCF3-204ENST00000463685 NKTRP30414 1462 aaKnown RBP20.94■□□□□ 0.94
ABCF3-204ENST00000463685 SBNO2Q9Y2G9 1366 aa20.94■□□□□ 0.94
ABCF3-204ENST00000463685 TMF1P82094 1093 aa20.93■□□□□ 0.94
ABCF3-204ENST00000463685 WASHC2AQ641Q2 1341 aa20.93■□□□□ 0.94
ABCF3-204ENST00000463685 TULP4Q9NRJ4 1543 aa20.93■□□□□ 0.94
ABCF3-204ENST00000463685 KIF7Q2M1P5 1343 aa20.92■□□□□ 0.94
ABCF3-204ENST00000463685 TMEM94Q12767 1356 aa20.9■□□□□ 0.94
ABCF3-204ENST00000463685 CCDC7Q96M83 1385 aa20.9■□□□□ 0.94
ABCF3-204ENST00000463685 C14orf37Q86TY3 774 aa20.9■□□□□ 0.94
ABCF3-204ENST00000463685 EVC2Q86UK5 1308 aa20.89■□□□□ 0.93
ABCF3-204ENST00000463685 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
ABCF3-204ENST00000463685 CABP2Q9NPB3 220 aa20.89■□□□□ 0.93
ABCF3-204ENST00000463685 NALCNQ8IZF0 1738 aa20.88■□□□□ 0.93
ABCF3-204ENST00000463685 LRRC7Q96NW7 1537 aa20.88■□□□□ 0.93
ABCF3-204ENST00000463685 WASLO00401 505 aaPredicted RBP20.87■□□□□ 0.93
ABCF3-204ENST00000463685 SRPK2P78362 688 aaKnown RBP20.86■□□□□ 0.93
ABCF3-204ENST00000463685 ADGRL3Q9HAR2 1447 aa20.86■□□□□ 0.93
ABCF3-204ENST00000463685 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
ABCF3-204ENST00000463685 NUTM2FA1L443 756 aa20.85■□□□□ 0.93
ABCF3-204ENST00000463685 XIRP1Q702N8 1843 aaKnown RBP20.84■□□□□ 0.93
ABCF3-204ENST00000463685 SLC24A1O60721 1099 aa20.84■□□□□ 0.93
ABCF3-204ENST00000463685 LTBP4Q8N2S1 1624 aa20.84■□□□□ 0.93
ABCF3-204ENST00000463685 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
ABCF3-204ENST00000463685 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
ABCF3-204ENST00000463685 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
ABCF3-204ENST00000463685 C19orf44Q9H6X5 657 aa20.79■□□□□ 0.92
ABCF3-204ENST00000463685 CDC42BPGQ6DT37 1551 aa20.79■□□□□ 0.92
ABCF3-204ENST00000463685 NCOA3Q9Y6Q9 1424 aa20.78■□□□□ 0.92
ABCF3-204ENST00000463685 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
ABCF3-204ENST00000463685 NUDT16Q96DE0 195 aaKnown RBP20.78■□□□□ 0.92
ABCF3-204ENST00000463685 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
ABCF3-204ENST00000463685 MSH6P52701 1360 aa20.76■□□□□ 0.91
ABCF3-204ENST00000463685 USP32Q8NFA0 1604 aa20.76■□□□□ 0.91
ABCF3-204ENST00000463685 PUS7Q96PZ0 661 aaKnown RBP20.76■□□□□ 0.91
ABCF3-204ENST00000463685 SLC12A5Q9H2X9 1139 aa20.76■□□□□ 0.91
ABCF3-204ENST00000463685 MYOM1P52179 1685 aa20.76■□□□□ 0.91
ABCF3-204ENST00000463685 ATP7BP35670 1465 aa20.75■□□□□ 0.91
ABCF3-204ENST00000463685 ATAD2Q6PL18 1390 aa20.75■□□□□ 0.91
ABCF3-204ENST00000463685 ATF3P18847 181 aa20.75■□□□□ 0.91
ABCF3-204ENST00000463685 CABP1Q9NZU7 370 aa20.74■□□□□ 0.91
ABCF3-204ENST00000463685 RGPD8O14715 1765 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-204ENST00000463685 PPIP5K1Q6PFW1 1433 aa20.72■□□□□ 0.91
ABCF3-204ENST00000463685 PANK3Q9H999 370 aa20.71■□□□□ 0.91
ABCF3-204ENST00000463685 CCDC61Q9Y6R9 512 aa20.71■□□□□ 0.91
ABCF3-204ENST00000463685 DCCP43146 1447 aa20.7■□□□□ 0.9
ABCF3-204ENST00000463685 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.9
ABCF3-204ENST00000463685 MST1RQ04912 1400 aa20.7■□□□□ 0.9
ABCF3-204ENST00000463685 CADPS2Q86UW7 1296 aa20.69■□□□□ 0.9
ABCF3-204ENST00000463685 PMFBP1Q8TBY8 1022 aa20.69■□□□□ 0.9
ABCF3-204ENST00000463685 TOPAZ1Q8N9V7 1692 aa20.69■□□□□ 0.9
ABCF3-204ENST00000463685 C1orf167Q5SNV9 1468 aa20.68■□□□□ 0.9
ABCF3-204ENST00000463685 ESCO1Q5FWF5 840 aa20.67■□□□□ 0.9
ABCF3-204ENST00000463685 ORAI2Q96SN7 254 aa20.67■□□□□ 0.9
ABCF3-204ENST00000463685 CD163L1Q9NR16 1453 aa20.67■□□□□ 0.9
ABCF3-204ENST00000463685 ITSN1Q15811 1721 aa20.65■□□□□ 0.9
ABCF3-204ENST00000463685 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
ABCF3-204ENST00000463685 PLEKHG3A1L390 1219 aa20.65■□□□□ 0.9
ABCF3-204ENST00000463685 A0A1W2PP64 1363 aa20.64■□□□□ 0.89
ABCF3-204ENST00000463685 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
ABCF3-204ENST00000463685 PHF8Q9UPP1 1060 aa20.64■□□□□ 0.89
ABCF3-204ENST00000463685 ANKRD36BQ8N2N9 1353 aa20.63■□□□□ 0.89
ABCF3-204ENST00000463685 ACEP12821 1306 aa20.63■□□□□ 0.89
ABCF3-204ENST00000463685 SLAIN2Q9P270 581 aa20.63■□□□□ 0.89
ABCF3-204ENST00000463685 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
ABCF3-204ENST00000463685 HDGFL2Q7Z4V5 671 aaPredicted RBP20.62■□□□□ 0.89
ABCF3-204ENST00000463685 NGDNQ8NEJ9 315 aaKnown RBP20.62■□□□□ 0.89
ABCF3-204ENST00000463685 TERF2IPQ9NYB0 399 aa20.62■□□□□ 0.89
ABCF3-204ENST00000463685 CNGB1Q14028 1251 aaPredicted RBP20.61■□□□□ 0.89
ABCF3-204ENST00000463685 CERKQ8TCT0 537 aa20.61■□□□□ 0.89
ABCF3-204ENST00000463685 CPSF1Q10570 1443 aaKnown RBP20.61■□□□□ 0.89
ABCF3-204ENST00000463685 NSD3Q9BZ95 1437 aa20.6■□□□□ 0.89
ABCF3-204ENST00000463685 KTN1Q86UP2 1357 aaKnown RBP20.59■□□□□ 0.89
ABCF3-204ENST00000463685 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
ABCF3-204ENST00000463685 POLR3AO14802 1390 aaPredicted RBP20.59■□□□□ 0.89
ABCF3-204ENST00000463685 BRINP3Q76B58 766 aa20.58■□□□□ 0.89
ABCF3-204ENST00000463685 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
ABCF3-204ENST00000463685 AKAP12Q02952 1782 aa20.58■□□□□ 0.89
ABCF3-204ENST00000463685 FOXO3O43524 673 aa20.57■□□□□ 0.88
ABCF3-204ENST00000463685 XPCQ01831 940 aaPredicted RBP20.57■□□□□ 0.88
ABCF3-204ENST00000463685 KNSTRNQ9Y448 316 aa20.56■□□□□ 0.88
ABCF3-204ENST00000463685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.55■□□□□ 0.88
ABCF3-204ENST00000463685 MON2Q7Z3U7 1717 aa20.55■□□□□ 0.88
ABCF3-204ENST00000463685 KIF1AQ12756 1690 aa20.54■□□□□ 0.88
ABCF3-204ENST00000463685 USP6P35125 1406 aa20.54■□□□□ 0.88
ABCF3-204ENST00000463685 UBAP1LF5GYI3 381 aa20.54■□□□□ 0.88
ABCF3-204ENST00000463685 PSME1Q06323 249 aa20.54■□□□□ 0.88
ABCF3-204ENST00000463685 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-204ENST00000463685 PIP4K2BP78356 416 aa20.53■□□□□ 0.88
ABCF3-204ENST00000463685 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
ABCF3-204ENST00000463685 TOM1O60784 492 aa20.52■□□□□ 0.88
ABCF3-204ENST00000463685 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
ABCF3-204ENST00000463685 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
ABCF3-204ENST00000463685 EDC4Q6P2E9 1401 aaKnown RBP20.52■□□□□ 0.87
ABCF3-204ENST00000463685 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.87
ABCF3-204ENST00000463685 KRT28Q7Z3Y7 464 aa20.51■□□□□ 0.87
ABCF3-204ENST00000463685 NRKQ7Z2Y5 1582 aa20.51■□□□□ 0.87
ABCF3-204ENST00000463685 NME9Q86XW9 330 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms