RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PXDNQ92626 1479 aa23.81■■□□□ 1.4
SND1-203ENST00000463020 ATRNO75882 1429 aa23.8■■□□□ 1.4
SND1-203ENST00000463020 HFM1A2PYH4 1435 aa23.79■■□□□ 1.4
SND1-203ENST00000463020 XPCQ01831 940 aaPredicted RBP23.79■■□□□ 1.4
SND1-203ENST00000463020 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
SND1-203ENST00000463020 FNBP4Q8N3X1 1017 aaPredicted RBP23.78■■□□□ 1.4
SND1-203ENST00000463020 ADGRF5Q8IZF2 1346 aa23.77■■□□□ 1.4
SND1-203ENST00000463020 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
SND1-203ENST00000463020 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
SND1-203ENST00000463020 SLC4A1APQ9BWU0 796 aaKnown RBP23.75■■□□□ 1.39
SND1-203ENST00000463020 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
SND1-203ENST00000463020 TRPC5Q9UL62 973 aaPredicted RBP23.74■■□□□ 1.39
SND1-203ENST00000463020 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
SND1-203ENST00000463020 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
SND1-203ENST00000463020 NUTM2FA1L443 756 aa23.73■■□□□ 1.39
SND1-203ENST00000463020 WAPLQ7Z5K2 1190 aa23.73■■□□□ 1.39
SND1-203ENST00000463020 FOXO3O43524 673 aa23.72■■□□□ 1.39
SND1-203ENST00000463020 STK26Q9P289 416 aa23.71■■□□□ 1.39
SND1-203ENST00000463020 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
SND1-203ENST00000463020 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
SND1-203ENST00000463020 MARF1Q9Y4F3 1742 aaKnown RBP23.69■■□□□ 1.38
SND1-203ENST00000463020 TECPR2O15040 1411 aa23.68■■□□□ 1.38
SND1-203ENST00000463020 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
SND1-203ENST00000463020 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
SND1-203ENST00000463020 RGL3Q3MIN7 710 aa23.66■■□□□ 1.38
SND1-203ENST00000463020 LRPPRCP42704 1394 aaKnown RBP23.65■■□□□ 1.38
SND1-203ENST00000463020 GLI3P10071 1580 aa23.64■■□□□ 1.37
SND1-203ENST00000463020 FMN2Q9NZ56 1722 aa23.64■■□□□ 1.37
SND1-203ENST00000463020 KNDC1Q76NI1 1749 aa23.63■■□□□ 1.37
SND1-203ENST00000463020 PIK3C2GO75747 1445 aa23.62■■□□□ 1.37
SND1-203ENST00000463020 GJD4Q96KN9 370 aaPredicted RBP23.62■■□□□ 1.37
SND1-203ENST00000463020 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
SND1-203ENST00000463020 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
SND1-203ENST00000463020 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
SND1-203ENST00000463020 SLIT2O94813 1529 aa23.6■■□□□ 1.37
SND1-203ENST00000463020 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.6■■□□□ 1.37
SND1-203ENST00000463020 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
SND1-203ENST00000463020 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.36
SND1-203ENST00000463020 USP32Q8NFA0 1604 aa23.57■■□□□ 1.36
SND1-203ENST00000463020 ANKRD30BQ9BXX2 1392 aa23.56■■□□□ 1.36
SND1-203ENST00000463020 RGPD8O14715 1765 aaPredicted RBP23.55■■□□□ 1.36
SND1-203ENST00000463020 UNC5CLQ8IV45 518 aa23.55■■□□□ 1.36
SND1-203ENST00000463020 CABLES1Q8TDN4 633 aa23.55■■□□□ 1.36
SND1-203ENST00000463020 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
SND1-203ENST00000463020 BRWD3Q6RI45 1802 aa23.54■■□□□ 1.36
SND1-203ENST00000463020 KIF1AQ12756 1690 aa23.54■■□□□ 1.36
SND1-203ENST00000463020 PLEKHG5O94827 1062 aa23.54■■□□□ 1.36
SND1-203ENST00000463020 ZRANB1Q9UGI0 708 aa23.54■■□□□ 1.36
SND1-203ENST00000463020 KRT28Q7Z3Y7 464 aa23.53■■□□□ 1.36
SND1-203ENST00000463020 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
SND1-203ENST00000463020 ABCA3Q99758 1704 aa23.5■■□□□ 1.35
SND1-203ENST00000463020 DEFB132Q7Z7B7 95 aa23.5■■□□□ 1.35
SND1-203ENST00000463020 NRXN1Q9ULB1 1477 aa23.49■■□□□ 1.35
SND1-203ENST00000463020 PLCH1Q4KWH8 1693 aa23.49■■□□□ 1.35
SND1-203ENST00000463020 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
SND1-203ENST00000463020 CFAP70Q5T0N1 1121 aa23.48■■□□□ 1.35
SND1-203ENST00000463020 CCDC125Q86Z20 511 aa23.47■■□□□ 1.35
SND1-203ENST00000463020 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
SND1-203ENST00000463020 PHF8Q9UPP1 1060 aa23.47■■□□□ 1.35
SND1-203ENST00000463020 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
SND1-203ENST00000463020 SEPT12Q8IYM1 358 aa23.46■■□□□ 1.35
SND1-203ENST00000463020 PRAM1Q96QH2 718 aa23.44■■□□□ 1.34
SND1-203ENST00000463020 VPS72Q15906 364 aa23.43■■□□□ 1.34
SND1-203ENST00000463020 SIRT1Q96EB6 747 aa23.43■■□□□ 1.34
SND1-203ENST00000463020 SBNO1A3KN83 1393 aa23.41■■□□□ 1.34
SND1-203ENST00000463020 FAM83GA6ND36 823 aa23.41■■□□□ 1.34
SND1-203ENST00000463020 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
SND1-203ENST00000463020 NWD2Q9ULI1 1742 aa23.41■■□□□ 1.34
SND1-203ENST00000463020 NRAPQ86VF7 1730 aa23.39■■□□□ 1.34
SND1-203ENST00000463020 TRPM3Q9HCF6 1732 aaPredicted RBP23.39■■□□□ 1.34
SND1-203ENST00000463020 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
SND1-203ENST00000463020 HAP1P54257 671 aaPredicted RBP23.39■■□□□ 1.33
SND1-203ENST00000463020 LMOD2Q6P5Q4 547 aa23.39■■□□□ 1.33
SND1-203ENST00000463020 ADGRB1O14514 1584 aa23.39■■□□□ 1.33
SND1-203ENST00000463020 DHX57Q6P158 1386 aaKnown RBP23.38■■□□□ 1.33
SND1-203ENST00000463020 PSME1Q06323 249 aa23.37■■□□□ 1.33
SND1-203ENST00000463020 ADGRB2O60241 1585 aa23.36■■□□□ 1.33
SND1-203ENST00000463020 HIRIP3Q9BW71 556 aaPredicted RBP23.36■■□□□ 1.33
SND1-203ENST00000463020 CCDC9Q9Y3X0 531 aaKnown RBP23.36■■□□□ 1.33
SND1-203ENST00000463020 DLC1Q96QB1 1528 aa23.36■■□□□ 1.33
SND1-203ENST00000463020 PRR36Q9H6K5 1346 aa23.35■■□□□ 1.33
SND1-203ENST00000463020 KRT27Q7Z3Y8 459 aa23.35■■□□□ 1.33
SND1-203ENST00000463020 ARHGEF10O15013 1369 aa23.35■■□□□ 1.33
SND1-203ENST00000463020 ALS2Q96Q42 1657 aa23.34■■□□□ 1.33
SND1-203ENST00000463020 ANKARQ7Z5J8 1434 aa23.33■■□□□ 1.33
SND1-203ENST00000463020 FAM98CQ17RN3 349 aaKnown RBP23.31■■□□□ 1.32
SND1-203ENST00000463020 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
SND1-203ENST00000463020 CRYBG1Q9Y4K1 1723 aa23.3■■□□□ 1.32
SND1-203ENST00000463020 PSDA5PKW4 1024 aaPredicted RBP23.3■■□□□ 1.32
SND1-203ENST00000463020 BTG4Q9NY30 223 aa23.3■■□□□ 1.32
SND1-203ENST00000463020 POGKQ9P215 609 aa23.3■■□□□ 1.32
SND1-203ENST00000463020 TRAK1Q9UPV9 953 aa23.3■■□□□ 1.32
SND1-203ENST00000463020 MINK1Q8N4C8 1332 aaPredicted RBP23.3■■□□□ 1.32
SND1-203ENST00000463020 LRP5O75197 1615 aa23.28■■□□□ 1.32
SND1-203ENST00000463020 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
SND1-203ENST00000463020 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
SND1-203ENST00000463020 COL14A1Q05707 1796 aaKnown RBP23.27■■□□□ 1.32
SND1-203ENST00000463020 A0A0G2JS52 829 aa23.26■■□□□ 1.31
SND1-203ENST00000463020 MYT1Q01538 1121 aa23.26■■□□□ 1.31
SND1-203ENST00000463020 TULP4Q9NRJ4 1543 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms