RNA–Protein interactions for RNA: ENST00000461830.6

RFWD2-206, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 5

Gene RFWD2, Length 2,131 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-206ENST00000461830 ABCC11Q96J66 1382 aa10.38□□□□□ -0.75
RFWD2-206ENST00000461830 SCAF1Q9H7N4 1312 aaKnown RBP10.38□□□□□ -0.75
RFWD2-206ENST00000461830 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
RFWD2-206ENST00000461830 HOMEZQ8IX15 550 aa10.37□□□□□ -0.75
RFWD2-206ENST00000461830 ADGRL3Q9HAR2 1447 aa10.37□□□□□ -0.75
RFWD2-206ENST00000461830 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
RFWD2-206ENST00000461830 C19orf44Q9H6X5 657 aa10.36□□□□□ -0.75
RFWD2-206ENST00000461830 TRAK1Q9UPV9 953 aa10.36□□□□□ -0.75
RFWD2-206ENST00000461830 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.36□□□□□ -0.75
RFWD2-206ENST00000461830 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
RFWD2-206ENST00000461830 ATF3P18847 181 aa10.36□□□□□ -0.75
RFWD2-206ENST00000461830 ILDR1Q86SU0 546 aaPredicted RBP10.36□□□□□ -0.75
RFWD2-206ENST00000461830 FAM135BQ49AJ0 1406 aa10.36□□□□□ -0.75
RFWD2-206ENST00000461830 DLC1Q96QB1 1528 aa10.35□□□□□ -0.75
RFWD2-206ENST00000461830 NBPF1Q3BBV0 1214 aa10.35□□□□□ -0.75
RFWD2-206ENST00000461830 WAPLQ7Z5K2 1190 aa10.35□□□□□ -0.75
RFWD2-206ENST00000461830 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
RFWD2-206ENST00000461830 DCCP43146 1447 aa10.34□□□□□ -0.75
RFWD2-206ENST00000461830 SIRT1Q96EB6 747 aa10.34□□□□□ -0.75
RFWD2-206ENST00000461830 POGKQ9P215 609 aa10.34□□□□□ -0.75
RFWD2-206ENST00000461830 ROCK2O75116 1388 aaKnown RBP10.34□□□□□ -0.75
RFWD2-206ENST00000461830 PLEKHH1Q9ULM0 1364 aa10.34□□□□□ -0.75
RFWD2-206ENST00000461830 NBPF8Q3BBV2 869 aa10.34□□□□□ -0.75
RFWD2-206ENST00000461830 PRAM1Q96QH2 718 aa10.34□□□□□ -0.75
RFWD2-206ENST00000461830 SAFB2Q14151 953 aaKnown RBP eCLIP10.33□□□□□ -0.764e-6■□□□□ 10.7
RFWD2-206ENST00000461830 ARHGEF28Q8N1W1 1705 aaKnown RBP10.32□□□□□ -0.76
RFWD2-206ENST00000461830 SLAIN2Q9P270 581 aa10.32□□□□□ -0.76
RFWD2-206ENST00000461830 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
RFWD2-206ENST00000461830 RALGAPBQ86X10 1494 aa10.32□□□□□ -0.76
RFWD2-206ENST00000461830 ROBO1Q9Y6N7 1651 aa10.3□□□□□ -0.76
RFWD2-206ENST00000461830 MST1RQ04912 1400 aa10.3□□□□□ -0.76
RFWD2-206ENST00000461830 TPRNQ4KMQ1 711 aa10.3□□□□□ -0.76
RFWD2-206ENST00000461830 CARD11Q9BXL7 1154 aa10.29□□□□□ -0.76
RFWD2-206ENST00000461830 MINK1Q8N4C8 1332 aaPredicted RBP10.29□□□□□ -0.76
RFWD2-206ENST00000461830 EIF3AQ14152 1382 aaKnown RBP10.29□□□□□ -0.76
RFWD2-206ENST00000461830 GPRASP1Q5JY77 1395 aa10.29□□□□□ -0.76
RFWD2-206ENST00000461830 HIRIP3Q9BW71 556 aaPredicted RBP10.28□□□□□ -0.76
RFWD2-206ENST00000461830 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
RFWD2-206ENST00000461830 CENPJQ9HC77 1338 aaPredicted RBP10.28□□□□□ -0.76
RFWD2-206ENST00000461830 C1orf167Q5SNV9 1468 aa10.27□□□□□ -0.76
RFWD2-206ENST00000461830 NUTM2FA1L443 756 aa10.27□□□□□ -0.77
RFWD2-206ENST00000461830 FMN2Q9NZ56 1722 aa10.27□□□□□ -0.77
RFWD2-206ENST00000461830 QRICH2Q9H0J4 1663 aa10.26□□□□□ -0.77
RFWD2-206ENST00000461830 HSPA1LP34931 641 aa10.26□□□□□ -0.77
RFWD2-206ENST00000461830 BRINP3Q76B58 766 aa10.26□□□□□ -0.77
RFWD2-206ENST00000461830 WASLO00401 505 aaPredicted RBP10.25□□□□□ -0.77
RFWD2-206ENST00000461830 ESCO1Q5FWF5 840 aa10.24□□□□□ -0.77
RFWD2-206ENST00000461830 PHLPP1O60346 1717 aa10.24□□□□□ -0.77
RFWD2-206ENST00000461830 TULP4Q9NRJ4 1543 aa10.24□□□□□ -0.77
RFWD2-206ENST00000461830 ORAI2Q96SN7 254 aa10.24□□□□□ -0.77
RFWD2-206ENST00000461830 ANKARQ7Z5J8 1434 aa10.23□□□□□ -0.77
RFWD2-206ENST00000461830 AHDC1Q5TGY3 1603 aaPredicted RBP10.23□□□□□ -0.77
RFWD2-206ENST00000461830 NHSL1Q5SYE7 1610 aa10.23□□□□□ -0.77
RFWD2-206ENST00000461830 USP32Q8NFA0 1604 aa10.22□□□□□ -0.77
RFWD2-206ENST00000461830 CDK19Q9BWU1 502 aa10.22□□□□□ -0.77
RFWD2-206ENST00000461830 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
RFWD2-206ENST00000461830 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.77
RFWD2-206ENST00000461830 USP47Q96K76 1375 aa10.21□□□□□ -0.78
RFWD2-206ENST00000461830 EVC2Q86UK5 1308 aa10.21□□□□□ -0.78
RFWD2-206ENST00000461830 COL16A1Q07092 1604 aaPredicted RBP10.21□□□□□ -0.78
RFWD2-206ENST00000461830 KLHL34Q8N239 644 aa10.21□□□□□ -0.78
RFWD2-206ENST00000461830 DDX17Q92841 729 aaKnown RBP10.21□□□□□ -0.78
RFWD2-206ENST00000461830 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.78
RFWD2-206ENST00000461830 RGPD8O14715 1765 aaPredicted RBP10.21□□□□□ -0.78
RFWD2-206ENST00000461830 NPHP3Q7Z494 1330 aa10.2□□□□□ -0.78
RFWD2-206ENST00000461830 PRR36Q9H6K5 1346 aa10.2□□□□□ -0.78
RFWD2-206ENST00000461830 ATP7BP35670 1465 aa10.2□□□□□ -0.78
RFWD2-206ENST00000461830 ITSN1Q15811 1721 aa10.2□□□□□ -0.78
RFWD2-206ENST00000461830 SBNO2Q9Y2G9 1366 aa10.2□□□□□ -0.78
RFWD2-206ENST00000461830 ST20-MTHFSA0A0A6YYL1 179 aa10.19□□□□□ -0.78
RFWD2-206ENST00000461830 NUDT16Q96DE0 195 aaKnown RBP10.19□□□□□ -0.78
RFWD2-206ENST00000461830 FOXO3O43524 673 aa10.19□□□□□ -0.78
RFWD2-206ENST00000461830 PMFBP1Q8TBY8 1022 aa10.19□□□□□ -0.78
RFWD2-206ENST00000461830 CABP2Q9NPB3 220 aa10.19□□□□□ -0.78
RFWD2-206ENST00000461830 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
RFWD2-206ENST00000461830 TOPAZ1Q8N9V7 1692 aa10.18□□□□□ -0.78
RFWD2-206ENST00000461830 JCADQ9P266 1359 aa10.17□□□□□ -0.78
RFWD2-206ENST00000461830 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
RFWD2-206ENST00000461830 XPCQ01831 940 aaPredicted RBP10.17□□□□□ -0.78
RFWD2-206ENST00000461830 LRRC59Q96AG4 307 aaKnown RBP10.17□□□□□ -0.78
RFWD2-206ENST00000461830 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
RFWD2-206ENST00000461830 SOS2Q07890 1332 aaPredicted RBP10.17□□□□□ -0.78
RFWD2-206ENST00000461830 PXDNQ92626 1479 aa10.17□□□□□ -0.78
RFWD2-206ENST00000461830 PSME1Q06323 249 aa10.16□□□□□ -0.78
RFWD2-206ENST00000461830 NGDNQ8NEJ9 315 aaKnown RBP10.16□□□□□ -0.78
RFWD2-206ENST00000461830 PODXL2Q9NZ53 605 aa10.16□□□□□ -0.78
RFWD2-206ENST00000461830 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
RFWD2-206ENST00000461830 EIF4G2P78344 907 aaKnown RBP eCLIP10.15□□□□□ -0.782e-11■■■■■ 48.4
RFWD2-206ENST00000461830 KRT28Q7Z3Y7 464 aa10.15□□□□□ -0.78
RFWD2-206ENST00000461830 TESK2Q96S53 571 aa10.15□□□□□ -0.78
RFWD2-206ENST00000461830 SHPRHQ149N8 1683 aa10.15□□□□□ -0.78
RFWD2-206ENST00000461830 TMF1P82094 1093 aa10.15□□□□□ -0.79
RFWD2-206ENST00000461830 GTF3C3Q9Y5Q9 886 aa10.14□□□□□ -0.79
RFWD2-206ENST00000461830 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
RFWD2-206ENST00000461830 CABP1Q9NZU7 370 aa10.13□□□□□ -0.79
RFWD2-206ENST00000461830 ACEP12821 1306 aa10.13□□□□□ -0.79
RFWD2-206ENST00000461830 POLR3AO14802 1390 aaPredicted RBP10.13□□□□□ -0.79
RFWD2-206ENST00000461830 PNPLA6Q8IY17 1366 aa10.13□□□□□ -0.79
RFWD2-206ENST00000461830 TNS3Q68CZ2 1445 aa10.13□□□□□ -0.79
RFWD2-206ENST00000461830 HSPA5P11021 654 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms