RNA–Protein interactions for RNA: ENST00000461405.1

PHF20-208, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-208ENST00000461405 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
PHF20-208ENST00000461405 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
PHF20-208ENST00000461405 MST1RQ04912 1400 aa17.34■□□□□ 0.37
PHF20-208ENST00000461405 USP32Q8NFA0 1604 aa17.32■□□□□ 0.36
PHF20-208ENST00000461405 C19orf44Q9H6X5 657 aa17.32■□□□□ 0.36
PHF20-208ENST00000461405 ROBO1Q9Y6N7 1651 aa17.32■□□□□ 0.36
PHF20-208ENST00000461405 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
PHF20-208ENST00000461405 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
PHF20-208ENST00000461405 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
PHF20-208ENST00000461405 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHF20-208ENST00000461405 FBXO41Q8TF61 875 aa17.29■□□□□ 0.36
PHF20-208ENST00000461405 CARD11Q9BXL7 1154 aa17.29■□□□□ 0.36
PHF20-208ENST00000461405 C1orf167Q5SNV9 1468 aa17.28■□□□□ 0.36
PHF20-208ENST00000461405 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
PHF20-208ENST00000461405 POGKQ9P215 609 aa17.27■□□□□ 0.36
PHF20-208ENST00000461405 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
PHF20-208ENST00000461405 TOPAZ1Q8N9V7 1692 aa17.26■□□□□ 0.35
PHF20-208ENST00000461405 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
PHF20-208ENST00000461405 TOM1O60784 492 aa17.26■□□□□ 0.35
PHF20-208ENST00000461405 CADPS2Q86UW7 1296 aa17.26■□□□□ 0.35
PHF20-208ENST00000461405 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
PHF20-208ENST00000461405 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
PHF20-208ENST00000461405 ATP7BP35670 1465 aa17.25■□□□□ 0.35
PHF20-208ENST00000461405 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
PHF20-208ENST00000461405 USP47Q96K76 1375 aa17.25■□□□□ 0.35
PHF20-208ENST00000461405 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
PHF20-208ENST00000461405 ATF3P18847 181 aa17.24■□□□□ 0.35
PHF20-208ENST00000461405 AHDC1Q5TGY3 1603 aaPredicted RBP17.23■□□□□ 0.35
PHF20-208ENST00000461405 SLAIN2Q9P270 581 aa17.23■□□□□ 0.35
PHF20-208ENST00000461405 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
PHF20-208ENST00000461405 PIP4K2BP78356 416 aa17.22■□□□□ 0.35
PHF20-208ENST00000461405 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
PHF20-208ENST00000461405 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.35
PHF20-208ENST00000461405 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
PHF20-208ENST00000461405 COL16A1Q07092 1604 aaPredicted RBP17.21■□□□□ 0.35
PHF20-208ENST00000461405 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
PHF20-208ENST00000461405 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
PHF20-208ENST00000461405 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
PHF20-208ENST00000461405 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
PHF20-208ENST00000461405 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
PHF20-208ENST00000461405 ILDR1Q86SU0 546 aaPredicted RBP17.18■□□□□ 0.34
PHF20-208ENST00000461405 TESK2Q96S53 571 aa17.18■□□□□ 0.34
PHF20-208ENST00000461405 ORAI2Q96SN7 254 aa17.17■□□□□ 0.34
PHF20-208ENST00000461405 ST20-MTHFSA0A0A6YYL1 179 aa17.16■□□□□ 0.34
PHF20-208ENST00000461405 PXDNQ92626 1479 aa17.15■□□□□ 0.34
PHF20-208ENST00000461405 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
PHF20-208ENST00000461405 DISP3Q9P2K9 1392 aa17.14■□□□□ 0.33
PHF20-208ENST00000461405 HSPA1LP34931 641 aa17.12■□□□□ 0.33
PHF20-208ENST00000461405 MYOM1P52179 1685 aa17.12■□□□□ 0.33
PHF20-208ENST00000461405 TRPM3Q9HCF6 1732 aaPredicted RBP17.12■□□□□ 0.33
PHF20-208ENST00000461405 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
PHF20-208ENST00000461405 DDX17Q92841 729 aaKnown RBP17.11■□□□□ 0.33
PHF20-208ENST00000461405 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
PHF20-208ENST00000461405 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
PHF20-208ENST00000461405 HSPA5P11021 654 aaKnown RBP17.1■□□□□ 0.33
PHF20-208ENST00000461405 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
PHF20-208ENST00000461405 PPIP5K1Q6PFW1 1433 aa17.09■□□□□ 0.33
PHF20-208ENST00000461405 SHPRHQ149N8 1683 aa17.09■□□□□ 0.33
PHF20-208ENST00000461405 AKAP12Q02952 1782 aa17.08■□□□□ 0.33
PHF20-208ENST00000461405 NRKQ7Z2Y5 1582 aa17.08■□□□□ 0.32
PHF20-208ENST00000461405 EIF4G2P78344 907 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHF20-208ENST00000461405 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
PHF20-208ENST00000461405 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
PHF20-208ENST00000461405 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
PHF20-208ENST00000461405 CD163L1Q9NR16 1453 aa17.06■□□□□ 0.32
PHF20-208ENST00000461405 ATAD2Q6PL18 1390 aa17.06■□□□□ 0.32
PHF20-208ENST00000461405 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
PHF20-208ENST00000461405 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
PHF20-208ENST00000461405 MON2Q7Z3U7 1717 aa17.06■□□□□ 0.32
PHF20-208ENST00000461405 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
PHF20-208ENST00000461405 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
PHF20-208ENST00000461405 COL22A1Q8NFW1 1626 aaPredicted RBP17.05■□□□□ 0.32
PHF20-208ENST00000461405 FOXO3O43524 673 aa17.04■□□□□ 0.32
PHF20-208ENST00000461405 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
PHF20-208ENST00000461405 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
PHF20-208ENST00000461405 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
PHF20-208ENST00000461405 ABCA3Q99758 1704 aa17.03■□□□□ 0.32
PHF20-208ENST00000461405 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
PHF20-208ENST00000461405 TMF1P82094 1093 aa17.02■□□□□ 0.32
PHF20-208ENST00000461405 PUS7Q96PZ0 661 aaKnown RBP17.02■□□□□ 0.32
PHF20-208ENST00000461405 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
PHF20-208ENST00000461405 TNS3Q68CZ2 1445 aa17.02■□□□□ 0.31
PHF20-208ENST00000461405 ACEP12821 1306 aa17.01■□□□□ 0.31
PHF20-208ENST00000461405 PNPLA6Q8IY17 1366 aa17.01■□□□□ 0.31
PHF20-208ENST00000461405 USP6P35125 1406 aa17■□□□□ 0.31
PHF20-208ENST00000461405 MED1Q15648 1581 aaPredicted RBP17■□□□□ 0.31
PHF20-208ENST00000461405 CABP1Q9NZU7 370 aa17■□□□□ 0.31
PHF20-208ENST00000461405 JCADQ9P266 1359 aa17■□□□□ 0.31
PHF20-208ENST00000461405 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
PHF20-208ENST00000461405 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
PHF20-208ENST00000461405 LRP6O75581 1613 aa16.99■□□□□ 0.31
PHF20-208ENST00000461405 PIK3C2AO00443 1686 aa16.98■□□□□ 0.31
PHF20-208ENST00000461405 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
PHF20-208ENST00000461405 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
PHF20-208ENST00000461405 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
PHF20-208ENST00000461405 NINLQ9Y2I6 1382 aa16.98■□□□□ 0.31
PHF20-208ENST00000461405 MARF1Q9Y4F3 1742 aaKnown RBP16.98■□□□□ 0.31
PHF20-208ENST00000461405 SPATA31A3Q5VYP0 1347 aa16.97■□□□□ 0.31
PHF20-208ENST00000461405 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
PHF20-208ENST00000461405 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms