RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SAFB2Q14151 953 aaKnown RBP eCLIP19.55■□□□□ 0.72
PHACTR4-203ENST00000463428 RBM33Q96EV2 1170 aaKnown RBP19.55■□□□□ 0.72
PHACTR4-203ENST00000463428 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
PHACTR4-203ENST00000463428 NCOA3Q9Y6Q9 1424 aa19.53■□□□□ 0.72
PHACTR4-203ENST00000463428 TMEM94Q12767 1356 aa19.53■□□□□ 0.72
PHACTR4-203ENST00000463428 MINK1Q8N4C8 1332 aaPredicted RBP19.51■□□□□ 0.71
PHACTR4-203ENST00000463428 NALCNQ8IZF0 1738 aa19.51■□□□□ 0.71
PHACTR4-203ENST00000463428 ADGRB2O60241 1585 aa19.5■□□□□ 0.71
PHACTR4-203ENST00000463428 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
PHACTR4-203ENST00000463428 TULP4Q9NRJ4 1543 aa19.48■□□□□ 0.71
PHACTR4-203ENST00000463428 C11orf95C9JLR9 678 aaPredicted RBP19.47■□□□□ 0.71
PHACTR4-203ENST00000463428 SLC24A1O60721 1099 aa19.47■□□□□ 0.71
PHACTR4-203ENST00000463428 C19orf44Q9H6X5 657 aa19.46■□□□□ 0.71
PHACTR4-203ENST00000463428 DISP3Q9P2K9 1392 aa19.46■□□□□ 0.71
PHACTR4-203ENST00000463428 WASLO00401 505 aaPredicted RBP19.45■□□□□ 0.7
PHACTR4-203ENST00000463428 CDC42BPGQ6DT37 1551 aa19.45■□□□□ 0.7
PHACTR4-203ENST00000463428 TMF1P82094 1093 aa19.44■□□□□ 0.7
PHACTR4-203ENST00000463428 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
PHACTR4-203ENST00000463428 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
PHACTR4-203ENST00000463428 C14orf37Q86TY3 774 aa19.42■□□□□ 0.7
PHACTR4-203ENST00000463428 DCCP43146 1447 aa19.42■□□□□ 0.7
PHACTR4-203ENST00000463428 FMN2Q9NZ56 1722 aa19.42■□□□□ 0.7
PHACTR4-203ENST00000463428 PUS7Q96PZ0 661 aaKnown RBP19.42■□□□□ 0.7
PHACTR4-203ENST00000463428 MSH6P52701 1360 aa19.41■□□□□ 0.7
PHACTR4-203ENST00000463428 CABP2Q9NPB3 220 aa19.4■□□□□ 0.7
PHACTR4-203ENST00000463428 USP32Q8NFA0 1604 aa19.38■□□□□ 0.69
PHACTR4-203ENST00000463428 KIF7Q2M1P5 1343 aa19.38■□□□□ 0.69
PHACTR4-203ENST00000463428 PRR36Q9H6K5 1346 aa19.38■□□□□ 0.69
PHACTR4-203ENST00000463428 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
PHACTR4-203ENST00000463428 RGPD8O14715 1765 aaPredicted RBP19.38■□□□□ 0.69
PHACTR4-203ENST00000463428 WASHC2AQ641Q2 1341 aa19.37■□□□□ 0.69
PHACTR4-203ENST00000463428 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
PHACTR4-203ENST00000463428 CCDC7Q96M83 1385 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 ATF3P18847 181 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 SRPK2P78362 688 aaKnown RBP19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 CERKQ8TCT0 537 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 ATP7BP35670 1465 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 MST1RQ04912 1400 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
PHACTR4-203ENST00000463428 NUDT16Q96DE0 195 aaKnown RBP19.35■□□□□ 0.69
PHACTR4-203ENST00000463428 NUTM2FA1L443 756 aa19.34■□□□□ 0.69
PHACTR4-203ENST00000463428 ATAD2Q6PL18 1390 aa19.33■□□□□ 0.69
PHACTR4-203ENST00000463428 TOPAZ1Q8N9V7 1692 aa19.33■□□□□ 0.68
PHACTR4-203ENST00000463428 C1orf167Q5SNV9 1468 aa19.33■□□□□ 0.68
PHACTR4-203ENST00000463428 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
PHACTR4-203ENST00000463428 MYOM1P52179 1685 aa19.32■□□□□ 0.68
PHACTR4-203ENST00000463428 SLAIN2Q9P270 581 aa19.3■□□□□ 0.68
PHACTR4-203ENST00000463428 ITSN1Q15811 1721 aa19.3■□□□□ 0.68
PHACTR4-203ENST00000463428 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
PHACTR4-203ENST00000463428 ORAI2Q96SN7 254 aa19.28■□□□□ 0.68
PHACTR4-203ENST00000463428 POLR3GLQ9BT43 218 aa19.28■□□□□ 0.68
PHACTR4-203ENST00000463428 SLC12A5Q9H2X9 1139 aa19.28■□□□□ 0.68
PHACTR4-203ENST00000463428 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
PHACTR4-203ENST00000463428 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
PHACTR4-203ENST00000463428 NINLQ9Y2I6 1382 aa19.26■□□□□ 0.67
PHACTR4-203ENST00000463428 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
PHACTR4-203ENST00000463428 ESCO1Q5FWF5 840 aa19.25■□□□□ 0.67
PHACTR4-203ENST00000463428 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
PHACTR4-203ENST00000463428 PHF8Q9UPP1 1060 aa19.25■□□□□ 0.67
PHACTR4-203ENST00000463428 TOM1O60784 492 aa19.24■□□□□ 0.67
PHACTR4-203ENST00000463428 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
PHACTR4-203ENST00000463428 PMFBP1Q8TBY8 1022 aa19.24■□□□□ 0.67
PHACTR4-203ENST00000463428 POLR3AO14802 1390 aaPredicted RBP19.23■□□□□ 0.67
PHACTR4-203ENST00000463428 CPSF1Q10570 1443 aaKnown RBP19.23■□□□□ 0.67
PHACTR4-203ENST00000463428 KIF1AQ12756 1690 aa19.23■□□□□ 0.67
PHACTR4-203ENST00000463428 AKAP12Q02952 1782 aa19.22■□□□□ 0.67
PHACTR4-203ENST00000463428 ACEP12821 1306 aa19.22■□□□□ 0.67
PHACTR4-203ENST00000463428 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
PHACTR4-203ENST00000463428 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
PHACTR4-203ENST00000463428 ROBO1Q9Y6N7 1651 aa19.19■□□□□ 0.66
PHACTR4-203ENST00000463428 DDX10Q13206 875 aaKnown RBP19.19■□□□□ 0.66
PHACTR4-203ENST00000463428 PANK3Q9H999 370 aa19.19■□□□□ 0.66
PHACTR4-203ENST00000463428 A0A1W2PP64 1363 aa19.19■□□□□ 0.66
PHACTR4-203ENST00000463428 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
PHACTR4-203ENST00000463428 CARD14Q9BXL6 1004 aa19.18■□□□□ 0.66
PHACTR4-203ENST00000463428 TERF2IPQ9NYB0 399 aa19.18■□□□□ 0.66
PHACTR4-203ENST00000463428 MON2Q7Z3U7 1717 aa19.18■□□□□ 0.66
PHACTR4-203ENST00000463428 FOXO3O43524 673 aa19.17■□□□□ 0.66
PHACTR4-203ENST00000463428 NGDNQ8NEJ9 315 aaKnown RBP19.17■□□□□ 0.66
PHACTR4-203ENST00000463428 PER1O15534 1290 aaPredicted RBP19.17■□□□□ 0.66
PHACTR4-203ENST00000463428 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
PHACTR4-203ENST00000463428 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
PHACTR4-203ENST00000463428 NHSL1Q5SYE7 1610 aa19.16■□□□□ 0.66
PHACTR4-203ENST00000463428 USP6P35125 1406 aa19.16■□□□□ 0.66
PHACTR4-203ENST00000463428 DDX17Q92841 729 aaKnown RBP19.16■□□□□ 0.66
PHACTR4-203ENST00000463428 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
PHACTR4-203ENST00000463428 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
PHACTR4-203ENST00000463428 NRKQ7Z2Y5 1582 aa19.14■□□□□ 0.65
PHACTR4-203ENST00000463428 PXDNQ92626 1479 aa19.13■□□□□ 0.65
PHACTR4-203ENST00000463428 NPHP3Q7Z494 1330 aa19.13■□□□□ 0.65
PHACTR4-203ENST00000463428 PSME1Q06323 249 aa19.13■□□□□ 0.65
PHACTR4-203ENST00000463428 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
PHACTR4-203ENST00000463428 TRPM3Q9HCF6 1732 aaPredicted RBP19.13■□□□□ 0.65
PHACTR4-203ENST00000463428 AHDC1Q5TGY3 1603 aaPredicted RBP19.12■□□□□ 0.65
PHACTR4-203ENST00000463428 EDC4Q6P2E9 1401 aaKnown RBP19.12■□□□□ 0.65
PHACTR4-203ENST00000463428 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
PHACTR4-203ENST00000463428 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
PHACTR4-203ENST00000463428 NSD3Q9BZ95 1437 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms