RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
CDC42BPA-210ENST00000462553 CDC42BPGQ6DT37 1551 aa12.03□□□□□ -0.48
CDC42BPA-210ENST00000462553 AFF2P51816 1311 aa12.03□□□□□ -0.48
CDC42BPA-210ENST00000462553 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
CDC42BPA-210ENST00000462553 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-210ENST00000462553 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-210ENST00000462553 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-210ENST00000462553 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-210ENST00000462553 RXRBP28702 533 aa11.99□□□□□ -0.49
CDC42BPA-210ENST00000462553 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-210ENST00000462553 FMN2Q9NZ56 1722 aa11.98□□□□□ -0.49
CDC42BPA-210ENST00000462553 PXDNQ92626 1479 aa11.98□□□□□ -0.49
CDC42BPA-210ENST00000462553 SOS2Q07890 1332 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-210ENST00000462553 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-210ENST00000462553 MYOM2P54296 1465 aa11.97□□□□□ -0.49
CDC42BPA-210ENST00000462553 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
CDC42BPA-210ENST00000462553 RGPD8O14715 1765 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-210ENST00000462553 TECPR2O15040 1411 aa11.96□□□□□ -0.49
CDC42BPA-210ENST00000462553 SPATA31E1Q6ZUB1 1445 aa11.96□□□□□ -0.49
CDC42BPA-210ENST00000462553 ORAI2Q96SN7 254 aa11.96□□□□□ -0.49
CDC42BPA-210ENST00000462553 RPGRIP1LQ68CZ1 1315 aa11.95□□□□□ -0.5
CDC42BPA-210ENST00000462553 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-210ENST00000462553 KIF1AQ12756 1690 aa11.94□□□□□ -0.5
CDC42BPA-210ENST00000462553 ABCA3Q99758 1704 aa11.94□□□□□ -0.5
CDC42BPA-210ENST00000462553 ATRNO75882 1429 aa11.94□□□□□ -0.5
CDC42BPA-210ENST00000462553 RBM6P78332 1123 aaKnown RBP11.93□□□□□ -0.5
CDC42BPA-210ENST00000462553 POTEHQ6S545 545 aa11.93□□□□□ -0.5
CDC42BPA-210ENST00000462553 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
CDC42BPA-210ENST00000462553 PIK3C2GO75747 1445 aa11.93□□□□□ -0.5
CDC42BPA-210ENST00000462553 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
CDC42BPA-210ENST00000462553 ADAMTS2O95450 1211 aa11.92□□□□□ -0.5
CDC42BPA-210ENST00000462553 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-210ENST00000462553 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
CDC42BPA-210ENST00000462553 CCDC144AA2RUR9 1427 aa11.91□□□□□ -0.5
CDC42BPA-210ENST00000462553 LRPPRCP42704 1394 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-210ENST00000462553 PLEKHH1Q9ULM0 1364 aa11.91□□□□□ -0.5
CDC42BPA-210ENST00000462553 BCL9LQ86UU0 1499 aa11.9□□□□□ -0.5
CDC42BPA-210ENST00000462553 USP32Q8NFA0 1604 aa11.9□□□□□ -0.5
CDC42BPA-210ENST00000462553 PLCH1Q4KWH8 1693 aa11.9□□□□□ -0.5
CDC42BPA-210ENST00000462553 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
CDC42BPA-210ENST00000462553 GLI3P10071 1580 aa11.89□□□□□ -0.51
CDC42BPA-210ENST00000462553 CAPN15O75808 1086 aa11.89□□□□□ -0.51
CDC42BPA-210ENST00000462553 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-210ENST00000462553 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
CDC42BPA-210ENST00000462553 NPHP3Q7Z494 1330 aa11.88□□□□□ -0.51
CDC42BPA-210ENST00000462553 USP21Q9UK80 565 aa11.88□□□□□ -0.51
CDC42BPA-210ENST00000462553 ABCC11Q96J66 1382 aa11.88□□□□□ -0.51
CDC42BPA-210ENST00000462553 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
CDC42BPA-210ENST00000462553 YTHDC2Q9H6S0 1430 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-210ENST00000462553 NWD2Q9ULI1 1742 aa11.87□□□□□ -0.51
CDC42BPA-210ENST00000462553 ATAD2Q6PL18 1390 aa11.87□□□□□ -0.51
CDC42BPA-210ENST00000462553 SLIT2O94813 1529 aa11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 WAPLQ7Z5K2 1190 aa11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 TRPC5Q9UL62 973 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 ADGRB2O60241 1585 aa11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 TRPM3Q9HCF6 1732 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-210ENST00000462553 NRAPQ86VF7 1730 aa11.85□□□□□ -0.51
CDC42BPA-210ENST00000462553 CRYBG1Q9Y4K1 1723 aa11.84□□□□□ -0.51
CDC42BPA-210ENST00000462553 FOXO3O43524 673 aa11.84□□□□□ -0.51
CDC42BPA-210ENST00000462553 DSG3P32926 999 aa11.84□□□□□ -0.51
CDC42BPA-210ENST00000462553 RGL3Q3MIN7 710 aa11.84□□□□□ -0.51
CDC42BPA-210ENST00000462553 TMEM132EQ6IEE7 984 aa11.84□□□□□ -0.51
CDC42BPA-210ENST00000462553 MPHOSPH9Q99550 1183 aa11.84□□□□□ -0.51
CDC42BPA-210ENST00000462553 STK26Q9P289 416 aa11.84□□□□□ -0.51
CDC42BPA-210ENST00000462553 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
CDC42BPA-210ENST00000462553 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
CDC42BPA-210ENST00000462553 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
CDC42BPA-210ENST00000462553 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
CDC42BPA-210ENST00000462553 TNS3Q68CZ2 1445 aa11.83□□□□□ -0.52
CDC42BPA-210ENST00000462553 ADGRB1O14514 1584 aa11.83□□□□□ -0.52
CDC42BPA-210ENST00000462553 SPATA31A3Q5VYP0 1347 aa11.82□□□□□ -0.52
CDC42BPA-210ENST00000462553 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
CDC42BPA-210ENST00000462553 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-210ENST00000462553 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-210ENST00000462553 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-210ENST00000462553 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-210ENST00000462553 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
CDC42BPA-210ENST00000462553 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.52
CDC42BPA-210ENST00000462553 CFAP70Q5T0N1 1121 aa11.77□□□□□ -0.53
CDC42BPA-210ENST00000462553 UNC5CLQ8IV45 518 aa11.77□□□□□ -0.53
CDC42BPA-210ENST00000462553 SBNO1A3KN83 1393 aa11.77□□□□□ -0.53
CDC42BPA-210ENST00000462553 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
CDC42BPA-210ENST00000462553 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-210ENST00000462553 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
CDC42BPA-210ENST00000462553 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
CDC42BPA-210ENST00000462553 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-210ENST00000462553 BLMP54132 1417 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-210ENST00000462553 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
CDC42BPA-210ENST00000462553 PHRF1Q9P1Y6 1649 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-210ENST00000462553 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
CDC42BPA-210ENST00000462553 CABLES1Q8TDN4 633 aa11.74□□□□□ -0.53
CDC42BPA-210ENST00000462553 PRAM1Q96QH2 718 aa11.74□□□□□ -0.53
CDC42BPA-210ENST00000462553 ARHGEF10O15013 1369 aa11.74□□□□□ -0.53
CDC42BPA-210ENST00000462553 LRP5O75197 1615 aa11.74□□□□□ -0.53
CDC42BPA-210ENST00000462553 THSD7AQ9UPZ6 1657 aa11.74□□□□□ -0.53
CDC42BPA-210ENST00000462553 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-210ENST00000462553 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms