RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
KDM3A-208ENST00000463013 KIFC2Q96AC6 838 aa8.98□□□□□ -0.97
KDM3A-208ENST00000463013 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
KDM3A-208ENST00000463013 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
KDM3A-208ENST00000463013 SALL2Q9Y467 1007 aaPredicted RBP8.97□□□□□ -0.97
KDM3A-208ENST00000463013 WNT7AO00755 349 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 MORN1Q5T089 497 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 SLC16A10Q8TF71 515 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 ATP13A2Q9NQ11 1180 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 RDH13Q8NBN7 331 aa8.95□□□□□ -0.98
KDM3A-208ENST00000463013 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
KDM3A-208ENST00000463013 THAP11Q96EK4 314 aa8.94□□□□□ -0.98
KDM3A-208ENST00000463013 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
KDM3A-208ENST00000463013 DAXXQ9UER7 740 aaPredicted RBP8.93□□□□□ -0.98
KDM3A-208ENST00000463013 MINK1Q8N4C8 1332 aaPredicted RBP8.93□□□□□ -0.98
KDM3A-208ENST00000463013 IRF6O14896 467 aa8.92□□□□□ -0.98
KDM3A-208ENST00000463013 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
KDM3A-208ENST00000463013 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
KDM3A-208ENST00000463013 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
KDM3A-208ENST00000463013 SMPD1P17405 629 aa8.91□□□□□ -0.98
KDM3A-208ENST00000463013 FUT2Q10981 343 aa8.91□□□□□ -0.98
KDM3A-208ENST00000463013 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
KDM3A-208ENST00000463013 FAM160A2Q8N612 972 aaPredicted RBP8.91□□□□□ -0.98
KDM3A-208ENST00000463013 KRI1Q8N9T8 703 aaKnown RBP8.91□□□□□ -0.98
KDM3A-208ENST00000463013 MSS51Q4VC12 460 aa8.9□□□□□ -0.98
KDM3A-208ENST00000463013 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
KDM3A-208ENST00000463013 SLC27A5Q9Y2P5 690 aa8.9□□□□□ -0.98
KDM3A-208ENST00000463013 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
KDM3A-208ENST00000463013 TRIM32Q13049 653 aa8.88□□□□□ -0.99
KDM3A-208ENST00000463013 Q3C1V9 767 aa8.88□□□□□ -0.99
KDM3A-208ENST00000463013 DDX11L8A8MPP1 907 aa8.87□□□□□ -0.99
KDM3A-208ENST00000463013 GCGRP47871 477 aa8.87□□□□□ -0.99
KDM3A-208ENST00000463013 TPRNQ4KMQ1 711 aa8.87□□□□□ -0.99
KDM3A-208ENST00000463013 NPAS3Q8IXF0 933 aa8.86□□□□□ -0.99
KDM3A-208ENST00000463013 MRGPRX2Q96LB1 330 aa8.86□□□□□ -0.99
KDM3A-208ENST00000463013 PHOX2BQ99453 314 aa8.86□□□□□ -0.99
KDM3A-208ENST00000463013 AK7Q96M32 723 aa8.85□□□□□ -0.99
KDM3A-208ENST00000463013 SLC24A3Q9HC58 644 aa8.85□□□□□ -0.99
KDM3A-208ENST00000463013 J3QL48 77 aa8.84□□□□□ -0.99
KDM3A-208ENST00000463013 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
KDM3A-208ENST00000463013 IRF7Q92985 503 aa8.84□□□□□ -0.99
KDM3A-208ENST00000463013 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
KDM3A-208ENST00000463013 PRDM9Q9NQV7 894 aa8.83□□□□□ -1
KDM3A-208ENST00000463013 NLRP7Q8WX94 980 aa8.82□□□□□ -1
KDM3A-208ENST00000463013 MMP16P51512 607 aa8.81□□□□□ -1
KDM3A-208ENST00000463013 HPS1Q92902 700 aa8.81□□□□□ -1
KDM3A-208ENST00000463013 TRIM66O15016 1216 aa8.8□□□□□ -1
KDM3A-208ENST00000463013 WNT7BP56706 349 aa8.8□□□□□ -1
KDM3A-208ENST00000463013 AMHR2Q16671 573 aa8.79□□□□□ -1
KDM3A-208ENST00000463013 LCE2CQ5TA81 110 aa8.79□□□□□ -1
KDM3A-208ENST00000463013 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
KDM3A-208ENST00000463013 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
KDM3A-208ENST00000463013 PRKCSHP14314 528 aaPredicted RBP8.77□□□□□ -1.01
KDM3A-208ENST00000463013 CLCN1P35523 988 aa8.77□□□□□ -1.01
KDM3A-208ENST00000463013 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
KDM3A-208ENST00000463013 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
KDM3A-208ENST00000463013 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 GMPRP36959 345 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 CCDC24Q8N4L8 307 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 GPCPD1Q9NPB8 672 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
KDM3A-208ENST00000463013 TTLL12Q14166 644 aaPredicted RBP8.75□□□□□ -1.01
KDM3A-208ENST00000463013 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
KDM3A-208ENST00000463013 PDE4DQ08499 809 aa8.74□□□□□ -1.01
KDM3A-208ENST00000463013 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
KDM3A-208ENST00000463013 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
KDM3A-208ENST00000463013 WASF2Q9Y6W5 498 aa8.73□□□□□ -1.01
KDM3A-208ENST00000463013 CAPN5O15484 640 aaPredicted RBP8.72□□□□□ -1.01
KDM3A-208ENST00000463013 FAM217BQ9NTX9 383 aaPredicted RBP8.72□□□□□ -1.01
KDM3A-208ENST00000463013 H3BM21 787 aa8.71□□□□□ -1.02
KDM3A-208ENST00000463013 USP46P62068 366 aa8.71□□□□□ -1.02
KDM3A-208ENST00000463013 GIGYF2Q6Y7W6 1299 aaKnown RBP8.71□□□□□ -1.02
KDM3A-208ENST00000463013 KDM4AO75164 1064 aa8.69□□□□□ -1.02
KDM3A-208ENST00000463013 CD46P15529 392 aa8.69□□□□□ -1.02
KDM3A-208ENST00000463013 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
KDM3A-208ENST00000463013 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
KDM3A-208ENST00000463013 SKOR1P84550 965 aa8.68□□□□□ -1.02
KDM3A-208ENST00000463013 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
KDM3A-208ENST00000463013 MS4A1P11836 297 aa8.65□□□□□ -1.02
KDM3A-208ENST00000463013 BMP1P13497 986 aa8.65□□□□□ -1.02
KDM3A-208ENST00000463013 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
KDM3A-208ENST00000463013 SIAH2O43255 324 aa8.64□□□□□ -1.03
KDM3A-208ENST00000463013 VEGFBP49765 207 aa8.64□□□□□ -1.03
KDM3A-208ENST00000463013 SCARF1Q14162 830 aa8.64□□□□□ -1.03
KDM3A-208ENST00000463013 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
KDM3A-208ENST00000463013 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
KDM3A-208ENST00000463013 JUNDP17535 347 aa8.63□□□□□ -1.03
KDM3A-208ENST00000463013 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
KDM3A-208ENST00000463013 PLEKHG3A1L390 1219 aa8.62□□□□□ -1.03
KDM3A-208ENST00000463013 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
KDM3A-208ENST00000463013 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
KDM3A-208ENST00000463013 ZFP42Q96MM3 310 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 NUDT12Q9BQG2 462 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
KDM3A-208ENST00000463013 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
KDM3A-208ENST00000463013 HOXA2O43364 376 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms